Factsheet for Os01t0760800-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G006920.1	Barley	nucleus	36.57	49.49
Os09t0526300-00	Rice	nucleus	47.01	48.09
Os06t0208100-00	Rice	nucleus	45.52	47.29
Os08t0187500-01	Rice	nucleus	41.79	17.18
HORVU3Hr1G073290.1	Barley	nucleus	68.66	14.02
GSMUA_Achr3P15400_001	Banana	nucleus	68.66	12.28
TraesCS3A01G305300.1	Wheat	nucleus	69.4	12.22
TraesCS3B01G331200.1	Wheat	nucleus	68.66	12.19
VIT_09s0002g04340.t01	Wine grape	nucleus	67.16	12.0
KRH09884	Soybean	plastid	64.18	11.45
GSMUA_Achr8P27340_001	Banana	nucleus	63.43	11.35
KRH23432	Soybean	plastid	64.18	11.29
KRH47277	Soybean	nucleus	62.69	11.19
KRH44348	Soybean	nucleus	61.94	11.1
Bra003535.1-P	Field mustard	nucleus	60.45	10.8
CDX67929	Canola	nucleus	60.45	10.34
AT1G79840.2	Thale cress	nucleus, plastid	59.7	10.31
CDX79408	Canola	nucleus	59.7	10.26
PGSC0003DMT400006770	Potato	nucleus	58.21	10.1
Solyc03g120620.2.1	Tomato	nucleus	56.72	9.81
Os02t0674800-01	Rice	nucleus	49.25	8.21
OQU87592	Sorghum	nucleus	43.28	8.16
Os04t0569100-01	Rice	nucleus	48.51	8.06
TraesCS3D01G296500.3	Wheat	nucleus	44.78	7.56
Os08t0136100-01	Rice	nucleus	44.03	7.52
Os10t0575600-01	Rice	nucleus	44.78	6.8
Os01t0788800-01	Rice	nucleus	26.12	5.56
Os08t0292000-01	Rice	nucleus	23.13	3.92
Os04t0627000-02	Rice	cytosol, peroxisome	5.22	1.19
Os06t0207966-00	Rice	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.3	UniProt:A0A0P0V8J2	ProteinID:BAS74452.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:HTH_motif	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom
InterPro:IPR001356	EnsemblPlantsGene:Os01g0760800	EnsemblPlants:Os01t0760800-00	PFAM:PF00046	PRINTS:PR00031	ScanProsite:PS00027
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF272	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI00001A3761
SEG:seg	:	:	:	:	:

Description

RICE OUTMOST CELL-SPECIFIC GENE 9Similar to Homeodomain protein 1. (Os01t0760800-00)

Coordinates

chr1:-:32008634..32009393

Molecular Weight (calculated)

15584.7 Da

IEP (calculated)

10.906

GRAVY (calculated)

-1.049

Length

134 amino acids

Sequence
(BLAST)

001: RKNYHRHTAE QIRIMEALFK ESPHPDERQR QQVSKQLGLS ARQVKFWFQN RRTQIKERHE NSLLKSELEK LQDEHRAMRE LAKKPSRCLN CGVVATSSDA
101: AAAATAADTR EQRLRLEKAK LKAEVCMPPP RSRA

Best Arabidopsis Sequence Match ( AT1G79840.5 )
(BLAST)

001: MSMAVDMSSK QPTKDFFSSP ALSLSLAGIF RNASSGSTNP EEDFLGRRVV DDEDRTVEMS SENSGPTRSR SEEDLEGEDH DDEEEEEEDG AAGNKGTNKR
101: KRKKYHRHTT DQIRHMEALF KETPHPDEKQ RQQLSKQLGL APRQVKFWFQ NRRTQIKAIQ ERHENSLLKA ELEKLREENK AMRESFSKAN SSCPNCGGGP
201: DDLHLENSKL KAELDKLRAA LGRTPYPLQA SCSDDQEHRL GSLDFYTGVF ALEKSRIAEI SNRATLELQK MATSGEPMWL RSVETGREIL NYDEYLKEFP
301: QAQASSFPGR KTIEASRDAG IVFMDAHKLA QSFMDVGQWK ETFACLISKA ATVDVIRQGE GPSRIDGAIQ LMFGEMQLLT PVVPTREVYF VRSCRQLSPE
401: KWAIVDVSVS VEDSNTEKEA SLLKCRKLPS GCIIEDTSNG HSKVTWVEHL DVSASTVQPL FRSLVNTGLA FGARHWVATL QLHCERLVFF MATNVPTKDS
501: LGPSIYPDPP FTLSIFLYI

Arabidopsis Description

GL2HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4HQC0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.