Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11464 | Sorghum | nucleus | 90.05 | 90.62 |
| Os04t0627000-02 | Rice | cytosol, peroxisome | 63.35 | 85.84 |
| TraesCS2B01G497500.1 | Wheat | nucleus | 79.35 | 81.29 |
| TraesCS2D01G473700.1 | Wheat | nucleus | 79.35 | 81.19 |
| Zm00001d026351_P003 | Maize | nucleus | 86.27 | 81.16 |
| HORVU2Hr1G106970.2 | Barley | nucleus, plastid | 79.35 | 81.08 |
| TraesCS2A01G474000.1 | Wheat | nucleus | 79.35 | 81.08 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 65.87 | 79.24 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 70.65 | 77.27 |
| Zm00001d049443_P005 | Maize | nucleus | 76.83 | 76.63 |
| VIT_12s0059g02310.t01 | Wine grape | nucleus | 72.04 | 75.56 |
| VIT_10s0116g00680.t01 | Wine grape | nucleus | 69.02 | 75.48 |
| PGSC0003DMT400061859 | Potato | nucleus | 65.49 | 75.47 |
| KRH56105 | Soybean | nucleus | 68.14 | 74.21 |
| KRH13175 | Soybean | cytosol | 16.5 | 74.01 |
| Solyc03g031760.2.1 | Tomato | cytosol | 58.31 | 73.61 |
| Zm00001d000247_P001 | Maize | plasma membrane | 66.5 | 73.44 |
| GSMUA_Achr11P... | Banana | plastid | 72.42 | 72.88 |
| KRH25398 | Soybean | plastid | 69.65 | 72.67 |
| PGSC0003DMT400029291 | Potato | nucleus | 63.73 | 72.6 |
| CDX90879 | Canola | nucleus | 65.11 | 72.21 |
| CDY21319 | Canola | nucleus | 64.99 | 72.07 |
| Solyc10g005330.2.1 | Tomato | nucleus | 64.61 | 72.05 |
| Bra000807.1-P | Field mustard | nucleus | 53.9 | 71.69 |
| KRH22554 | Soybean | nucleus | 70.28 | 71.45 |
| KRH26803 | Soybean | nucleus | 70.15 | 71.32 |
| GSMUA_Achr10P... | Banana | nucleus | 64.11 | 71.19 |
| CDX98703 | Canola | nucleus | 62.09 | 70.94 |
| CDY27417 | Canola | nucleus | 63.6 | 70.73 |
| CDX94054 | Canola | nucleus | 61.84 | 70.65 |
| KRH27601 | Soybean | nucleus | 65.11 | 70.63 |
| KRH77881 | Soybean | nucleus | 64.99 | 70.59 |
| CDX76399 | Canola | nucleus | 63.48 | 70.49 |
| CDY16639 | Canola | nucleus | 64.86 | 70.26 |
| CDY06167 | Canola | nucleus | 63.6 | 70.14 |
| Bra032478.1-P | Field mustard | nucleus | 63.35 | 69.96 |
| CDX94586 | Canola | nucleus | 64.48 | 69.95 |
| Bra015401.1-P | Field mustard | nucleus | 63.35 | 69.86 |
| PGSC0003DMT400005277 | Potato | nucleus | 64.36 | 69.71 |
| Bra029527.1-P | Field mustard | nucleus | 65.37 | 69.66 |
| AT1G05230.5 | Thale cress | nucleus | 63.22 | 69.63 |
| AT4G04890.1 | Thale cress | nucleus | 65.11 | 69.58 |
| AT4G21750.3 | Thale cress | nucleus | 65.87 | 68.64 |
| Solyc02g080260.2.1 | Tomato | nucleus | 64.86 | 68.58 |
| CDY66622 | Canola | nucleus | 63.1 | 68.54 |
| Bra038757.1-P | Field mustard | nucleus | 62.34 | 68.28 |
| CDY10041 | Canola | nucleus | 63.73 | 67.74 |
| CDX79091 | Canola | nucleus | 63.48 | 67.56 |
| Bra020872.1-P | Field mustard | nucleus | 63.48 | 67.38 |
| Bra013556.1-P | Field mustard | nucleus | 57.18 | 65.8 |
| Zm00001d024701_P001 | Maize | nucleus | 65.37 | 65.12 |
| CDY49515 | Canola | plasma membrane | 64.23 | 62.89 |
| CDY71572 | Canola | nucleus | 31.11 | 62.85 |
| CDY46842 | Canola | nucleus | 63.98 | 61.2 |
| CDY23096 | Canola | nucleus | 9.82 | 59.09 |
| KRG91238 | Soybean | nucleus | 53.4 | 58.0 |
| KRH35579 | Soybean | nucleus | 53.78 | 54.88 |
| Zm00001d018225_P001 | Maize | nucleus | 42.7 | 48.99 |
| Zm00001d052133_P001 | Maize | nucleus | 42.7 | 48.57 |
| Zm00001d037140_P004 | Maize | nucleus | 41.44 | 47.89 |
| Zm00001d040090_P002 | Maize | nucleus | 48.36 | 47.82 |
| Zm00001d044973_P001 | Maize | nucleus | 41.44 | 47.75 |
| VIT_19s0177g00240.t01 | Wine grape | cytosol, mitochondrion | 13.73 | 45.99 |
