Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11990 | Sorghum | nucleus | 69.0 | 69.37 |
| Zm00001d025208_P002 | Maize | nucleus | 69.0 | 67.24 |
| Zm00001d003996_P001 | Maize | nucleus | 66.37 | 66.61 |
| TraesCS2B01G299400.1 | Wheat | nucleus, plastid | 63.57 | 65.17 |
| HORVU2Hr1G069400.8 | Barley | nucleus | 57.09 | 64.05 |
| TraesCS2D01G281000.1 | Wheat | nucleus, plastid | 63.05 | 63.6 |
| TraesCS2A01G282200.1 | Wheat | nucleus | 63.05 | 63.6 |
| Os02t0506100-00 | Rice | plastid | 34.5 | 45.18 |
| Bra001412.1-P | Field mustard | nucleus | 17.16 | 28.24 |
| VIT_06s0080g00930.t01 | Wine grape | plastid | 31.7 | 27.76 |
| CDY01038 | Canola | plastid | 28.2 | 26.39 |
| CDX73866 | Canola | cytosol | 16.99 | 26.29 |
| AT3G11590.1 | Thale cress | plastid | 28.55 | 26.21 |
| Solyc11g068720.1.1 | Tomato | nucleus | 28.9 | 26.03 |
| CDY56601 | Canola | cytosol, golgi, plastid | 16.81 | 26.02 |
| GSMUA_Achr6P16290_001 | Banana | nucleus | 28.02 | 25.93 |
| PGSC0003DMT400067737 | Potato | nucleus | 25.92 | 25.92 |
| Bra034827.1-P | Field mustard | plastid | 27.85 | 25.9 |
| CDX88802 | Canola | nucleus | 21.19 | 25.85 |
| CDY08511 | Canola | plastid | 27.85 | 25.85 |
| Bra006620.1-P | Field mustard | nucleus | 20.32 | 25.72 |
| CDX70996 | Canola | nucleus | 21.02 | 25.26 |
| VIT_08s0007g02790.t01 | Wine grape | plastid | 29.07 | 25.23 |
| Bra002404.1-P | Field mustard | nucleus | 21.37 | 25.21 |
| CDX92367 | Canola | mitochondrion, plastid | 21.02 | 25.0 |
| KRG96225 | Soybean | nucleus | 28.37 | 24.73 |
| PGSC0003DMT400072353 | Potato | plastid | 28.37 | 24.73 |
| KRH67971 | Soybean | plastid | 28.55 | 24.7 |
| CDY67997 | Canola | mitochondrion, plastid | 20.32 | 24.63 |
| Solyc10g083190.1.1 | Tomato | plastid | 28.37 | 24.51 |
| Solyc06g074190.2.1 | Tomato | nucleus | 23.12 | 24.35 |
| KRH25284 | Soybean | plastid | 28.02 | 24.28 |
| AT5G22310.1 | Thale cress | nucleus | 20.32 | 24.12 |
| KRH30384 | Soybean | plastid | 27.5 | 23.72 |
| PGSC0003DMT400015076 | Potato | nucleus | 23.47 | 23.55 |
| GSMUA_Achr6P08260_001 | Banana | nucleus | 20.32 | 20.24 |
| Os02t0260500-00 | Rice | nucleus | 14.89 | 17.1 |
| Os04t0625000-01 | Rice | nucleus | 20.14 | 16.52 |
| Os07t0102200-01 | Rice | mitochondrion, nucleus | 15.41 | 16.39 |
| Os08t0190700-00 | Rice | nucleus | 15.59 | 15.01 |
| Os05t0498500-01 | Rice | cytosol, nucleus | 2.45 | 9.46 |
| Os06t0507900-01 | Rice | cytosol, nucleus | 5.25 | 9.12 |
Protein Annotations
| EnsemblPlants:Os04t0382800-00 | EnsemblPlantsGene:Os04g0382800 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF18 | ProteinID:BAS88907.1 |
| SEG:seg | UniParc:UPI000393AEB3 | UniProt:A0A0P0W9W5 | MapMan:35.1 | : | : |
Description
Conserved hypothetical protein. (Os04t0382800-00)
Coordinates
chr4:+:18779947..18783319
