CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78188	Canola	cytosol	97.18	98.46
AT3G53570.1	Thale cress	cytosol	95.01	93.79
VIT_08s0040g02640.t01	Wine grape	nucleus	76.14	81.82
KRH67569	Soybean	nucleus	74.62	77.48
KXG33666	Sorghum	cytosol	72.67	77.19
PGSC0003DMT400061423	Potato	nucleus	72.02	77.03
Os01t0837900-01	Rice	nucleus	72.45	76.96
CDX76200	Canola	endoplasmic reticulum, plasma membrane, plastid	22.78	76.64
TraesCS6A01G241200.1	Wheat	cytosol	71.58	76.04
HORVU6Hr1G061750.11	Barley	nucleus	71.58	75.86
TraesCS6D01G223400.1	Wheat	nucleus	71.37	75.81
TraesCS6B01G283400.1	Wheat	nucleus	70.93	75.35
GSMUA_Achr5P29170_001	Banana	nucleus	71.15	75.23
GSMUA_Achr9P03190_001	Banana	nucleus	70.07	74.08
Zm00001d042938_P003	Maize	cytosol	71.8	73.88
KRG95853	Soybean	cytosol	45.77	73.52
CDX68873	Canola	nucleus	53.15	61.4
CDX75268	Canola	nucleus	52.93	61.31
CDY52749	Canola	nucleus	92.62	52.59
CDY07581	Canola	nucleus	91.97	50.54
CDY34307	Canola	plastid	65.73	41.68
CDY03422	Canola	plastid	65.51	41.54
CDY50618	Canola	cytosol	23.64	25.47
CDY07839	Canola	mitochondrion	16.05	25.26
CDX75507	Canola	nucleus	24.3	25.23
CDX69144	Canola	nucleus	24.08	25.17
CDY40627	Canola	nucleus	24.08	25.17
CDX72542	Canola	nucleus	23.86	25.0
CDY24345	Canola	cytosol	23.64	24.94
CDX78145	Canola	nucleus	27.11	22.85
CDY09171	Canola	nucleus	24.08	22.38
CDY26961	Canola	nucleus	25.16	21.6
CDX92332	Canola	nucleus	24.95	21.46
CDY06452	Canola	plasma membrane	24.08	20.9
CDX73580	Canola	nucleus	26.9	19.56
CDX93215	Canola	cytosol	24.3	19.55
CDY07061	Canola	cytosol	24.3	19.51
CDX74804	Canola	cytosol	23.64	18.57
CDY65761	Canola	nucleus	23.21	18.26
CDX74622	Canola	nucleus	25.38	12.94
CDY37643	Canola	nucleus	25.16	12.72
CDY13591	Canola	nucleus	23.86	12.42
CDY38548	Canola	nucleus	25.16	12.35
CDX83561	Canola	nucleus	23.43	11.97
CDX92157	Canola	nucleus	24.73	11.15
CDX95825	Canola	nucleus	24.73	10.88
CDX72990	Canola	nucleus	24.95	10.83
CDX96477	Canola	nucleus	24.95	10.67
CDY11106	Canola	nucleus	24.73	9.97
CDX68227	Canola	nucleus	24.95	9.66
CDY04183	Canola	cytosol, nucleus, plasma membrane	24.51	8.55
CDY39184	Canola	nucleus	23.43	7.9
CDY03423	Canola	cytosol, peroxisome, plastid	1.52	2.24

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.2	Gene3D:3.30.200.20	GO:A0A078CF25	EnsemblPlants:CDX73543	ProteinID:CDX73543
ProteinID:CDX73543.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00109073001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF44	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE7534	SEG:seg	:

Description

BnaC08g24600D

Coordinates

chrLK031799:+:1073444..1076346

Molecular Weight (calculated)

53406.3 Da

IEP (calculated)

9.475

GRAVY (calculated)

-0.446

Length

461 amino acids

Sequence
(BLAST)

001: MQSSVHREKP SSIAMILETH RNIEFPHRIV DKRPRKRPRL AWDAAPPPPT VFHPPLYYGQ EFASGVAPSF VYPNMFYNNG FPRQGSPPWR PDDKDGHFVF
101: VVGDSLTPRY QILSKMGEGT FGQVLECFDN KNKEAVAIKV IRSVNKYREA AMIEIDVLQR LTRHDVGGSR CVQIRNWFDY RNHICIVFEK LGPSLYDFLR
201: KNSYRSFPID LVRELGRQLL ESVAYMHDLR LIHTDLKPEN ILLVSSEYIK IPDYKFLSRP TKDGSYFKNL PKSSAIKLID FGSTTFEHQD HNYIVSTRHY
301: RAPEVILGVG WNYPCDLWSI GCILVELCSG EALFQTHENL EHLAMMERVL GPLPPHMVLR ADRRSERYFR RGAKLDWPEG ATSRDSLKAV WKLPRLPNLI
401: MQHVDHSAGD LIDLLQGLLR YDPAVRLKAR EALNHPFFTR SREQSIPFNP NPGPFLYNHK N

Best Arabidopsis Sequence Match ( AT3G53570.1 )
(BLAST)

001: MQSSVYRDKA SSIAMILETQ RNVEFPHRIV DKRPRKRPRL TWDAAPPLLP PPPPPTVFQP PLYYGPEFAS GLVPNFVYPN MFYNGLPRQG SPPWRPDDKD
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN

Arabidopsis Description

AFC1AT3G53570 protein [Source:UniProtKB/TrEMBL;Acc:B9DH08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.