Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G308400.1 | Wheat | nucleus | 99.37 | 99.37 |
| TraesCS7B01G208600.1 | Wheat | nucleus | 98.37 | 98.12 |
| HORVU7Hr1G073440.1 | Barley | nucleus | 97.61 | 97.61 |
| HORVU7Hr1G073450.1 | Barley | mitochondrion, nucleus | 95.1 | 95.1 |
| Os08t0136100-01 | Rice | nucleus | 82.54 | 83.69 |
| Zm00001d024701_P001 | Maize | nucleus | 74.25 | 74.15 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 61.43 | 74.09 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 66.71 | 73.14 |
| EES14500 | Sorghum | nucleus | 74.75 | 73.1 |
| VIT_10s0116g00680.t01 | Wine grape | nucleus | 65.95 | 72.31 |
| VIT_12s0059g02310.t01 | Wine grape | nucleus | 68.72 | 72.26 |
| PGSC0003DMT400061859 | Potato | nucleus | 61.68 | 71.26 |
| KRH56105 | Soybean | nucleus | 63.94 | 69.82 |
| TraesCS2D01G473700.1 | Wheat | nucleus | 67.84 | 69.59 |
| CDX90879 | Canola | nucleus | 62.44 | 69.41 |
| CDY21319 | Canola | nucleus | 62.31 | 69.27 |
| KRH25398 | Soybean | plastid | 66.08 | 69.12 |
| Solyc03g031760.2.1 | Tomato | cytosol | 54.52 | 69.0 |
| PGSC0003DMT400029291 | Potato | nucleus | 60.3 | 68.87 |
| KRH22554 | Soybean | nucleus | 66.71 | 67.99 |
| KRH26803 | Soybean | nucleus | 66.71 | 67.99 |
| Bra015401.1-P | Field mustard | nucleus | 61.43 | 67.92 |
| Solyc10g005330.2.1 | Tomato | nucleus | 60.68 | 67.84 |
| CDY06167 | Canola | nucleus | 61.31 | 67.78 |
| Bra032478.1-P | Field mustard | nucleus | 61.18 | 67.73 |
| AT1G05230.5 | Thale cress | nucleus | 61.31 | 67.68 |
| KRH77881 | Soybean | nucleus | 62.06 | 67.58 |
| KRH27601 | Soybean | nucleus | 61.93 | 67.35 |
| KRH13175 | Soybean | cytosol | 14.95 | 67.23 |
| GSMUA_Achr10P... | Banana | nucleus | 60.3 | 67.13 |
| CDY16639 | Canola | nucleus | 61.56 | 66.85 |
| CDX94586 | Canola | nucleus | 61.43 | 66.8 |
| CDY27417 | Canola | nucleus | 59.8 | 66.67 |
| PGSC0003DMT400005277 | Potato | nucleus | 61.31 | 66.58 |
| GSMUA_Achr11P... | Banana | plastid | 65.95 | 66.54 |
| Bra000807.1-P | Field mustard | nucleus | 49.87 | 66.5 |
| CDX76399 | Canola | nucleus | 59.67 | 66.43 |
| AT4G04890.1 | Thale cress | nucleus | 61.93 | 66.35 |
| Bra029527.1-P | Field mustard | nucleus | 61.93 | 66.17 |
| CDX98703 | Canola | nucleus | 57.54 | 65.9 |
| Solyc02g080260.2.1 | Tomato | nucleus | 62.06 | 65.78 |
| CDX94054 | Canola | nucleus | 57.41 | 65.76 |
| CDY10041 | Canola | nucleus | 61.31 | 65.33 |
| AT4G21750.3 | Thale cress | nucleus | 62.31 | 65.09 |