| Zm00001d026088_P002 | Maize | nucleus | 44.21 | 42.09 |
| Zm00001d021236_P004 | Maize | nucleus | 46.85 | 41.2 |
| Zm00001d040091_P001 | Maize | nucleus | 13.1 | 39.85 |
| PGSC0003DMT400037397 | Potato | cytosol | 24.18 | 39.1 |
| KRH22254 | Soybean | cytosol | 25.31 | 37.57 |
| Solyc10g006420.2.1 | Tomato | cytosol | 24.81 | 37.38 |
| Zm00001d030069_P004 | Maize | nucleus | 40.55 | 36.43 |
| KRH27078 | Soybean | extracellular, golgi, peroxisome | 14.36 | 34.55 |
| Zm00001d019477_P001 | Maize | nucleus | 31.11 | 33.56 |
| Zm00001d004234_P001 | Maize | nucleus | 29.47 | 33.1 |
| Zm00001d043231_P001 | Maize | nucleus | 30.73 | 30.81 |
| Zm00001d004230_P030 | Maize | nucleus | 27.58 | 26.9 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100279217 | MapMan:15.5.3.3 | UniProt:A0A1D6DXQ9 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom |
| InterPro:IPR001356 | InterPro:IPR002913 | ProteinID:ONM13426.1 | ProteinID:ONM13428.1 | PFAM:PF00046 | PFAM:PF01852 |
| ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF349 | SMART:SM00234 |
| SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START_lipid-bd_dom | UniParc:UPI0004DEC5EA | EnsemblPlantsGene:Zm00001d002234 |
| EnsemblPlants:Zm00001d002234_P003 | EnsemblPlants:Zm00001d002234_T003 | SEG:seg | : | : | : |
Description
Homeobox-transcription factor 75Homeodomain leucine zipper family IV protein
Coordinates
chr2:+:8463905..8470129
Molecular Weight (calculated)
85199.0 Da
IEP (calculated)
5.550
GRAVY (calculated)
-0.250
Length
794 amino acids
Sequence
(BLAST)
(BLAST)
001: MMIPARHMPP TMIVRNGGAA YGSSSALSLG QPNLMDNQQL QFQQALQQQH LLLDQIPATT AESCDNTGRG GGGRGSDPLA DEFESKSGSE NVDGVSVDDQ
101: DDPNQRPSKK KRYHRHTLHQ IQEMEAFFKE CPHPDDKQRK ELSRELGLVP LQVKFWFQNK RTQMKNQHER QENSQLRAEN EKLRAENMRY KEALSSASCP
201: NCGGPAALGE MSFDEHHLRV ENARLREEID RISAIAAKYV GKPMVSFPVL SSPLAGARPS PLDIDSGGVL GGAATYGGAA DIFGGGGGVA ACGAARDCDK
301: PMIVELAVTA MEELVRMAQL DEPLWNAPAG GHDGSAETLN EEEYARMFVP AGGLGLKKQY GFKSEASRDS SVVIMTHASL VEILMDVNQY ATVFSSIVSR
401: AATLEVLSTG VAGNYNGALQ VMSVEFQVPS PLVPTRDSYF VRYCKQNADG TWAVVDVSLD TSSVLKCRRR PSGCLIQEMP NGYSKVTWVE HVEVDDRSVN
501: GIYKLLVDSG LAFGARRWVG TLDRQCERLA SVMASNIPTS DIGVITSTEG RKSMLKLAER MVTSFCGGVT ASAAHQWTTL SGSGADDVRV MTRKSVDDPG
601: RPPGIVLNAA TSFWLPITPK RVFDFLRDES SRSEWDILSN GGVVQEMAHI ANGRDHGNCV SLLRVNSTNS TQSNMLILQE SCTDASGSYV IYAPVDVVAM
701: NVVLNGGDPD YVALLPSGFA ILPDGPSGSS NMQGGGGGGV GSGGSLLTVA FQILVDSVPT AKLSLGSVAT VNSLIARTVE RIKAAVSGES VTQQ
101: DDPNQRPSKK KRYHRHTLHQ IQEMEAFFKE CPHPDDKQRK ELSRELGLVP LQVKFWFQNK RTQMKNQHER QENSQLRAEN EKLRAENMRY KEALSSASCP
201: NCGGPAALGE MSFDEHHLRV ENARLREEID RISAIAAKYV GKPMVSFPVL SSPLAGARPS PLDIDSGGVL GGAATYGGAA DIFGGGGGVA ACGAARDCDK
301: PMIVELAVTA MEELVRMAQL DEPLWNAPAG GHDGSAETLN EEEYARMFVP AGGLGLKKQY GFKSEASRDS SVVIMTHASL VEILMDVNQY ATVFSSIVSR
401: AATLEVLSTG VAGNYNGALQ VMSVEFQVPS PLVPTRDSYF VRYCKQNADG TWAVVDVSLD TSSVLKCRRR PSGCLIQEMP NGYSKVTWVE HVEVDDRSVN
501: GIYKLLVDSG LAFGARRWVG TLDRQCERLA SVMASNIPTS DIGVITSTEG RKSMLKLAER MVTSFCGGVT ASAAHQWTTL SGSGADDVRV MTRKSVDDPG
601: RPPGIVLNAA TSFWLPITPK RVFDFLRDES SRSEWDILSN GGVVQEMAHI ANGRDHGNCV SLLRVNSTNS TQSNMLILQE SCTDASGSYV IYAPVDVVAM
701: NVVLNGGDPD YVALLPSGFA ILPDGPSGSS NMQGGGGGGV GSGGSLLTVA FQILVDSVPT AKLSLGSVAT VNSLIARTVE RIKAAVSGES VTQQ
001: MYHPNMFESH HMFDMTPKST SDNDLGITGS REDDFETKSG TEVTTENPSG EELQDPSQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLN
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
Arabidopsis Description
PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.