Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400061859 | Potato | nucleus | 94.59 | 86.36 |
| Os04t0627000-02 | Rice | cytosol, peroxisome | 72.02 | 77.3 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 76.95 | 73.33 |
| VIT_10s0116g00680.t01 | Wine grape | nucleus | 84.26 | 73.0 |
| Solyc10g005330.2.1 | Tomato | nucleus | 79.49 | 70.22 |
| Solyc02g080260.2.1 | Tomato | nucleus | 79.01 | 66.18 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 74.72 | 64.74 |
| EES11464 | Sorghum | nucleus | 76.63 | 61.09 |
| EES13460 | Sorghum | mitochondrion, nucleus | 74.09 | 59.67 |
| GSMUA_Achr10P... | Banana | nucleus | 67.41 | 59.3 |
| GSMUA_Achr11P... | Banana | plastid | 74.24 | 59.19 |
| Zm00001d049443_P005 | Maize | nucleus | 74.4 | 58.79 |
| TraesCS2D01G473700.1 | Wheat | nucleus | 72.02 | 58.38 |
| TraesCS2B01G497500.1 | Wheat | nucleus | 71.86 | 58.32 |
| Zm00001d002234_P003 | Maize | nucleus | 73.61 | 58.31 |
| TraesCS2A01G474000.1 | Wheat | nucleus | 71.86 | 58.17 |
| Os08t0136100-01 | Rice | nucleus | 71.38 | 57.2 |
| Zm00001d026351_P003 | Maize | nucleus | 75.36 | 56.16 |
| Zm00001d000247_P001 | Maize | plasma membrane | 64.07 | 56.05 |
| TraesCS7D01G305200.1 | Wheat | nucleus | 69.0 | 54.52 |
| TraesCS7A01G308400.1 | Wheat | nucleus | 68.84 | 54.4 |
| TraesCS7B01G208600.1 | Wheat | nucleus | 68.84 | 54.26 |
| EES14500 | Sorghum | nucleus | 70.11 | 54.18 |
| Zm00001d024701_P001 | Maize | nucleus | 68.52 | 54.08 |
| Solyc12g005830.1.1 | Tomato | nucleus | 56.44 | 47.27 |
| Solyc03g098200.2.1 | Tomato | nucleus | 49.28 | 43.0 |
| Solyc01g091630.2.1 | Tomato | nucleus | 55.17 | 42.27 |
| Solyc07g041850.1.1 | Tomato | nucleus | 44.67 | 41.32 |
| Solyc06g072310.2.1 | Tomato | nucleus | 47.06 | 41.28 |
| Solyc10g006420.2.1 | Tomato | cytosol | 32.43 | 38.71 |
| Solyc09g066070.2.1 | Tomato | cytosol | 24.17 | 35.27 |
| Solyc03g120620.2.1 | Tomato | nucleus | 43.4 | 35.23 |
| Solyc04g025490.1.1 | Tomato | cytosol | 13.2 | 34.3 |
| Solyc06g035940.2.1 | Tomato | nucleus | 36.09 | 33.58 |
| Solyc09g057530.1.1 | Tomato | cytosol | 7.31 | 33.58 |
| Solyc08g076370.2.1 | Tomato | nucleus | 44.83 | 33.49 |
| Solyc10g018030.1.1 | Tomato | cytosol | 21.94 | 33.41 |
| Solyc09g057540.2.1 | Tomato | cytosol | 26.23 | 33.2 |
| Solyc09g060170.1.1 | Tomato | cytosol | 18.12 | 33.14 |
| Solyc03g026070.2.1 | Tomato | nucleus | 42.45 | 33.09 |
| Solyc09g060140.2.1 | Tomato | mitochondrion | 19.24 | 32.88 |
| Solyc07g026560.1.1 | Tomato | cytosol | 24.48 | 32.56 |
| Solyc09g060130.1.1 | Tomato | cytosol | 22.89 | 32.43 |
| Solyc10g018020.1.1 | Tomato | extracellular | 17.01 | 31.85 |
| Solyc09g066050.2.1 | Tomato | cytosol | 27.98 | 31.83 |
| Solyc11g022420.1.1 | Tomato | cytosol | 23.85 | 31.32 |
| Solyc06g050160.2.1 | Tomato | nucleus | 32.27 | 31.09 |
| Solyc11g022410.1.1 | Tomato | extracellular | 3.66 | 31.08 |
| Solyc07g037910.1.1 | Tomato | cytosol | 10.02 | 29.86 |