| CDY66622 | Canola | nucleus | 59.17 | 64.43 |
| Bra038757.1-P | Field mustard | nucleus | 57.79 | 63.45 |
| Bra020872.1-P | Field mustard | nucleus | 59.55 | 63.37 |
| CDX79091 | Canola | nucleus | 59.3 | 63.27 |
| CDY71572 | Canola | nucleus | 30.4 | 61.58 |
| Bra013556.1-P | Field mustard | nucleus | 53.27 | 61.45 |
| CDY49515 | Canola | plasma membrane | 61.81 | 60.67 |
| CDY46842 | Canola | nucleus | 61.68 | 59.16 |
| KRG91238 | Soybean | nucleus | 52.64 | 57.32 |
| CDY23096 | Canola | nucleus | 9.3 | 56.06 |
| KRH35579 | Soybean | nucleus | 52.39 | 53.6 |
| TraesCS6D01G304300.1 | Wheat | nucleus | 41.58 | 48.32 |
| TraesCS6D01G237000.1 | Wheat | nucleus | 48.24 | 47.76 |
| VIT_19s0177g00240.t01 | Wine grape | cytosol, mitochondrion | 13.32 | 44.73 |
| TraesCS7D01G169000.1 | Wheat | nucleus | 8.29 | 44.3 |
| TraesCS5D01G320600.1 | Wheat | nucleus | 46.36 | 43.46 |
| TraesCS2D01G398600.1 | Wheat | nucleus | 42.71 | 43.37 |
| TraesCS7D01G168700.1 | Wheat | nucleus | 39.7 | 43.17 |
| TraesCS7D01G168900.1 | Wheat | nucleus | 7.54 | 40.27 |
| PGSC0003DMT400037397 | Potato | cytosol | 23.24 | 37.68 |
| TraesCS1D01G197300.1 | Wheat | nucleus | 41.08 | 37.03 |
| KRH22254 | Soybean | cytosol | 24.75 | 36.82 |
| Solyc10g006420.2.1 | Tomato | cytosol | 24.12 | 36.43 |
| KRH27078 | Soybean | extracellular, golgi, peroxisome | 14.45 | 34.85 |
| TraesCS3D01G296500.3 | Wheat | nucleus | 33.79 | 33.88 |
| TraesCS4D01G228800.1 | Wheat | nucleus | 8.92 | 33.18 |
| TraesCS3D01G319200.1 | Wheat | nucleus | 27.64 | 32.21 |
| TraesCS1D01G037100.1 | Wheat | nucleus | 8.42 | 31.46 |
| TraesCS3D01G121300.1 | Wheat | nucleus | 7.91 | 30.29 |
| TraesCS5D01G335900.1 | Wheat | nucleus | 28.27 | 29.88 |
| TraesCS3D01G121500.1 | Wheat | nucleus | 8.04 | 28.7 |
| TraesCS4D01G082600.1 | Wheat | nucleus | 28.64 | 28.32 |
| TraesCS7D01G217200.1 | Wheat | nucleus | 7.66 | 27.35 |
| TraesCS3D01G121400.1 | Wheat | golgi, nucleus | 8.54 | 17.53 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom |
| InterPro:IPR001356 | InterPro:IPR002913 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 |
| PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF349 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 |
| SUPFAM:SSF55961 | InterPro:START_lipid-bd_dom | EnsemblPlantsGene:TraesCS7D01G305200 | EnsemblPlants:TraesCS7D01G305200.1 | TIGR:cd00086 | TIGR:cd08875 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:386725334..386730432
Molecular Weight (calculated)
