Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g080260.2.1 | Tomato | nucleus | 96.45 | 94.14 |
| PGSC0003DMT400061859 | Potato | nucleus | 76.67 | 81.57 |
| VIT_10s0116g00680.t01 | Wine grape | nucleus | 78.31 | 79.06 |
| PGSC0003DMT400029291 | Potato | nucleus | 74.35 | 78.19 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 67.94 | 75.45 |
| Os04t0627000-02 | Rice | cytosol, peroxisome | 58.94 | 73.72 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 68.89 | 69.56 |
| EES11464 | Sorghum | nucleus | 72.58 | 67.43 |
| GSMUA_Achr10P... | Banana | nucleus | 65.48 | 67.13 |
| EES13460 | Sorghum | mitochondrion, nucleus | 69.58 | 65.3 |
| TraesCS2B01G497500.1 | Wheat | nucleus | 68.49 | 64.77 |
| TraesCS2D01G473700.1 | Wheat | nucleus | 68.49 | 64.69 |
| TraesCS2A01G474000.1 | Wheat | nucleus | 68.49 | 64.61 |
| Zm00001d002234_P003 | Maize | nucleus | 69.71 | 64.36 |
| Os08t0136100-01 | Rice | nucleus | 68.89 | 64.33 |
| GSMUA_Achr11P... | Banana | plastid | 68.89 | 64.01 |
| Zm00001d049443_P005 | Maize | nucleus | 69.44 | 63.94 |
| Zm00001d026351_P003 | Maize | nucleus | 71.76 | 62.32 |
| TraesCS7A01G308400.1 | Wheat | nucleus | 66.71 | 61.43 |
| TraesCS7D01G305200.1 | Wheat | nucleus | 66.58 | 61.31 |
| TraesCS7B01G208600.1 | Wheat | nucleus | 66.58 | 61.15 |
| Zm00001d000247_P001 | Maize | plasma membrane | 59.48 | 60.64 |
| Zm00001d024701_P001 | Maize | nucleus | 65.48 | 60.23 |
| EES14500 | Sorghum | nucleus | 66.17 | 59.58 |
| PGSC0003DMT400094124 | Potato | nucleus | 58.94 | 57.14 |
| PGSC0003DMT400048971 | Potato | nucleus | 41.75 | 53.87 |
| PGSC0003DMT400071377 | Potato | nucleus | 54.71 | 48.84 |
| PGSC0003DMT400019986 | Potato | nucleus | 52.8 | 47.84 |
| PGSC0003DMT400069312 | Potato | nucleus | 44.34 | 45.45 |
| Os08t0187500-01 | Rice | nucleus | 19.37 | 43.56 |
| PGSC0003DMT400006155 | Potato | nucleus | 44.34 | 42.54 |
| PGSC0003DMT400006770 | Potato | nucleus | 43.66 | 41.45 |
| PGSC0003DMT400037055 | Potato | nucleus | 44.2 | 39.9 |
| PGSC0003DMT400076898 | Potato | cytosol | 26.88 | 39.8 |
| PGSC0003DMT400033830 | Potato | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 19.1 | 39.77 |
| PGSC0003DMT400037397 | Potato | cytosol | 26.47 | 39.51 |
| PGSC0003DMT400062470 | Potato | cytosol, nucleus, plastid | 15.96 | 38.49 |
| PGSC0003DMT400062468 | Potato | cytosol | 18.55 | 38.1 |
| PGSC0003DMT400042908 | Potato | nucleus | 25.78 | 37.95 |
| PGSC0003DMT400092271 | Potato | nucleus | 13.51 | 37.36 |
| PGSC0003DMT400028197 | Potato | cytosol | 16.92 | 37.24 |
| PGSC0003DMT400086035 | Potato | nucleus | 33.29 | 37.14 |
| PGSC0003DMT400080861 | Potato | nucleus | 23.19 | 37.04 |
| PGSC0003DMT400028195 | Potato | nucleus | 18.55 | 35.7 |
| PGSC0003DMT400085057 | Potato | cytosol | 22.78 | 34.94 |
| PGSC0003DMT400038820 | Potato | extracellular | 16.92 | 34.07 |
| PGSC0003DMT400076902 | Potato | nucleus | 31.11 | 34.03 |
| PGSC0003DMT400095083 | Potato | cytosol | 5.59 | 33.88 |
