CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90511
EER95307
EER95951
EER96069
EER97037
EER97413
EER97871
EES00093
EES00987
EES02002
EES02004
EES05205
EES11990
EES12241
KXG19224
KXG21997
KXG22102
KXG22364
KXG23810
KXG30263
KXG30464
KXG31606
KXG33434
KXG37365
KXG37592
KXG37982
KXG39393
OQU77880
OQU78405
OQU79022
OQU79520
OQU80422
OQU81548
OQU85551
OQU87530
OQU90452
OQU92181

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G11590.1	EER90511	AT1G01630.1	21798944
AT3G11590.1	EES02002	AT1G01630.1	21798944
AT3G11590.1	EES02004	AT1G01630.1	21798944
AT3G11590.1	KXG19224	AT1G31870.1	21798944
AT3G11590.1	EER95307	AT1G49850.1	21798944
AT3G11590.1	KXG23810	AT1G49850.1	21798944
AT3G11590.1	EES12241	AT1G54060.1	21798944
AT3G11590.1	KXG30464	AT1G54060.1	21798944
AT3G11590.1	KXG37592	AT2G30580.1	21798944
AT3G11590.1	KXG37982	AT2G30580.1	21798944
AT3G11590.1	OQU79520	AT2G30580.1	21798944
AT3G11590.1	EER97037	AT2G43370.1	21798944
AT3G11590.1	OQU79022	AT3G01690.1	21798944
AT3G11590.1	EER97871	AT3G06430.1	21798944
AT3G11590.1	OQU78405	AT3G50910.1	21798944
AT3G11590.1	OQU85551	AT3G50910.1	21798944
AT3G11590.1	KXG21997	AT3G56680.1	21798944
AT3G11590.1	KXG39393	AT4G15730.1	21798944
AT3G11590.1	OQU77880	AT4G15730.1	21798944
AT3G11590.1	OQU90452	AT4G15730.1	21798944
AT3G11590.1	EES00987	AT4G32660.1	21798944
AT5G22310.1	EER90511	AT1G01630.1	21798944
AT5G22310.1	EES02002	AT1G01630.1	21798944
AT5G22310.1	EES02004	AT1G01630.1	21798944
AT5G22310.1	EES00093	AT1G06390.1	21798944
AT5G22310.1	OQU92181	AT2G45920.1	21798944
AT5G22310.1	OQU79022	AT3G01690.1	21798944
AT5G22310.1	EES11990	AT3G11590.1	21798944
AT5G22310.1	KXG30263	AT3G11590.1	21798944
AT5G22310.1	EES05205	AT3G18710.1	21798944
AT5G22310.1	KXG22102	AT3G18710.1	21798944
AT5G22310.1	OQU81548	AT3G18710.1	21798944
AT5G22310.1	EER95951	AT3G22960.1	21798944
AT5G22310.1	KXG37365	AT3G22960.1	21798944
AT5G22310.1	EER96069	AT4G33690.1	21798944
AT5G22310.1	EER97413	AT4G33690.1	21798944
AT5G22310.1	EES11990	AT5G22310.1	21798944
AT5G22310.1	KXG30263	AT5G22310.1	21798944
AT5G22310.1	KXG22364	AT5G58950.1	21798944
AT5G22310.1	KXG31606	AT5G58950.1	21798944
AT5G22310.1	OQU80422	AT5G58950.1	21798944
AT5G22310.1	OQU87530	AT5G58950.1	21798944
AT5G22310.1	KXG33434	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d000402_P001	Maize	mitochondrion	71.06	80.66
Os02t0506100-00	Rice	plastid	34.73	49.54
TraesCS7B01G035800.1	Wheat	nucleus	43.89	47.23
TraesCS7D01G134000.1	Wheat	nucleus	43.57	46.8
TraesCS7A01G134600.1	Wheat	nucleus	43.57	46.8
EES11990	Sorghum	nucleus	37.78	41.37
Solyc06g074190.2.1	Tomato	nucleus	22.51	25.83
VIT_06s0080g00930.t01	Wine grape	plastid	27.01	25.77
Bra006620.1-P	Field mustard	nucleus	18.65	25.72
Solyc11g068720.1.1	Tomato	nucleus	25.72	25.24
GSMUA_Achr6P16290_001	Banana	nucleus	24.92	25.12
PGSC0003DMT400015076	Potato	nucleus	22.83	24.96
Bra002404.1-P	Field mustard	nucleus	19.29	24.79
CDX88802	Canola	nucleus	18.65	24.79
PGSC0003DMT400067737	Potato	nucleus	22.67	24.69
CDX70996	Canola	nucleus	18.81	24.63
Bra034827.1-P	Field mustard	plastid	24.28	24.59
CDY01038	Canola	plastid	24.12	24.59
CDX92367	Canola	mitochondrion, plastid	18.97	24.58
CDY08511	Canola	plastid	24.28	24.55
Solyc10g083190.1.1	Tomato	plastid	25.88	24.36
KRH30384	Soybean	plastid	25.88	24.32
KRH25284	Soybean	plastid	25.56	24.13
PGSC0003DMT400072353	Potato	plastid	25.4	24.12
AT3G11590.1	Thale cress	plastid	23.79	23.79
CDY67997	Canola	mitochondrion, plastid	18.01	23.78
VIT_08s0007g02790.t01	Wine grape	plastid	25.08	23.71
AT5G22310.1	Thale cress	nucleus	18.33	23.7
KRG96225	Soybean	nucleus	24.76	23.51
KRH67971	Soybean	plastid	24.92	23.48
Bra001412.1-P	Field mustard	nucleus	13.02	23.34
CDX73866	Canola	cytosol	12.7	21.41
CDY56601	Canola	cytosol, golgi, plastid	12.7	21.41
GSMUA_Achr6P08260_001	Banana	nucleus	19.29	20.94
EER97816	Sorghum	mitochondrion, plastid	18.17	18.99
EES01592	Sorghum	plastid	19.13	17.6
EES12886	Sorghum	plastid	18.17	16.33
EES19759	Sorghum	plastid	17.52	16.32
KXG29970	Sorghum	nucleus	16.56	14.71
OQU80028	Sorghum	plastid	15.59	14.7
OQU76466	Sorghum	nucleus	16.72	14.59

