CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EER99396
EES00292
EES18924
KXG21152
KXG21387
KXG21391
KXG39705
OQU77498

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32660.1	EER99396	AT1G30860.1	21798944
AT4G32660.1	KXG39705	AT2G29210.1	21798944
AT4G32660.1	EES00292	AT2G37340.1	21798944
AT4G32660.1	EES18924	AT2G37340.1	21798944
AT4G32660.1	KXG21152	AT2G37340.1	21798944
AT4G32660.1	KXG21387	AT2G37340.1	21798944
AT4G32660.1	KXG21391	AT2G37340.1	21798944
AT4G32660.1	OQU77498	AT2G37340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G212200.2	Wheat	cytosol	93.01	92.53
TraesCS3D01G214800.2	Wheat	cytosol	92.75	92.27
TraesCS3B01G242600.2	Wheat	cytosol	92.75	92.27
Os01t0590900-01	Rice	nucleus	90.93	90.46
Zm00001d044338_P003	Maize	mitochondrion	90.16	88.78
HORVU3Hr1G051340.19	Barley	golgi, plasma membrane, plastid	91.97	84.52
KRH61991	Soybean	cytosol	62.69	74.01
KRH52649	Soybean	nucleus	76.42	73.2
VIT_04s0008g04220.t01	Wine grape	nucleus	75.91	72.89
Zm00001d011258_P001	Maize	cytosol, nucleus, plasma membrane	74.09	72.22
GSMUA_Achr8P04030_001	Banana	mitochondrion	83.16	69.78
AT4G32660.1	Thale cress	nucleus	70.73	68.25
CDX68873	Canola	nucleus	69.95	67.67
Bra011368.1-P	Field mustard	nucleus	69.69	67.59
CDX75268	Canola	nucleus	69.69	67.59
KRG94066	Soybean	cytosol	21.76	63.64
KXG33666	Sorghum	cytosol	68.91	61.29
KXG35096	Sorghum	cytosol	65.8	59.91
KXG30551	Sorghum	cytosol	64.51	55.83
KXG37288	Sorghum	cytosol	49.74	50.13
EER99321	Sorghum	cytosol	28.76	26.18
EER93458	Sorghum	nucleus	30.57	20.81
OQU80322	Sorghum	nucleus	26.17	16.45
OQU78157	Sorghum	nucleus, plastid	26.94	16.05
EER99364	Sorghum	cytosol	29.27	15.33
EES01706	Sorghum	nucleus	28.24	15.12
KXG24155	Sorghum	nucleus	30.31	12.24
KXG27048	Sorghum	nucleus	28.76	12.1
EES05664	Sorghum	nucleus	29.02	11.91
KXG37702	Sorghum	nucleus	27.46	9.63

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.2	Gene3D:3.30.200.20	UniProt:C5XPI8	EnsemblPlants:EES00987	ProteinID:EES00987
ProteinID:EES00987.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0046777	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF44
InterPro:Prot_kinase_dom	SMART:SM00220	EnsemblPlantsGene:SORBI_3003G203400	SUPFAM:SSF56112	unigene:Sbi.11164	InterPro:Ser/Thr_kinase_AS
UniParc:UPI00081AC656	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:53318206..53322927

Molecular Weight (calculated)

44986.9 Da

IEP (calculated)

8.778

GRAVY (calculated)

-0.513

Length

386 amino acids

Sequence
(BLAST)

001: MESSRSRKRT RQAYDYDAAP PPEREVVARG GVSPPWREDD RDGHYVFDLG ENLTRRYKIL SKMGEGTFGR VLECWDRETR EYVAIKVVRS IRKYRDAAMI
101: EIDVLNRLAE NEKYSSLCVQ IQRWFDYRNH ICIVFEKLGP SLYDFLKRNR YQPFPVELVR EFGRQLLQSV AYMHELRLIH TDLKPENILL VSSEYIKVPS
201: TKKNTQDEMH FKCLPKSSAI KLIDFGSTAF DNQDHNSIVS TRHYRAPEII LGLGWSFPCD IWSVGCILVE LCSGEALFQT HENLEHLAMM ERVLGPLPEH
301: MTRKASSSAQ KYFRRATRLN WPEGAVSRES IRAVRKLDRL KDLVSRNADH SKAALVDLLY SLLRFEPSER LTAQEALDHP FFRNPT

Best Arabidopsis Sequence Match ( AT4G32660.1 )
(BLAST)

001: MIANGFESMD KERVRKRPRM TWDEAPAEPE AKRAVIKGHG SDGRILSPPL RDDDRDGHYV FSLRDNLTPR YKILSKMGEG TFGRVLECWD RDTKEYVAIK
101: IIRSIKKYRD AAMIEIDVLQ KLVKSDKGRT RCVQMKNWFD YRNHICIVFE KLGPSLFDFL KRNKYSAFPL ALVRDFGCQL LESVAYMHEL QLVHTDLKPE
201: NILLVSSENV KLPDNKRSAA NETHFRCLPK SSAIKLIDFG STVCDNRIHH SIVQTRHYRS PEVILGLGWS YQCDLWSIGC ILFELCTGEA LFQTHDNLEH
301: LAMMERALGP LPEHMTRKAS RGAEKYFRRG CRLNWPEGAN SRESIRAVKR LDRLKDMVSK HVDNTRSRFA DLLYGLLAYD PSERLTANEA LDHPFFKSSS

Arabidopsis Description

AFC3At4g32660 [Source:UniProtKB/TrEMBL;Acc:A1L4Y9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.