Factsheet for PGSC0003DMT400045066

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003820	Potato	cytosol	85.27	85.65
VIT_07s0031g02130.t01	Wine grape	cytosol	77.23	77.93
CDY50618	Canola	cytosol	72.99	76.4
CDY24345	Canola	cytosol	74.11	75.97
Bra002070.1-P	Field mustard	cytosol	73.88	75.74
KRH07798	Soybean	cytosol	74.33	74.83
Bra017716.1-P	Field mustard	nucleus	71.21	74.19
GSMUA_Achr4P11760_001	Banana	cytosol	61.16	74.05
AT2G17530.1	Thale cress	cytosol	72.32	73.64
KRH39422	Soybean	cytosol	72.99	73.48
CDY40627	Canola	nucleus	72.32	73.47
KRH76530	Soybean	nucleus	72.32	72.81
KRH28929	Soybean	nucleus	72.32	72.81
CDX72542	Canola	nucleus	71.43	72.73
GSMUA_Achr2P11360_001	Banana	cytosol	71.43	72.4
CDX75507	Canola	nucleus	71.43	72.07
Bra011619.1-P	Field mustard	nucleus	71.43	72.07
GSMUA_Achr5P11070_001	Banana	cytosol	65.85	71.95
CDX69144	Canola	nucleus	70.54	71.66
AT4G35500.2	Thale cress	cytosol	69.2	70.61
GSMUA_Achr1P02800_001	Banana	cytosol	64.51	69.81
Bra028159.1-P	Field mustard	cytosol	56.03	68.21
Os09t0552300-01	Rice	cytosol	62.95	66.98
EER99321	Sorghum	cytosol	63.39	66.98
Zm00001d006308_P001	Maize	plastid	62.95	66.51
HORVU5Hr1G002400.1	Barley	mitochondrion	38.84	65.17
CDY07839	Canola	mitochondrion	41.96	64.16
TraesCS5D01G359900.2	Wheat	cytosol	60.04	63.59
TraesCS5B01G355100.1	Wheat	cytosol	59.82	63.06
TraesCS5A01G352900.1	Wheat	cytosol	59.82	62.91
HORVU5Hr1G087690.2	Barley	cytosol, plastid	60.71	54.95
PGSC0003DMT400021639	Potato	nucleus	54.24	46.29
PGSC0003DMT400006951	Potato	mitochondrion, nucleus	54.24	44.42
PGSC0003DMT400018439	Potato	nucleus	51.79	42.49
TraesCS2D01G246700.1	Wheat	nucleus	65.18	42.07
TraesCS2B01G258500.1	Wheat	nucleus	65.18	42.07
TraesCS2A01G244200.2	Wheat	nucleus	64.96	41.93
Zm00001d021342_P017	Maize	cytosol	66.29	40.68
EER99364	Sorghum	cytosol	65.85	40.03
HORVU2Hr1G053190.2	Barley	cytosol	64.73	38.98
Zm00001d006355_P011	Maize	cytosol	65.18	37.01
PGSC0003DMT400079686	Potato	cytosol	20.31	31.6
PGSC0003DMT400069308	Potato	golgi, vacuole	23.21	28.57
Os07t0472400-01	Rice	plasma membrane	33.04	27.26
PGSC0003DMT400030615	Potato	nucleus	24.33	25.41
PGSC0003DMT400061423	Potato	nucleus	23.44	24.36
PGSC0003DMT400046853	Potato	cytosol	23.44	24.31
PGSC0003DMT400043636	Potato	cytosol	25.0	17.13
PGSC0003DMT400053226	Potato	mitochondrion	23.21	12.44
PGSC0003DMT400033770	Potato	mitochondrion	24.33	10.51
PGSC0003DMT400069307	Potato	nucleus	2.23	1.14
PGSC0003DMT400079685	Potato	nucleus	2.01	1.03
PGSC0003DMT400068117	Potato	nucleus	0.67	0.71

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102590044	MapMan:18.4.3.5	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1BH16	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400017474
PGSC:PGSC0003DMG400017474	EnsemblPlants:PGSC0003DMT400045066	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24055
PANTHER:PTHR24055:SF138	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000296BF2F	RefSeq:XP_006340000.1	SEG:seg	:	:	:

Description

Srpk [Source:PGSC_GENE;Acc:PGSC0003DMG400017474]

Coordinates

chr2:+:19164640..19168910

Molecular Weight (calculated)

49930.8 Da

IEP (calculated)

8.527

GRAVY (calculated)

-0.413

Length

448 amino acids

Sequence
(BLAST)

001: MSGSPSSSSA SEDEDEGIDS YRKGGYHAVR IGDSFSGGRY IAQRKLGWGE FSTVWLAYDT RSSEFVALKI QKSAPQFAQA ALHEIEVLSA IADGDPSNSK
101: YVVRLIDHFK HTGPNGQHSC MVLEFLGDSL LRLVKYNRYK GLELDKVRDI CKCILIGLDY LHRELGIIHT DLKLENVLLL STINATQDPI RSGTPPILER
201: PEGIPNGGAT MNIIEKKLKQ RARRAAARIS GRRASMGGVG GGAKTNRSLD GIDLKCKVVD FGSACWADKQ FAQEIQTRQY RSPEVILQSG YSFSADMWSF
301: ACIAFELATG EMMFTPKGGQ GFSEDEDHLA MMMELLGKIP RKIANGGARS KDYFDRYGDL KRIRRLKYGS LEKLLIDKFR FSETDALEFA KFLCPLLDFE
401: PENRPTAQQC SQHPWLNITS QNQTEVKSES GLEKVNVGMR NLQMKAGK

Best Arabidopsis Sequence Match ( AT4G35500.1 )
(BLAST)

001: MSCSSSSGSE GEEEGFDAYR KGGYHAVRIG DPFSGGRYIA QRKLGWGQFS TVWLAYDTLT STYVALKIQK SAQQFAQAAL HEIEFLSAAA DGDLDKTKCV
101: VRLIDHFKHS GPNGQHLCMV LEFLGDSLLR LIRYNQYKGL KLNKVREICR CILTGLDYLH RELGMIHSDL KPENILLCST IDPAKDPVRS GLTPLLEKPE
201: GNANGGASTM NLIEKKLKRR AKRAVAKISE RRVSMVTGEE ASSKTEKSLD GIDMRCKVVD FGNACWADKQ FAEEIQTRQY RAPEVILKSG YSFSVDMWSF
301: GCTAFELVTG DMLFAPKDGN GYGEDEDHLA LMMELLGKMP RKIAIGGAKS KDYFDRHGDL KRIRRLKYWP LDRLLIDKYK LPEAEAKEFA EFLTPILEFA
401: PEKRPTAQQC LDHPWMNVTT QNDAENVDDQ MNNLHIKG

Arabidopsis Description

Protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4JN22]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.