| Solyc11g022430.1.1 | Tomato | cytosol | 8.43 | 29.61 |
| Solyc08g062520.2.1 | Tomato | cytosol | 23.85 | 29.35 |
| Solyc10g018000.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 31.8 | 28.61 |
| Solyc04g025480.1.1 | Tomato | cytosol | 29.09 | 27.94 |
| Solyc11g011940.1.1 | Tomato | nucleus | 31.0 | 27.2 |
| Solyc09g066030.1.1 | Tomato | nucleus | 31.0 | 26.97 |
| Solyc08g062510.2.1 | Tomato | nucleus | 27.66 | 26.65 |
| Solyc05g015030.1.1 | Tomato | cytosol | 17.49 | 23.21 |
| Os08t0187500-01 | Rice | nucleus | 10.97 | 21.17 |
| Solyc04g025740.1.1 | Tomato | nucleus | 4.29 | 18.24 |
| Solyc07g026570.1.1 | Tomato | nucleus | 3.97 | 17.73 |
Protein Annotations
| EnsemblPlants:Solyc03g031760.2.1 | EnsemblPlantsGene:Solyc03g031760.2 | Gene3D:3.30.530.20 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008289 |
| InterPro:IPR002913 | InterPro:IPR023393 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | ncoils:Coil | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF513 | PFAM:PF01852 | PFscan:PS50848 | SEG:seg | SMART:SM00234 | SUPFAM:SSF55961 |
| UniParc:UPI0002767621 | UniProt:K4BFE8 | MapMan:15.5.3.3 | : | : | : |
Description
No Description!
Coordinates
chr3:-:4230212..4233914
Molecular Weight (calculated)
67605.8 Da
IEP (calculated)
5.189
GRAVY (calculated)
-0.115
Length
629 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQHERHENS ELRAENEKLR ADNIRYKEAL GNATCPNCGG PASIGEMSFD EQHLRIENAR LREEIDRISG IAAKYVGKPM LTYPNLPPTS PTRSLDIGVG
101: SFGPQTGLVG EMYSAGDLLR SVSGPIDADK PMIIELAVAA MEELVRMAQT GEPLWITGPD PGPGPDSSIE TLCEEEYVRT FPRGIGPKPL GLTTEASRES
201: AVVIMNHINL VEILMDVNQW TNVFAGLVSR ALTLDVLSTG VAGNYNGALQ VMTAEFQVPS PLVPTRENYF VRYCKHHADG TWAVVDVSLD NLRPTSVSRC
301: RRRPSGCLIQ ELPNGYSKVT WIEHVEVDDR GVHNIYKPLV NSGLAFGAKR WVAVLDRQCE RLASAMANNI PTGDIGVITS PEGRKSMLKL AERMVMSFCA
401: GVGASTAHTW TTLSGSGADD VRVMTRKSID DPGRPPGIVL SAATSFWLPV PPKRVFDFLR DENSRSEWDI LSNGGLVQEM AHIANGRDPG NCVSLLRVNS
501: GNSSQSNMLI LQESSTDSTG SYVIYAPVDI VAMNVVLSGG DPDYVALLPS GFAILPDGGG GINVGTGGSL LTVAFQILVD SVPTAKLSLG SVATVNSLIK
601: CTVERIKTAV ACDSIYLKDG GGVKNEPQK
101: SFGPQTGLVG EMYSAGDLLR SVSGPIDADK PMIIELAVAA MEELVRMAQT GEPLWITGPD PGPGPDSSIE TLCEEEYVRT FPRGIGPKPL GLTTEASRES
201: AVVIMNHINL VEILMDVNQW TNVFAGLVSR ALTLDVLSTG VAGNYNGALQ VMTAEFQVPS PLVPTRENYF VRYCKHHADG TWAVVDVSLD NLRPTSVSRC
301: RRRPSGCLIQ ELPNGYSKVT WIEHVEVDDR GVHNIYKPLV NSGLAFGAKR WVAVLDRQCE RLASAMANNI PTGDIGVITS PEGRKSMLKL AERMVMSFCA
401: GVGASTAHTW TTLSGSGADD VRVMTRKSID DPGRPPGIVL SAATSFWLPV PPKRVFDFLR DENSRSEWDI LSNGGLVQEM AHIANGRDPG NCVSLLRVNS
501: GNSSQSNMLI LQESSTDSTG SYVIYAPVDI VAMNVVLSGG DPDYVALLPS GFAILPDGGG GINVGTGGSL LTVAFQILVD SVPTAKLSLG SVATVNSLIK
601: CTVERIKTAV ACDSIYLKDG GGVKNEPQK
001: MYHPNMFESH HMFDMTPKST SDNDLGITGS REDDFETKSG TEVTTENPSG EELQDPSQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLN
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
Arabidopsis Description
PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.