Factsheet for Os10t0575600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0506100-00
Os04t0382800-00
Os06t0207966-00
Os06t0208100-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G17710.1	Os06t0207966-00	AT1G73360.1	21798944
AT4G17710.1	Os06t0208100-00	AT1G73360.1	21798944
AT4G17710.1	Os02t0506100-00	AT3G11590.1	21798944
AT4G17710.1	Os04t0382800-00	AT3G11590.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38837	Sorghum	nucleus	82.2	82.2
Zm00001d030069_P004	Maize	nucleus	80.95	80.77
TraesCS1D01G197300.1	Wheat	nucleus	80.61	80.52
HORVU1Hr1G050620.2	Barley	nucleus	80.39	80.11
TraesCS1A01G193400.1	Wheat	nucleus, plastid	79.02	79.84
TraesCS1B01G208400.1	Wheat	nucleus	80.27	79.55
GSMUA_Achr5P14100_001	Banana	nucleus	56.01	65.34
GSMUA_Achr4P19010_001	Banana	nucleus	57.37	63.17
VIT_02s0012g02030.t01	Wine grape	nucleus	57.14	63.16
Os09t0526300-00	Rice	nucleus	9.3	62.6
KRH74360	Soybean	nucleus	53.4	59.7
Os06t0208100-00	Rice	nucleus	8.73	59.69
KRH39579	Soybean	nucleus	53.74	59.25
PGSC0003DMT400006155	Potato	nucleus	49.89	57.59
Solyc08g076370.2.1	Tomato	nucleus	53.4	55.94
AT5G46880.3	Thale cress	nucleus	48.19	51.45
CDY43458	Canola	nucleus	46.49	50.49
Bra017519.1-P	Field mustard	nucleus	46.6	50.37
CDY03177	Canola	nucleus	47.05	50.24
Bra024984.1-P	Field mustard	nucleus	45.12	50.06
CDY33492	Canola	nucleus	45.12	50.0
AT4G17710.1	Thale cress	nucleus	40.02	49.79
CDX77711	Canola	nucleus	46.37	49.7
CDY08866	Canola	nucleus	40.25	48.23
Bra021035.1-P	Field mustard	nucleus	39.68	47.68
CDX76559	Canola	nucleus	39.68	47.68
Os01t0760800-00	Rice	nucleus	6.8	44.78
Os06t0207966-00	Rice	plastid	12.93	43.35
Os04t0627000-02	Rice	cytosol, peroxisome	28.46	42.83
Os08t0136100-01	Rice	nucleus	37.53	42.17
Os02t0674800-01	Rice	nucleus	34.35	37.69
Os04t0569100-01	Rice	nucleus	33.79	36.97
Os08t0187500-01	Rice	nucleus	12.81	34.66
Os01t0788800-01	Rice	nucleus	18.82	26.39
Os08t0292000-01	Rice	nucleus	22.11	24.65

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.3	EntrezGene:4349488	ProteinID:AAL67592.1	EMBL:AB101646	ProteinID:ABB48020.1
ProteinID:ABB48021.1	ProteinID:BAF27318.1	ProteinID:BAT12196.1	ncoils:Coil	ProteinID:EAZ17072.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0008289	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR002913	EnsemblPlantsGene:Os10g0575600	EnsemblPlants:Os10t0575600-01	PFAM:PF00046
PFAM:PF01852	ScanProsite:PS00027	PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF267
UniProt:Q336P2	SMART:SM00234	SMART:SM00389	SUPFAM:SSF46689	SUPFAM:SSF55961	InterPro:START_lipid-bd_dom
UniParc:UPI00005E1FC0	RefSeq:XP_015613461.1	SEG:seg	:	:	:

Description

RICE OUTMOST CELL-SPECIFIC GENE 3Homeodomain-related containing protein. (Os10t0575600-01)

Coordinates

chr10:-:22910470..22916203

Molecular Weight (calculated)

94672.6 Da

IEP (calculated)

5.893

GRAVY (calculated)

-0.186

Length

882 amino acids

Sequence
(BLAST)

