Factsheet for GSMUA_Achr4P11760_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P11070_001	Banana	cytosol	75.95	68.54
GSMUA_Achr2P11360_001	Banana	cytosol	81.08	67.87
EER99321	Sorghum	cytosol	77.57	67.69
Zm00001d006308_P001	Maize	plastid	76.76	66.98
GSMUA_Achr1P02800_001	Banana	cytosol	74.86	66.91
Os09t0552300-01	Rice	cytosol	75.14	66.03
CDY50618	Canola	cytosol	74.86	64.72
TraesCS5D01G359900.2	Wheat	cytosol	73.51	64.3
VIT_07s0031g02130.t01	Wine grape	cytosol	76.76	63.96
Bra017716.1-P	Field mustard	nucleus	74.05	63.72
TraesCS5A01G352900.1	Wheat	cytosol	72.7	63.15
TraesCS5B01G355100.1	Wheat	cytosol	72.43	63.06
Bra002070.1-P	Field mustard	cytosol	74.32	62.93
HORVU5Hr1G002400.1	Barley	mitochondrion	45.41	62.92
AT2G17530.1	Thale cress	cytosol	74.59	62.73
CDY40627	Canola	nucleus	74.59	62.59
CDX72542	Canola	nucleus	74.32	62.5
KRH07798	Soybean	cytosol	75.14	62.47
Bra011619.1-P	Field mustard	nucleus	74.86	62.39
CDX69144	Canola	nucleus	74.32	62.36
CDY24345	Canola	cytosol	73.51	62.24
CDX75507	Canola	nucleus	74.59	62.16
KRH39422	Soybean	cytosol	74.59	62.02
KRH28929	Soybean	nucleus	74.05	61.57
KRH76530	Soybean	nucleus	73.78	61.35
PGSC0003DMT400003820	Potato	cytosol	73.78	61.21
PGSC0003DMT400045066	Potato	cytosol	74.05	61.16
Solyc02g082550.2.1	Tomato	cytosol	73.51	60.99
AT4G35500.2	Thale cress	cytosol	71.89	60.59
Bra028159.1-P	Field mustard	cytosol	57.3	57.61
HORVU5Hr1G087690.2	Barley	cytosol, plastid	72.97	54.55
CDY07839	Canola	mitochondrion	42.97	54.27
GSMUA_Achr8P26710_001	Banana	cytosol	62.43	52.14
GSMUA_Achr8P04590_001	Banana	nucleus	61.08	47.28
GSMUA_Achr11P...	Banana	cytosol	24.59	31.49
GSMUA_Achr8P28600_001	Banana	cytosol	17.57	30.09
GSMUA_Achr11P...	Banana	cytosol	27.03	29.5
GSMUA_Achr5P29170_001	Banana	nucleus	29.19	24.77
GSMUA_Achr9P03190_001	Banana	nucleus	28.92	24.54
GSMUA_Achr3P17160_001	Banana	cytosol	28.11	23.16
GSMUA_Achr8P04030_001	Banana	mitochondrion	28.11	22.61
GSMUA_Achr4P18950_001	Banana	nucleus	29.73	15.67
GSMUA_Achr10P...	Banana	nucleus	25.95	14.91
GSMUA_AchrUn_...	Banana	nucleus	28.65	14.89
GSMUA_Achr8P14500_001	Banana	nucleus	30.0	11.51
GSMUA_Achr3P02060_001	Banana	nucleus	30.27	11.27
GSMUA_Achr1P22430_001	Banana	mitochondrion	29.73	10.7
GSMUA_Achr2P21700_001	Banana	nucleus	31.08	10.35
GSMUA_Achr1P12470_001	Banana	nucleus	30.0	10.24
GSMUA_Achr11P...	Banana	nucleus	30.0	10.12
GSMUA_Achr7P11320_001	Banana	nucleus	30.81	8.86
GSMUA_Achr11P...	Banana	nucleus	5.41	3.21

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.5	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr4G11760_001	EnsemblPlants:GSMUA_Achr4P11760_001	EnsemblPlants:GSMUA_Achr4T11760_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0SN41
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24055	PANTHER:PTHR24055:SF138
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029632C1
SEG:seg	:	:	:	:	:

Description

Serine/threonine-protein kinase SRPK1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G11760_001]

Coordinates

chr4:+:8572524..8575223

Molecular Weight (calculated)

41631.9 Da

IEP (calculated)

6.838

GRAVY (calculated)

-0.240

Length

370 amino acids

Sequence
(BLAST)

001: MSCSPSSGSG EDEGVDAYRK GGYHAVRVGD AFAGGRYVAQ RKLGWGHFST VWLAYDTLSS KFVALKIQKS AKEYTQAALH ETELLSAIAD GDPSNSKCVV
101: RLLDHFMHAG PNGQHYCLVV ESLGDSLLRL IRYNRNKGIG LNRVKTICRS ILVGLDYLHR ELGIIHTDLK PENVLLVSTI NPAKDPVRSK FTPILERPEG
201: LDGIDLRCKV VDFGNACLFD NQISDDIQTR QYRAPEVIIG LGYSFSVDMW SFACIAFELA TGDLLFAPKN SPEFTEDEDH LALMMELLGR MPRQIATAGS
301: RSKDLFDRYG DLKRIRRLKF LRLDRLLVDK YKFSETDANS FMEFLCPLLD FDPEKRPTAA QCLQHPWLNE

Best Arabidopsis Sequence Match ( AT2G17530.3 )
(BLAST)

001: MSCSSSSGSE EDDEGFDAYR KGGYHAVRIG DQFAGGRYIA QRKLGWGQFS TVWLAYDTRT SNYVALKIQK SALQFAQAAL HEIELLQAAA DGDPENTKCV
101: IRLIDDFKHA GPNGQHLCMV LEFLGDSLLR LIKYNRYKGM ELSKVREICK CILTGLDYLH RELGMIHSDL KPENILLCST IDPAKDPIRS GLTPILEKPE
201: GNQNGTSTMN LIEKKLKRRA KKAAAKISGR RVSIVGLSET PKKNKRNLDG IDMRCKVVDF GNGCWADNKF AEEIQTRQYR APEVILQSGY SYSVDMWSFA
301: CTAFELATGD MLFAPKEGNG YGEDEDHLAL MMELLGKMPR KIAIGGARSK DYFDRHGDLK RIRRLKYWPL DRLLIDKYKL PEAEAREFAD FLCPIMDFAP
401: EKRPTAQQCL QHPWLNLRTQ NNEDDIEGQM SNMQIKGSCS

Arabidopsis Description

At2g17530 [Source:UniProtKB/TrEMBL;Acc:Q9SHL5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.