Factsheet for PGSC0003DMT400068117

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P26710_001	Banana	cytosol	2.37	2.26
GSMUA_Achr8P04590_001	Banana	nucleus	2.37	2.09
PGSC0003DMT400079686	Potato	cytosol	1.18	1.74
PGSC0003DMT400069308	Potato	golgi, vacuole	1.18	1.37
Zm00001d013273_P003	Maize	nucleus	1.66	1.24
Zm00001d034010_P002	Maize	mitochondrion, nucleus	1.66	1.11
PGSC0003DMT400006951	Potato	mitochondrion, nucleus	1.42	1.1
EER93458	Sorghum	nucleus	1.42	1.06
PGSC0003DMT400061423	Potato	nucleus	0.95	0.93
HORVU5Hr1G094810.3	Barley	nucleus	1.18	0.89
TraesCS5D01G397000.1	Wheat	nucleus	1.18	0.89
TraesCS5B01G392200.1	Wheat	nucleus	1.18	0.89
TraesCS5A01G387100.1	Wheat	nucleus	1.18	0.89
PGSC0003DMT400018439	Potato	nucleus	0.95	0.73
PGSC0003DMT400003820	Potato	cytosol	0.71	0.67
PGSC0003DMT400045066	Potato	cytosol	0.71	0.67
PGSC0003DMT400043636	Potato	cytosol	0.47	0.31
HORVU6Hr1G081350.5	Barley	nucleus	0.24	0.28
PGSC0003DMT400030615	Potato	nucleus	0.24	0.23
PGSC0003DMT400046853	Potato	cytosol	0.24	0.23
PGSC0003DMT400033770	Potato	mitochondrion	0.47	0.19
PGSC0003DMT400021639	Potato	nucleus	0.24	0.19
PGSC0003DMT400053226	Potato	mitochondrion	0.24	0.12
PGSC0003DMT400079685	Potato	nucleus	0.24	0.11
HORVU1Hr1G094650.1	Barley	nucleus	0.0	0.0
HORVU2Hr1G091920.1	Barley	cytosol	0.0	0.0
HORVU1Hr1G082710.1	Barley	nucleus, plastid	0.0	0.0
HORVU3Hr1G049750.1	Barley	mitochondrion	0.0	0.0
HORVU3Hr1G021740.1	Barley	cytosol	0.0	0.0
HORVU3Hr1G021690.1	Barley	cytosol	0.0	0.0
HORVU1Hr1G034750.1	Barley	cytosol	0.0	0.0
HORVU5Hr1G046420.1	Barley	nucleus	0.0	0.0
PGSC0003DMT400069307	Potato	nucleus	0.0	0.0
HORVU4Hr1G018630.1	Barley	cytosol, mitochondrion, nucleus, plastid	0.0	0.0
HORVU2Hr1G066530.1	Barley	nucleus	0.0	0.0
HORVU4Hr1G059640.3	Barley	golgi, mitochondrion, plasma membrane	0.0	0.0
Os03t0748400-01	Rice	nucleus	0.0	0.0
HORVU7Hr1G121360.1	Barley	cytosol, mitochondrion, nucleus	0.0	0.0
HORVU7Hr1G090500.1	Barley	cytosol	0.0	0.0
HORVU7Hr1G058230.1	Barley	cytosol	0.0	0.0
HORVU6Hr1G019910.4	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400068117	EnsemblPlantsGene:PGSC0003DMG400026492	PANTHER:PTHR24058	PANTHER:PTHR24058:SF68	PGSC:PGSC0003DMG400026492	SEG:seg
UniParc:UPI0002966310	UniProt:M1CIG9	MapMan:27.7.3	:	:	:

Description

Protein kinase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400026492]

Coordinates

chr3:+:46366522..46370494

Molecular Weight (calculated)

44919.4 Da

IEP (calculated)

9.235

GRAVY (calculated)

-0.801

Length

422 amino acids

Sequence
(BLAST)

001: MQYAHVGSYG SLGSHGSYHD GAALGSSYGS YGDNSNLHAF YSPAGPSGMH LYAQNGVSIL GSSPDTRRFK QLPHGNGLGV SPGNFVPMSL GTSPSQFTPP
101: SMYSQISAGS PGNYGPSSPS RGSCHGSPLG KMAAGSQYNR RKGWVYPGSY QSQEISSSSH WQGQVADGNN SSQANSPVFG GSLMHIHSNS NPRQQGSNSV
201: NVGFSNAHNI TSPSMLGGHA QFQKTQGDKP DASNSLPDPG DWDPNYSEEL FLQEDSSEMS NLSSEFSKGM HLGQAGVSQE PFAGVRRPNQ ISNLNPSMSQ
301: RPTGQTQAFL PGEVGSPPSG HELHGGYMHN MVNPSYLMPH FAQSSPSRLG QQPPLHRFNQ GRATAVHYNE NHAMAQSSHS TYNADNPLSA ARNGASWGRR
401: GSNPLPNIPP TSRTRKDYKR IA

Best Arabidopsis Sequence Match ( AT5G35980.1 )
(BLAST)

001: MDDIDSSDGA AAARAGEIGS IGVSTPWKPI QLVFKRYLPQ NGSASKVHVA VKKPVVVRLT RDLVETYKIC DPQFKYRGEL NPKRYLTTPS VGVNNDGFDN
101: VNYDLILAVN DDFCSSDSRQ RYIVKDLLGH GTFGQVAKCW VPETNSFVAV KVIKNQLAYY QQALVEVSIL TTLNKKYDPE DKNHIVRIYD YFLHQSHLCI
201: CFELLDMNLY ELIKINQFRG LSLSIVKLFS KQILLGLALL KDAGIIHCDL KPENILLCAS VKPTEIKIID FGSACMEDKT VYSYIQSRYY RSPEVLLGYQ
301: YTTAIDMWSF GCIVAELFLG LPLFPGGSEF DILRRMIEIL GKQPPDYVLK EAKNTNKFFK CVGSVHNLGN GGTYGGLKSA YMALTGEEFE AREKKKPEIG
401: KEYFNHKNLE EIVKSYPYKI NLPEDDVVKE TQIRLALIDF LKGLMEFDPA KRWSPFQAAK HPFITGEPFT CPYNPPPETP RVHVTQNIKV DHHPGEGHWF
501: AAGLSPHVSG RTRIPMHNSP HFQMMPYSHA NSYGSIGSYG SYNDGTIQDN SYGSYGGTGN MFAYYSPVNH PGLYMQNQGG VSMLGTSPDA RRRVMQYPHG
601: NGPNGLGTSP SAGNFAPLPL GTSPSQFTPN TNNQFLAGSP GHHGPTSPVR NSCHGSPLGK MAAFSQINRR MSAGYSGGSQ SQDSSLSQAQ GHGMDNFYQN
701: EGYSGQFSGS PSRRQLDSGV KNRKQTQGGT TLSTGYSTHN NANSSLRSNM YNPSSTAHHL ENPDTALSVP DPGDWDPNYS DDLLLEEDSA DESSLANAFS
801: RGMQLGSTDA SSYSRRFNSN ASTSSSNPTT QRRYAPNQAF SQVETGSPPS NDPHARFGQH IPGSQYIPHV SQNSPSRLGQ QPPQRYNHGR PNAGRTMDRN
901: HMNAQLPPSN TNSGGQQRSP RSSSYTNGVP WGRRTNNHVP NVPSTSHGRV DYGSIA

Arabidopsis Description

YAK1Dual specificity protein kinase YAK1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q8RWH3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.