001: MRRMFGDCQV LSSMAAMAGA ASSADALFAS PLIPNPALAG FMSSSAAMPF HHFSNAAATL IPKEEGLMGG LHVAKDEGMD LEMDMELSGG SGSAHLDGLL
101: SFADVDDDHK PQHSGHDQPP DAAQPSGAAG GNAKKKRYHR HTAHQIQQME ALFKECPHPD DKQRLKLSQE LGLKPRQVKF WFQNRRTQMK AQQDRADNVI
201: LRAENENLKS DNFRLQAAIR NVVCPNCGHA AVLADMSYEE QQLRIENARL KDELDRLACI ATRYGGGGGR QPVLSTSALS CISAPPPVLM PPLDLDMNVY
301: SRHFAEQAPV MGCGDLIPPP VVPQHDGAAA YMGAMMAPVQ EQDKQLVVDL AATAADQLAR MCRAGEPLWV RQRGAEVMAV EEHARMFSWP VDGAKQGDGG
401: AVARAEGTRD NAVVIMNSIN LVDAFLDANK WMELFPSIVC KARTIQIINH GAASGHLGSG TLLLMQAEVQ FLSPLVAARE VVFFRYCVHN ADEGSWAIVD
501: FPAEGFEEGL LQASVVRCRR RPSGCIIQDM PNGYSRVVWV EHMEMVGEEK PLQPVFRDYV ASGAAFGATR WLSILQRQCE RLASELARNI ADLGVIRTPE
601: ARTNMMKLSQ RMITTFCANI SASGTQSWTA LSDSTQDTIR VTTRKNTEPG QPSGVILTAV STSWLPFTHQ QVFELLADEQ QRCQLEILSN GGSLHEVAHI
701: ANGSHPRNCI SLLRINAASN SSQNVELLLQ ESSTHPDGGS LVVFATVDVD AIQVTMSGED PSYIPLLPLG FAIFPATSPS PAAAPTISSS TTTTTGNGNG
801: ETSSTPPRNS SSNNNNADEL LPPNGCLLTV GMQVLASAVP SAKLNLSSVT AINSHVCNAI HQITAALKSS AGGAGGEPAS DQ

Best Arabidopsis Sequence Match ( AT5G46880.3 )
(BLAST)

001: MLTMGEGNVM TSNNRFASPP QQPSSSSPGT IQNPNFNFIP FNSYSSIIPK EEHGMMSMMM MMGDGTVEEM MENGSAGGSF GSGSEQAEDP KFGNESDVNE
101: LHDDEQPPPA KKKRYHRHTN RQIQEMEALF KENPHPDDKQ RKRLSAELGL KPRQVKFWFQ NRRTQMKAQQ DRNENVMLRA ENDNLKSENC HLQAELRCLS
201: CPSCGGPTVL GDIPFNEIHI ENCRLREELD RLCCIASRYT GRPMQSMPPS QPLINPSPML PHHQPSLELD MSVYAGNFPE QSCTDMMMLP PQDTACFFPD
301: QTANNNNNNN MLLADEEKVI AMEFAVSCVQ ELTKMCDTEE PLWIKKKSDK IGGEILCLNE EEYMRLFPWP MENQNNKGDF LREASKANAV VIMNSITLVD
401: AFLNADKWSE MFCSIVARAK TVQIISSGVS GASGSLLLMF AELQVLSPLV PTREAYFLRY VEQNAETGNW AIVDFPIDSF HDQMQPMNTI THEYKRKPSG
501: CIIQDMPNGY SQVKWVEHVE VDEKHVHETF AEYVKSGMAF GANRWLDVLQ RQCERIASLM ARNITDLGVI SSAEARRNIM RLSQRLVKTF CVNISTAYGQ
601: SWTALSETTK DTVRITTRKM CEPGQPTGVV LCAVSTTWLP FSHHQVFDLI RDQHHQSLLE VLFNGNSPHE VAHIANGSHP GNCISLLRIN VASNSWHNVE
701: LMLQESCIDN SGSLIVYSTV DVDSIQQAMN GEDSSNIPIL PLGFSIVPVN PPEGISVNSH SPPSCLLTVG IQVLASNVPT AKPNLSTVTT INNHLCATVN
801: QITSALSNTI TPVIASSADV SNQEVS

Arabidopsis Description

HDG5Homeobox-leucine zipper protein HDG5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJS2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.