Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g068720.1.1 | Tomato | nucleus | 96.32 | 86.75 |
| PGSC0003DMT400015076 | Potato | nucleus | 62.35 | 62.57 |
| VIT_06s0080g00930.t01 | Wine grape | plastid | 53.94 | 47.24 |
| KRH30384 | Soybean | plastid | 45.36 | 39.12 |
| KRH25284 | Soybean | plastid | 45.01 | 39.0 |
| PGSC0003DMT400072353 | Potato | plastid | 41.68 | 36.34 |
| GSMUA_Achr6P16290_001 | Banana | nucleus | 32.4 | 29.98 |
| Bra006620.1-P | Field mustard | nucleus | 23.64 | 29.93 |
| Os02t0506100-00 | Rice | plastid | 22.59 | 29.59 |
| HORVU2Hr1G069400.8 | Barley | nucleus | 25.92 | 29.08 |
| CDX88802 | Canola | nucleus | 23.64 | 28.85 |
| AT5G22310.1 | Thale cress | nucleus | 24.17 | 28.69 |
| CDY67997 | Canola | mitochondrion, plastid | 23.64 | 28.66 |
| CDX70996 | Canola | nucleus | 23.82 | 28.63 |
| CDX92367 | Canola | mitochondrion, plastid | 23.64 | 28.12 |
| Bra002404.1-P | Field mustard | nucleus | 23.64 | 27.89 |
| TraesCS2D01G281000.1 | Wheat | nucleus, plastid | 26.09 | 26.33 |
| EES11990 | Sorghum | nucleus | 26.09 | 26.23 |
| TraesCS2B01G299400.1 | Wheat | nucleus, plastid | 25.39 | 26.03 |
| Os04t0382800-00 | Rice | nucleus | 25.92 | 25.92 |
| TraesCS2A01G282200.1 | Wheat | nucleus | 25.57 | 25.8 |
| Zm00001d025208_P002 | Maize | nucleus | 26.44 | 25.77 |
| Zm00001d003996_P001 | Maize | nucleus | 25.57 | 25.66 |
| Zm00001d000402_P001 | Maize | mitochondrion | 23.29 | 24.27 |
| TraesCS7D01G134000.1 | Wheat | nucleus | 24.52 | 24.18 |
| TraesCS7A01G134600.1 | Wheat | nucleus | 23.82 | 23.49 |
| TraesCS7B01G035800.1 | Wheat | nucleus | 23.47 | 23.18 |
| GSMUA_Achr6P08260_001 | Banana | nucleus | 22.77 | 22.69 |
| KXG30263 | Sorghum | mitochondrion | 24.69 | 22.67 |
| PGSC0003DMT400042430 | Potato | nucleus | 20.84 | 18.95 |
| PGSC0003DMT400071667 | Potato | nucleus | 22.42 | 18.8 |
| PGSC0003DMT400057488 | Potato | nucleus | 22.77 | 18.79 |
| PGSC0003DMT400032084 | Potato | nucleus | 21.37 | 17.99 |
| PGSC0003DMT400000259 | Potato | nucleus | 19.61 | 17.15 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400067737 | EnsemblPlantsGene:PGSC0003DMG400026345 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF16 | PGSC:PGSC0003DMG400026345 |
| SEG:seg | UniParc:UPI000296E4DD | UniProt:M1CHT0 | MapMan:35.1 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400026345]
Coordinates
chr11:+:40605458..40609684
Molecular Weight (calculated)
65210.1 Da
IEP (calculated)
5.985
GRAVY (calculated)
-0.962
Length
571 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSRSPSLQN DSGNSSKLFK NLQQQTAKGT ATDLSVSARK LGATLWEING VLLPIPKKEE NFLKSSSKFG ALASHPSQIS PVSERMERSN LDSDRRRSSI