Protein Annotations

EnsemblPlants:KXG30263	EnsemblPlantsGene:SORBI_3004G153800	ncoils:Coil	PANTHER:PTHR31071	PANTHER:PTHR31071:SF16	ProteinID:KXG30263
ProteinID:KXG30263.1	ProteinID:OQU84984.1	SEG:seg	UniParc:UPI0007F30796	UniProt:A0A194YPV4	MapMan:35.2

Description

hypothetical protein

Coordinates

chr4:+:48609512..48614343

Molecular Weight (calculated)

68886.6 Da

IEP (calculated)

5.539

GRAVY (calculated)

-0.840

Length

622 amino acids

Sequence
(BLAST)

001: MLREAARLRR GVSTAATKIR KRCAVSPSWE LRAKRSVRLI GRSVGAASHC PSSSSSCSRI KRRMMSEPSW TNRRCRRHAG VEVETRSAAS ARKLVTALWQ
101: HGKGGSAFEE EDEEEGEVGW DDAAAKRRSS SDHRGSASVE VLSKLSRRKI KAFKDDGERS WHNGHAHAHG HCFSDVMSNG GTVGGCTPAR QGDGNRTIQM
201: QELYNSLTAS NELVRVLANV LGPTGGLTPT AASLLAALRS ELDAARQLVK QHRRGGGGED DYERRLRRQL AEEVRAWKCR HREKAAAAAR LVASELDGER
301: RSRRRAERVG KKLAEALADT EASLRAATRE LELERASRER LEKVCDELAR GVGGGGTEAE EEELRREAAT ALEELERERE MLQVADELRE ERVRMKLAEA
401: RLDFEEKNAV VDRLRQELET FLGTTNERQE ETPVHHELVS KDVVEDQQLQ QLVLASEFGV DGIDRVVTEK SGQEENAEAD ADADGDSDGS DIELNMDGNS
501: WSYTNTSRSR ETTTAAKNAA LSVSDRATEC GADVGAFDRR SEATRDAPEL EQEWAAADGC SDDGTTTKDM DEDAERYEAI KNLREQMLAG HAFLFLSKGE
601: TDADSDRQRH GFTSHFEDGG LW

Best Arabidopsis Sequence Match ( AT3G11590.2 )
(BLAST)

001: MERSGTGSRQ RRASSTVQKL RLGDCNVGAR DPINSGSFMD IETRSRVETP TGSTVGVKTR LKDCSNALTT SKELLKIINR MWGQDDRPSS SMSLVSALHS
101: ELERARLQVN QLIHEHKPEN NDISYLMKRF AEEKAVWKSN EQEVVEAAIE SVAGELEVER KLRRRFESLN KKLGKELAET KSALMKAVKE IENEKRARVM
201: VEKVCDELAR DISEDKAEVE ELKRESFKVK EEVEKEREML QLADALREER VQMKLSEAKH QLEEKNAAVD KLRNQLQTYL KAKRCKEKTR EPPQTQLHNE
301: EAGDYLNHHI SFGSYNIEDG EVENGNEEGS GESDLHSIEL NIDNKSYKWP YGEENRGRKS TPRKSLSLQR SISDCVDWVV QSEKLQKSGD GGLDWGRSID
401: VEPKGYIDET QAYKPNKASS KDHHILSGSR LSNFRGGSVS KSRLSDASKG ENQNARKSRW

Arabidopsis Description

At3g11590/F24K9_26 [Source:UniProtKB/TrEMBL;Acc:Q9CAW9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.