Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G308400.1 | Wheat | nucleus | 83.95 | 82.79 |
| TraesCS7B01G208600.1 | Wheat | nucleus | 83.95 | 82.58 |
| TraesCS7D01G305200.1 | Wheat | nucleus | 83.69 | 82.54 |
| HORVU7Hr1G073440.1 | Barley | nucleus | 83.57 | 82.41 |
| HORVU7Hr1G073450.1 | Barley | mitochondrion, nucleus | 81.02 | 79.9 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 64.08 | 76.21 |
| Zm00001d024701_P001 | Maize | nucleus | 76.18 | 75.03 |
| EES14500 | Sorghum | nucleus | 77.58 | 74.82 |
| Os04t0627000-02 | Rice | cytosol, peroxisome | 55.54 | 74.4 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 68.79 | 74.38 |
| VIT_10s0116g00680.t01 | Wine grape | nucleus | 68.53 | 74.1 |
| PGSC0003DMT400061859 | Potato | nucleus | 64.71 | 73.73 |
| VIT_12s0059g02310.t01 | Wine grape | nucleus | 70.83 | 73.45 |
| KRH56105 | Soybean | nucleus | 67.64 | 72.84 |
| PGSC0003DMT400029291 | Potato | nucleus | 63.69 | 71.74 |
| KRH25398 | Soybean | plastid | 69.43 | 71.62 |
| Solyc03g031760.2.1 | Tomato | cytosol | 57.2 | 71.38 |
| CDX90879 | Canola | nucleus | 64.97 | 71.23 |
| CDY21319 | Canola | nucleus | 64.84 | 71.09 |
| Solyc10g005330.2.1 | Tomato | nucleus | 64.46 | 71.07 |
| KRH13175 | Soybean | cytosol | 15.92 | 70.62 |
| KRH22554 | Soybean | nucleus | 70.19 | 70.55 |
| KRH26803 | Soybean | nucleus | 69.94 | 70.29 |
| AT1G05230.5 | Thale cress | nucleus | 64.46 | 70.18 |
| CDY06167 | Canola | nucleus | 64.2 | 70.0 |
| Bra015401.1-P | Field mustard | nucleus | 64.2 | 70.0 |
| Bra032478.1-P | Field mustard | nucleus | 64.08 | 69.96 |
| CDY16639 | Canola | nucleus | 64.97 | 69.58 |
| CDX94586 | Canola | nucleus | 64.84 | 69.54 |
| Bra000807.1-P | Field mustard | nucleus | 52.87 | 69.51 |
| Os09t0526300-00 | Rice | nucleus | 11.59 | 69.47 |
| KRH77881 | Soybean | nucleus | 64.59 | 69.36 |
| KRH27601 | Soybean | nucleus | 64.59 | 69.26 |
| CDY27417 | Canola | nucleus | 62.8 | 69.05 |
| Bra029527.1-P | Field mustard | nucleus | 65.48 | 68.99 |
| CDX98703 | Canola | nucleus | 61.02 | 68.92 |
| PGSC0003DMT400005277 | Potato | nucleus | 64.33 | 68.89 |
| GSMUA_Achr10P... | Banana | nucleus | 62.68 | 68.81 |
| CDX94054 | Canola | nucleus | 60.89 | 68.78 |
| GSMUA_Achr11P... | Banana | plastid | 69.04 | 68.69 |
| CDX76399 | Canola | nucleus | 62.55 | 68.67 |
| AT4G04890.1 | Thale cress | nucleus | 64.97 | 68.64 |
| Solyc02g080260.2.1 | Tomato | nucleus | 65.1 | 68.04 |
| CDY10041 | Canola | nucleus | 64.46 | 67.74 |
| AT4G21750.3 | Thale cress | nucleus | 65.22 | 67.19 |
| CDY66622 | Canola | nucleus | 62.04 | 66.62 |
| Bra038757.1-P | Field mustard | nucleus | 61.27 | 66.34 |
| CDX79091 | Canola | nucleus | 62.29 | 65.55 |
| Bra020872.1-P | Field mustard | nucleus | 62.29 | 65.37 |
| Os06t0208100-00 | Rice | nucleus | 10.7 | 65.12 |
| CDY71572 | Canola | nucleus | 32.23 | 64.38 |
| Bra013556.1-P | Field mustard | nucleus | 55.67 | 63.33 |
| CDY49515 | Canola | plasma membrane | 64.71 | 62.64 |
| CDY46842 | Canola | nucleus | 64.71 | 61.2 |
| CDY23096 | Canola | nucleus | 10.19 | 60.61 |
| KRG91238 | Soybean | nucleus | 54.39 | 58.41 |
| KRH35579 | Soybean | nucleus | 54.27 | 54.76 |
| Os06t0207966-00 | Rice | plastid | 17.58 | 52.47 |
| Os08t0187500-01 | Rice | nucleus | 21.02 | 50.61 |
| Os02t0674800-01 | Rice | nucleus | 50.06 | 48.88 |
| Os04t0569100-01 | Rice | nucleus | 48.53 | 47.27 |
| VIT_19s0177g00240.t01 | Wine grape | cytosol, mitochondrion | 14.14 | 46.84 |
| Os01t0760800-00 | Rice | nucleus | 7.52 | 44.03 |