85597.2 Da
IEP (calculated)
6.430
GRAVY (calculated)
-0.362
Length
796 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGGMMIPGR NMIGRSNGAG VAYASSSSSA LSLGQQNLMD GMHHHQLPAM LQHQMVDHHL LPQHHHHPHQ QAATSESDAR GPHGGGNNNS SNNNEELEMS
101: KSGTGSDNNL DGGEGGGGED DEQEDPAGQH PRKKKRYHRH TQHQIQELEA FFKECPHPDD KQRKELSRSL SLEPLQVKFW FQNKRTQIKT QHERQENTAL
201: RTENEKLRAE NMRYKEALAN ASCPNCGGPA AIGEMSFDEH HLRVENARLR DEIDRISAIA AKYVGGKPGA GVAVASAAYP PLPPQSSGRS ALDHLGMPSM
301: FGGAEFDKPM VIELAVAAME ELVRMAQLGE PLWVPSLDGE TLGEEEYARA FPRGALGPKS PELRSEASRE TDVVIMNHVS LVEMLMDVRQ WSALFSSIVS
401: RAATLDVLST GVAGNHDGAL QLMSAEFQMP SPLVPTRDTQ FLRYCKQHPG GAWAVVDVSL DGLRSAARVG GHFRRRASGC LIQEMPNGYS KVTWVEHVEA
501: GDDAMVHDLY RPLVNSGLAF GARRWTSTLK RQCERLASAM ATVPSSGGDV ITTAEGRRSM LKLAERMTAS FCGGVTASTT HQWTTLSGSG AEDVRVMTRK
601: SVDDPGRPPG IILNAATSFW LPVPPSRVFG FLRDDSTRSE WDILSNGGVV QEMAHIANGS HHGNAVSLLR VNNANSNQSN MLILQECCTD TTGSYVVYAP
701: VDVVAMNVVL NGGDPDYVAL LPSGFAILPD GPAGAPDAGG SLLTVAFQIL VDSVPTAKLS LGSVATVNSL IACTVDRIKA AVVVSPGDNT GAAANR
101: KSGTGSDNNL DGGEGGGGED DEQEDPAGQH PRKKKRYHRH TQHQIQELEA FFKECPHPDD KQRKELSRSL SLEPLQVKFW FQNKRTQIKT QHERQENTAL
201: RTENEKLRAE NMRYKEALAN ASCPNCGGPA AIGEMSFDEH HLRVENARLR DEIDRISAIA AKYVGGKPGA GVAVASAAYP PLPPQSSGRS ALDHLGMPSM
301: FGGAEFDKPM VIELAVAAME ELVRMAQLGE PLWVPSLDGE TLGEEEYARA FPRGALGPKS PELRSEASRE TDVVIMNHVS LVEMLMDVRQ WSALFSSIVS
401: RAATLDVLST GVAGNHDGAL QLMSAEFQMP SPLVPTRDTQ FLRYCKQHPG GAWAVVDVSL DGLRSAARVG GHFRRRASGC LIQEMPNGYS KVTWVEHVEA
501: GDDAMVHDLY RPLVNSGLAF GARRWTSTLK RQCERLASAM ATVPSSGGDV ITTAEGRRSM LKLAERMTAS FCGGVTASTT HQWTTLSGSG AEDVRVMTRK
601: SVDDPGRPPG IILNAATSFW LPVPPSRVFG FLRDDSTRSE WDILSNGGVV QEMAHIANGS HHGNAVSLLR VNNANSNQSN MLILQECCTD TTGSYVVYAP
701: VDVVAMNVVL NGGDPDYVAL LPSGFAILPD GPAGAPDAGG SLLTVAFQIL VDSVPTAKLS LGSVATVNSL IACTVDRIKA AVVVSPGDNT GAAANR
001: MFEPNMLLAA MNNADSNNHN YNHEDNNNEG FLRDDEFDSP NTKSGSENQE GGSGNDQDPL HPNKKKRYHR HTQLQIQEME AFFKECPHPD DKQRKQLSRE
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RVNSANSSQS NMLILQESCT DPTASFVIYA PVDIVAMNIV LNGGDPDYVA LLPSGFAILP DGNANSGAPG GDGGSLLTVA FQILVDSVPT AKLSLGSVAT
701: VNNLIACTVE RIKASMSCET A
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RVNSANSSQS NMLILQESCT DPTASFVIYA PVDIVAMNIV LNGGDPDYVA LLPSGFAILP DGNANSGAPG GDGGSLLTVA FQILVDSVPT AKLSLGSVAT
701: VNNLIACTVE RIKASMSCET A
Arabidopsis Description
HDG2AT1G05230 protein [Source:UniProtKB/TrEMBL;Acc:B9DFH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.