Factsheet for GSMUA_Achr5P29170_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P03190_001	Banana	nucleus	88.99	88.99
VIT_08s0040g02640.t01	Wine grape	nucleus	82.57	83.92
Os01t0837900-01	Rice	nucleus	81.19	81.57
KXG33666	Sorghum	cytosol	80.73	81.11
HORVU6Hr1G061750.11	Barley	nucleus	80.28	80.46
TraesCS6A01G241200.1	Wheat	cytosol	80.05	80.41
PGSC0003DMT400061423	Potato	nucleus	79.36	80.28
TraesCS6D01G223400.1	Wheat	nucleus	79.82	80.18
TraesCS6B01G283400.1	Wheat	nucleus	79.59	79.95
GSMUA_Achr8P28600_001	Banana	cytosol	39.45	79.63
Zm00001d042938_P003	Maize	cytosol	80.73	78.57
GSMUA_Achr11P...	Banana	cytosol	61.01	78.47
KRH67569	Soybean	nucleus	77.52	76.13
Bra007012.1-P	Field mustard	cytosol	74.54	73.7
KRG95853	Soybean	cytosol	47.48	72.13
CDX78188	Canola	cytosol	74.54	71.43
CDX73543	Canola	nucleus	75.23	71.15
AT3G53570.1	Thale cress	cytosol	75.92	70.88
CDX76200	Canola	endoplasmic reticulum, plasma membrane, plastid	20.64	65.69
GSMUA_Achr3P17160_001	Banana	cytosol	66.74	64.81
GSMUA_Achr8P04030_001	Banana	mitochondrion	63.53	60.22
CDY52749	Canola	nucleus	73.85	39.66
CDY07581	Canola	nucleus	74.08	38.5
GSMUA_Achr11P...	Banana	cytosol	20.64	31.14
GSMUA_Achr4P11760_001	Banana	cytosol	24.77	29.19
GSMUA_Achr5P11070_001	Banana	cytosol	24.54	26.1
GSMUA_Achr8P26710_001	Banana	cytosol	25.92	25.51
GSMUA_Achr1P02800_001	Banana	cytosol	23.62	24.88
GSMUA_Achr2P11360_001	Banana	cytosol	25.0	24.66
GSMUA_Achr8P04590_001	Banana	nucleus	26.61	24.27
GSMUA_Achr4P18950_001	Banana	nucleus	25.69	15.95
GSMUA_AchrUn_...	Banana	nucleus	25.69	15.73
GSMUA_Achr10P...	Banana	nucleus	20.64	13.98
GSMUA_Achr8P14500_001	Banana	nucleus	26.15	11.83
GSMUA_Achr3P02060_001	Banana	nucleus	26.83	11.77
GSMUA_Achr1P22430_001	Banana	mitochondrion	27.06	11.48
GSMUA_Achr1P12470_001	Banana	nucleus	27.29	10.98
GSMUA_Achr2P21700_001	Banana	nucleus	27.75	10.89
GSMUA_Achr11P...	Banana	nucleus	27.06	10.76
GSMUA_Achr7P11320_001	Banana	nucleus	27.06	9.18
GSMUA_Achr11P...	Banana	nucleus	5.5	3.85

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr5G29170_001
EnsemblPlants:GSMUA_Achr5P29170_001	EnsemblPlants:GSMUA_Achr5T29170_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0T2P1	PFAM:PF00069
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF44	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294AF35	SEG:seg	:	:

Description

Serine/threonine-protein kinase AFC1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G29170_001]

Coordinates

chr5:+:29028010..29033319

Molecular Weight (calculated)

50455.0 Da

IEP (calculated)

8.730

GRAVY (calculated)

-0.380

Length

436 amino acids

Sequence
(BLAST)

001: METQWIAELP HAATDKRPRK RPRLAWDVPP PIPPSMVPLT LYCGMEAAQM ATMNQHLQSF YYGGVPRYCS PPWRGDDKDG HYIFGIGENL TPRYRILNKM
101: GEGTFGQVLE CWDLENKEPV AIKIVRSLQK YREAAMIEID VLQRLAKADR SGTRCVQIRN WFDYRNHICI VFEKLGPSLY DFLRRNSYRS FPIDLVRELA
201: GQLLESVAFM HDLRLIHTDL KPENILLVSS EYIKVPDHKF LSRSAKDGSL FKNLPKSSAI KLIDFGSTTF EHQDHSYVVS TRHYRAPEVI LGLGWNYPCD
301: MWSVGCILVE LCSGEALFQT HENLEHLAMM EKVLGPLPQH MIVRANQRAE KYFRQGRGLR LDWPEGATSR ESIRAVWRLP RLQNLVMQHV DHSAGDLIDL
401: LQGLLHYDPA QRLKAREALR HPFFTRDLRR CGYSLN

Best Arabidopsis Sequence Match ( AT3G53570.1 )
(BLAST)

001: MQSSVYRDKA SSIAMILETQ RNVEFPHRIV DKRPRKRPRL TWDAAPPLLP PPPPPTVFQP PLYYGPEFAS GLVPNFVYPN MFYNGLPRQG SPPWRPDDKD
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN

Arabidopsis Description

AFC1AT3G53570 protein [Source:UniProtKB/TrEMBL;Acc:B9DH08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.