| PGSC0003DMT400037397 | Potato | cytosol | 24.08 | 38.49 |
| Os10t0575600-01 | Rice | nucleus | 42.17 | 37.53 |
| Solyc10g006420.2.1 | Tomato | cytosol | 24.71 | 36.81 |
| KRH22254 | Soybean | cytosol | 24.84 | 36.45 |
| Os01t0788800-01 | Rice | nucleus | 28.28 | 35.29 |
| KRH27078 | Soybean | extracellular, golgi, peroxisome | 14.27 | 33.94 |
| Os08t0292000-01 | Rice | nucleus | 27.39 | 27.18 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | EntrezGene:4344614 | UniProt:B9FYY9 | ProteinID:BAT03740.1 | ncoils:Coil |
| ProteinID:EEE68006.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 | EnsemblPlantsGene:Os08g0136100 |
| EnsemblPlants:Os08t0136100-01 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS50848 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF349 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 |
| InterPro:START_lipid-bd_dom | UniParc:UPI0001934A74 | RefSeq:XP_015648539.1 | SEG:seg | : | : |
Description
RICE OUTMOST CELL-SPECIFIC GENE 7Similar to Roc1. (Os08t0136100-01)
Coordinates
chr8:-:2033903..2039301
Molecular Weight (calculated)
84176.7 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.352
Length
785 amino acids
Sequence
(BLAST)
(BLAST)
001: MMIPGRNMSP AMIGRPNGGG GGGGVAYASS SSALSLGQSL LDGHHHQLPS LLQQHHNGHH LLDQHQQHQH QLPPQATTTS ESDGRAPRDE LEMSKSGGSD
101: NLESGGGGGG GGSGGDQDPN QRPRKKRYHR HTQHQIQELE AFFKECPHPD DKQRKELSRE LGLEPLQVKF WFQNKRTQMK TQHERHENNA LRAENEKLRA
201: ENMRYKEALA NASCPNCGGP AAIGEMSFDE HHLRLENARL RDEIDRISAI AAKYVGKPAA AVSAAYPPLP PSNRSPLDHM GIPGAGADVF GADFDKPLVI
301: ELAVAAMEEL VRMAQLGEPL WAPALGGEAL GEEEYARTFP RGLGPKSPEL RSEASRETAV VIMNHVSLVE MLMDVGQWTA LFSSIVSRAA TLEVLSTGVA
401: GNHNGALQLM SAEFQMPSPL VPTRETQFLR YCKQHPDGTW AVVDVSLDGL RAGAGGGCQP AAARGHRRRP SGCLIQEMPN GYSKVTWVEH VEADDQMVHN
501: LYKPVVNSGM AFGARRWVAT LERQCERLAS AMASNVASSG DAGVITTSEG RRSMLKLAER MVASFCGGVT ASTTHQWTTL SGSGAEDVRV MTRKSVDDPG
601: RPPGIILNAA TSFWLPVPPS RVFDFLRDDS TRSEWDILSN GGVVQEMAHI ANGRDHGNAV SLLRVNNANS NQSNMLILQE CCTDATGSYV IYAPVDVVAM
701: NVVLNGGDPD YVALLPSGFA ILPDGPDGGG GSLLTVAFQI LVDSVPTAKL SLGSVATVNS LIACTVERIK AAITGDNGVA PPCPR
101: NLESGGGGGG GGSGGDQDPN QRPRKKRYHR HTQHQIQELE AFFKECPHPD DKQRKELSRE LGLEPLQVKF WFQNKRTQMK TQHERHENNA LRAENEKLRA
201: ENMRYKEALA NASCPNCGGP AAIGEMSFDE HHLRLENARL RDEIDRISAI AAKYVGKPAA AVSAAYPPLP PSNRSPLDHM GIPGAGADVF GADFDKPLVI
301: ELAVAAMEEL VRMAQLGEPL WAPALGGEAL GEEEYARTFP RGLGPKSPEL RSEASRETAV VIMNHVSLVE MLMDVGQWTA LFSSIVSRAA TLEVLSTGVA
401: GNHNGALQLM SAEFQMPSPL VPTRETQFLR YCKQHPDGTW AVVDVSLDGL RAGAGGGCQP AAARGHRRRP SGCLIQEMPN GYSKVTWVEH VEADDQMVHN
501: LYKPVVNSGM AFGARRWVAT LERQCERLAS AMASNVASSG DAGVITTSEG RRSMLKLAER MVASFCGGVT ASTTHQWTTL SGSGAEDVRV MTRKSVDDPG
601: RPPGIILNAA TSFWLPVPPS RVFDFLRDDS TRSEWDILSN GGVVQEMAHI ANGRDHGNAV SLLRVNNANS NQSNMLILQE CCTDATGSYV IYAPVDVVAM
701: NVVLNGGDPD YVALLPSGFA ILPDGPDGGG GSLLTVAFQI LVDSVPTAKL SLGSVATVNS LIACTVERIK AAITGDNGVA PPCPR
001: MFEPNMLLAA MNNADSNNHN YNHEDNNNEG FLRDDEFDSP NTKSGSENQE GGSGNDQDPL HPNKKKRYHR HTQLQIQEME AFFKECPHPD DKQRKQLSRE
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RVNSANSSQS NMLILQESCT DPTASFVIYA PVDIVAMNIV LNGGDPDYVA LLPSGFAILP DGNANSGAPG GDGGSLLTVA FQILVDSVPT AKLSLGSVAT
701: VNNLIACTVE RIKASMSCET A
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RVNSANSSQS NMLILQESCT DPTASFVIYA PVDIVAMNIV LNGGDPDYVA LLPSGFAILP DGNANSGAPG GDGGSLLTVA FQILVDSVPT AKLSLGSVAT
701: VNNLIACTVE RIKASMSCET A
Arabidopsis Description
HDG2AT1G05230 protein [Source:UniProtKB/TrEMBL;Acc:B9DFH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.