CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0837900-01	Rice	nucleus	95.62	95.62
Zm00001d042938_P003	Maize	cytosol	97.23	94.2
TraesCS6A01G241200.1	Wheat	cytosol	92.63	92.63
TraesCS6D01G223400.1	Wheat	nucleus	92.4	92.4
HORVU6Hr1G061750.11	Barley	nucleus	92.4	92.18
TraesCS6B01G283400.1	Wheat	nucleus	92.17	92.17
VIT_08s0040g02640.t01	Wine grape	nucleus	80.41	81.35
GSMUA_Achr5P29170_001	Banana	nucleus	81.11	80.73
GSMUA_Achr9P03190_001	Banana	nucleus	80.18	79.82
PGSC0003DMT400061423	Potato	nucleus	77.88	78.42
KRH67569	Soybean	nucleus	77.88	76.13
Bra007012.1-P	Field mustard	cytosol	76.27	75.06
CDX78188	Canola	cytosol	76.27	72.75
CDX73543	Canola	nucleus	77.19	72.67
KRG95853	Soybean	cytosol	47.7	72.13
AT3G53570.1	Thale cress	cytosol	77.42	71.95
EES00987	Sorghum	mitochondrion	61.29	68.91
CDX76200	Canola	endoplasmic reticulum, plasma membrane, plastid	21.66	68.61
KXG35096	Sorghum	cytosol	65.67	67.22
KXG30551	Sorghum	cytosol	68.66	66.82
KXG37288	Sorghum	cytosol	51.84	58.75
CDY52749	Canola	nucleus	75.58	40.39
CDY07581	Canola	nucleus	75.12	38.86
EER99321	Sorghum	cytosol	25.58	26.18
EER93458	Sorghum	nucleus	27.19	20.81
OQU80322	Sorghum	nucleus	24.42	17.26
OQU78157	Sorghum	nucleus, plastid	25.58	17.13
EES01706	Sorghum	nucleus	26.04	15.67
EER99364	Sorghum	cytosol	25.81	15.2
KXG27048	Sorghum	nucleus	27.19	12.87
KXG24155	Sorghum	nucleus	28.34	12.87
EES05664	Sorghum	nucleus	27.65	12.77
KXG37702	Sorghum	nucleus	26.5	10.45

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.2	Gene3D:3.30.200.20	UniProt:A0A1B6Q6X7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	EnsemblPlants:KXG33666	ProteinID:KXG33666	ProteinID:KXG33666.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF44	InterPro:Prot_kinase_dom	SMART:SM00220
EnsemblPlantsGene:SORBI_3003G349300	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00022072A2	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:66921983..66926431

Molecular Weight (calculated)

50355.0 Da

IEP (calculated)

8.994

GRAVY (calculated)

-0.372

Length

434 amino acids

Sequence
(BLAST)

001: MEAQWLAEYP HQGSDKRPRK RPRLAWDVAP TLFQPPKAIP MLYCGQELIN GNFTTAFLPP PPIYYTGPPR NLSPPWRPDD KDGHYVFVVG ENLTPRYRIL
101: SKMGEGTFGQ VLECWDLENQ EAVAIKIVRS LQKYREAAMI EIDVLQRLGK NDFTGSRCVQ IRNWFDYRNH ICIVFEKLGP SLYDFLRKNS YRAFPIDLVR
201: EFARQILESV AFMHDLRLIH TDLKPENILL VSSESIRVPD YKVSIRPPKD GSFFKNLPKS SAIKLIDFGS TTFESQDHNY VVSTRHYRAP EVILGLGWNY
301: PCDLWSVGCI LVELCSGEAL FQTHENLEHL AMMERVLGPL PKHMIVRADR RAEKYFKRGV RLDWPEGAAS RESMKAVWKL PRLQNLVMQH VDHSAGDLID
401: LLQGLLRYDP NERLKAREAL RHPFFTRCIR RCGF

Best Arabidopsis Sequence Match ( AT3G53570.1 )
(BLAST)

001: MQSSVYRDKA SSIAMILETQ RNVEFPHRIV DKRPRKRPRL TWDAAPPLLP PPPPPTVFQP PLYYGPEFAS GLVPNFVYPN MFYNGLPRQG SPPWRPDDKD
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN

Arabidopsis Description

AFC1AT3G53570 protein [Source:UniProtKB/TrEMBL;Acc:B9DH08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.