101: GSQRILQTDF SLQNGCLIEV DQTHNRGSSV DRHRLKDVKN GLSASKELLK VLNRVWGVEE DQSVCLSLFS AMKAELDRSC IQVTKLIHEQ RYNNYHGEVD
201: VLLKQFEEEK ASWKLKEQDK IYAAITSIAK ELKVEKKLRK QTERLNKKLG KELADTKTSL SKATKELEGE KRAREILEQV CDELARGIGE DRAEVEELKR
301: QSVKVREEVE KEREMLQLAD VLREERVQMK LSEAKYQFEE KNAVVDKLRN DLEAYLRSKK GQEHGGESPN YERIKELERH LRETLPSTCY YQDKEKENGE
401: VLDNDDDDDN DSADSDLHSI ELNMDDNTKS YQWCSALQDD PKRCSVSNKS KGRRSISEKF PRQSISIERE TSDGIEWEFS AGGGKENMST FDTSDKGRSN
501: FDFSSQVWKK DCEDEIERYK MIKDLRDHIV SASQKTPSQQ SFSSPTKNWN LPSSDAERVI NEAFAVLQGA N
101: GSQRILQTDF SLQNGCLIEV DQTHNRGSSV DRHRLKDVKN GLSASKELLK VLNRVWGVEE DQSVCLSLFS AMKAELDRSC IQVTKLIHEQ RYNNYHGEVD
201: VLLKQFEEEK ASWKLKEQDK IYAAITSIAK ELKVEKKLRK QTERLNKKLG KELADTKTSL SKATKELEGE KRAREILEQV CDELARGIGE DRAEVEELKR
301: QSVKVREEVE KEREMLQLAD VLREERVQMK LSEAKYQFEE KNAVVDKLRN DLEAYLRSKK GQEHGGESPN YERIKELERH LRETLPSTCY YQDKEKENGE
401: VLDNDDDDDN DSADSDLHSI ELNMDDNTKS YQWCSALQDD PKRCSVSNKS KGRRSISEKF PRQSISIERE TSDGIEWEFS AGGGKENMST FDTSDKGRSN
501: FDFSSQVWKK DCEDEIERYK MIKDLRDHIV SASQKTPSQQ SFSSPTKNWN LPSSDAERVI NEAFAVLQGA N
001: MPRQNQSVEN LLLLGKIRKR GCSSPTSSTS SILREGYRFK RAIVVGKRGG STTPVPTWRL MGRSPSPRAS GALHAAASPS SHCGSKTGKV SAPAPVSARK
101: LAATLWEMNE MPSPRVVEEA APMIRKSRKE RIAPLPPPRS SVHSGSLPPH LSDPSHSPVS ERMERSGTGS RQRRASSTVQ KLRLGDCNVG ARDPINSGSF
201: MDIETRSRVE TPTGSTVGVK TRLKDCSNAL TTSKELLKII NRMWGQDDRP SSSMSLVSAL HSELERARLQ VNQLIHEHKP ENNDISYLMK RFAEEKAVWK
301: SNEQEVVEAA IESVAGELEV ERKLRRRFES LNKKLGKELA ETKSALMKAV KEIENEKRAR VMVEKVCDEL ARDISEDKAE VEELKRESFK VKEEVEKERE
401: MLQLADALRE ERVQMKLSEA KHQLEEKNAA VDKLRNQLQT YLKAKRCKEK TREPPQTQLH NEEAGDYLNH HISFGSYNIE DGEVENGNEE GSGESDLHSI
501: ELNIDNKSYK WPYGEENRGR KSTPRKSLSL QRSISDCVDW VVQSEKLQKS GDGGLDWGRS IDVEPKGYID ETQAYKPNKA SSKDHHILSG SRLSNFRGGS
601: VSKSRLSDAS KGENQNARKS RW
101: LAATLWEMNE MPSPRVVEEA APMIRKSRKE RIAPLPPPRS SVHSGSLPPH LSDPSHSPVS ERMERSGTGS RQRRASSTVQ KLRLGDCNVG ARDPINSGSF
201: MDIETRSRVE TPTGSTVGVK TRLKDCSNAL TTSKELLKII NRMWGQDDRP SSSMSLVSAL HSELERARLQ VNQLIHEHKP ENNDISYLMK RFAEEKAVWK
301: SNEQEVVEAA IESVAGELEV ERKLRRRFES LNKKLGKELA ETKSALMKAV KEIENEKRAR VMVEKVCDEL ARDISEDKAE VEELKRESFK VKEEVEKERE
401: MLQLADALRE ERVQMKLSEA KHQLEEKNAA VDKLRNQLQT YLKAKRCKEK TREPPQTQLH NEEAGDYLNH HISFGSYNIE DGEVENGNEE GSGESDLHSI
501: ELNIDNKSYK WPYGEENRGR KSTPRKSLSL QRSISDCVDW VVQSEKLQKS GDGGLDWGRS IDVEPKGYID ETQAYKPNKA SSKDHHILSG SRLSNFRGGS
601: VSKSRLSDAS KGENQNARKS RW
Arabidopsis Description
At3g11590/F24K9_26 [Source:UniProtKB/TrEMBL;Acc:Q9CAW9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.