| PGSC0003DMT400051268 | Potato | cytosol | 22.92 | 33.67 |
| PGSC0003DMT400034503 | Potato | cytosol, nucleus | 30.56 | 32.89 |
| PGSC0003DMT400095329 | Potato | cytosol | 12.28 | 32.61 |
| PGSC0003DMT400036411 | Potato | nucleus | 21.83 | 30.48 |
| PGSC0003DMT400051266 | Potato | cytosol | 15.96 | 30.08 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102586817 | MapMan:15.5.3.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0008289 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 | UniProt:M0ZPP8 |
| PFAM:PF00046 | PFAM:PF01852 | EnsemblPlantsGene:PGSC0003DMG400002076 | PGSC:PGSC0003DMG400002076 | EnsemblPlants:PGSC0003DMT400005277 | PFscan:PS50071 |
| PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF320 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 |
| SUPFAM:SSF55961 | InterPro:START_lipid-bd_dom | UniParc:UPI0002964B38 | RefSeq:XP_006348085.1 | RefSeq:XP_015164555.1 | SEG:seg |
Description
Homeobox protein [Source:PGSC_GENE;Acc:PGSC0003DMG400002076]
Coordinates
chr2:+:36087011..36091225
Molecular Weight (calculated)
80356.7 Da
IEP (calculated)
5.642
GRAVY (calculated)
-0.300
Length
733 amino acids
Sequence
(BLAST)
(BLAST)
001: MFNSHQHLLD ISSSAQRTPD NELDFIRDEE FDSNSGADNM EAPNSGDDDQ AEPNQPPNKK KRYHRHTQHQ IQEMESFYKE CNHPDDKQRK ELGRRLGLEP
101: LQVKFWFQNK RTQMKAQHER CENTQLRNEN EKLRSENIRY KEALSNAACP NCGGPAAIGE MSFDEHQLRI ENARLRDEID RITGIAGKYV GKSGLGFSHQ
201: LPLPPPEAPR ALDLAFGPQS GLLGEMYAAG DLLRNAVTGL TDAEKPVVIE LAVTAMEELI RMAQTEEPLW MPSSGIISSE ILCEQEYARI FPRGIGPKPA
301: TLNSEASRES AVVIMNHINL VEILMDVNQW TTVFAGLVSK AMTLEVLSTG VAGNYNGALQ VMTAEFQVPS PLVPTRENYF VRYCKQHGEG TWVVVDVSLD
401: NLRPTSVPRC RRRPSGCLIR EMPNGYSRVI WVEHVEVDEK AVHDIYKPLV NSGIAFGAKR WVATLDRQCE RLASVLAINI PTGDVGIITC PAGRKSMLKL
501: AERMVMSFCA GVGASTTHIW TTLSGSGADD VRVMTRKSID DPGRPPGIVL SAATSFWLPV SPKRVFDFLR DENSRNEWDI LSNGGIVQEM AHIANGRDPG
601: NCVSLLRVNT GTNSNQSNML ILQESTTDIT GSYVIYAPVD IAAMNVVLGG GDPDYVALLP SGFAILPDGP MNHHGGGNSD IDSPGGSLLT VAFQILVDSV
701: PTAKLSLGSV ATVNSLIKCT VEKIKGAVTS ANA
101: LQVKFWFQNK RTQMKAQHER CENTQLRNEN EKLRSENIRY KEALSNAACP NCGGPAAIGE MSFDEHQLRI ENARLRDEID RITGIAGKYV GKSGLGFSHQ
201: LPLPPPEAPR ALDLAFGPQS GLLGEMYAAG DLLRNAVTGL TDAEKPVVIE LAVTAMEELI RMAQTEEPLW MPSSGIISSE ILCEQEYARI FPRGIGPKPA
301: TLNSEASRES AVVIMNHINL VEILMDVNQW TTVFAGLVSK AMTLEVLSTG VAGNYNGALQ VMTAEFQVPS PLVPTRENYF VRYCKQHGEG TWVVVDVSLD
401: NLRPTSVPRC RRRPSGCLIR EMPNGYSRVI WVEHVEVDEK AVHDIYKPLV NSGIAFGAKR WVATLDRQCE RLASVLAINI PTGDVGIITC PAGRKSMLKL
501: AERMVMSFCA GVGASTTHIW TTLSGSGADD VRVMTRKSID DPGRPPGIVL SAATSFWLPV SPKRVFDFLR DENSRNEWDI LSNGGIVQEM AHIANGRDPG
601: NCVSLLRVNT GTNSNQSNML ILQESTTDIT GSYVIYAPVD IAAMNVVLGG GDPDYVALLP SGFAILPDGP MNHHGGGNSD IDSPGGSLLT VAFQILVDSV
701: PTAKLSLGSV ATVNSLIKCT VEKIKGAVTS ANA
001: MYHPNMFESH HMFDMTPKST SDNDLGITGS REDDFETKSG TEVTTENPSG EELQDPSQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLN
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
Arabidopsis Description
PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.