Molecular Weight (calculated)
63748.4 Da
IEP (calculated)
9.683
GRAVY (calculated)
-0.734
Length
571 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRRGGGEEG GGVVGAGAVV RRLDRIRKRG ALSSSGGSGA ARKLRFRAPA VLLRRRSGAA AMSEASSRTR GRHCRAQAAA AADGARPARR LVGAFWQMDK
101: ERLFGEDAAA AAPPPRRSGL LPRSRAPTEA SEGHAAAFSQ IYRLIWFWWL FDSSNLVSKG SRRSRSKILE ADVKGSWHGG GHGHWLSSTD VMSNATAMEI
201: VTCSQDDVSR CPQEKTVNLH DLHNSLIASK ELVRVLAHIW GPGELNPSTT SLISALRSEI DLARSHVRKL IKEQKSEGIE SLKKQLVQEM ESWKSKQKEK
301: VANALQYIVS ELDSEKKSRR RAERINKKLG MALANTEASL QAATKELERE RKSKGRVEKI CTELIRGIGE DKAEVEALKK ETEKAQEELQ KEREMLQLAD
401: EWREQRVQMK LLEARLQFEE KNAAINQLHD ELQAYLDTKK EHGQSNDQMT LLRASENGSD MHSIELNVDG NSKSYTWSYT PTSKDRKRNA SFSQRGMDSG
501: SSCGFDRKFQ ETGEELLEGD WAEGCSNGML NFEHDEERYL AIKNLREQML AGSGFIVSQG REHAESEFCG L
101: ERLFGEDAAA AAPPPRRSGL LPRSRAPTEA SEGHAAAFSQ IYRLIWFWWL FDSSNLVSKG SRRSRSKILE ADVKGSWHGG GHGHWLSSTD VMSNATAMEI
201: VTCSQDDVSR CPQEKTVNLH DLHNSLIASK ELVRVLAHIW GPGELNPSTT SLISALRSEI DLARSHVRKL IKEQKSEGIE SLKKQLVQEM ESWKSKQKEK
301: VANALQYIVS ELDSEKKSRR RAERINKKLG MALANTEASL QAATKELERE RKSKGRVEKI CTELIRGIGE DKAEVEALKK ETEKAQEELQ KEREMLQLAD
401: EWREQRVQMK LLEARLQFEE KNAAINQLHD ELQAYLDTKK EHGQSNDQMT LLRASENGSD MHSIELNVDG NSKSYTWSYT PTSKDRKRNA SFSQRGMDSG
501: SSCGFDRKFQ ETGEELLEGD WAEGCSNGML NFEHDEERYL AIKNLREQML AGSGFIVSQG REHAESEFCG L
001: MPRQNQSVEN LLLLGKIRKR GCSSPTSSTS SILREGYRFK RAIVVGKRGG STTPVPTWRL MGRSPSPRAS GALHAAASPS SHCGSKTGKV SAPAPVSARK
101: LAATLWEMNE MPSPRVVEEA APMIRKSRKE RIAPLPPPRS SVHSGSLPPH LSDPSHSPVS ERMERSGTGS RQRRASSTVQ KLRLGDCNVG ARDPINSGSF
201: MDIETRSRVE TPTGSTVGVK TRLKDCSNAL TTSKELLKII NRMWGQDDRP SSSMSLVSAL HSELERARLQ VNQLIHEHKP ENNDISYLMK RFAEEKAVWK
301: SNEQEVVEAA IESVAGELEV ERKLRRRFES LNKKLGKELA ETKSALMKAV KEIENEKRAR VMVEKVCDEL ARDISEDKAE VEELKRESFK VKEEVEKERE
401: MLQLADALRE ERVQMKLSEA KHQLEEKNAA VDKLRNQLQT YLKAKRCKEK TREPPQTQLH NEEAGDYLNH HISFGSYNIE DGEVENGNEE GSGESDLHSI
501: ELNIDNKSYK WPYGEENRGR KSTPRKSLSL QRSISDCVDW VVQSEKLQKS GDGGLDWGRS IDVEPKGYID ETQAYKPNKA SSKDHHILSG SRLSNFRGGS
601: VSKSRLSDAS KGENQNARKS RW
101: LAATLWEMNE MPSPRVVEEA APMIRKSRKE RIAPLPPPRS SVHSGSLPPH LSDPSHSPVS ERMERSGTGS RQRRASSTVQ KLRLGDCNVG ARDPINSGSF
201: MDIETRSRVE TPTGSTVGVK TRLKDCSNAL TTSKELLKII NRMWGQDDRP SSSMSLVSAL HSELERARLQ VNQLIHEHKP ENNDISYLMK RFAEEKAVWK
301: SNEQEVVEAA IESVAGELEV ERKLRRRFES LNKKLGKELA ETKSALMKAV KEIENEKRAR VMVEKVCDEL ARDISEDKAE VEELKRESFK VKEEVEKERE
401: MLQLADALRE ERVQMKLSEA KHQLEEKNAA VDKLRNQLQT YLKAKRCKEK TREPPQTQLH NEEAGDYLNH HISFGSYNIE DGEVENGNEE GSGESDLHSI
501: ELNIDNKSYK WPYGEENRGR KSTPRKSLSL QRSISDCVDW VVQSEKLQKS GDGGLDWGRS IDVEPKGYID ETQAYKPNKA SSKDHHILSG SRLSNFRGGS
601: VSKSRLSDAS KGENQNARKS RW
Arabidopsis Description
At3g11590/F24K9_26 [Source:UniProtKB/TrEMBL;Acc:Q9CAW9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.