Factsheet for PGSC0003DMT400043636

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g051510.2.1	Tomato	cytosol	75.54	95.18
KRH63030	Soybean	cytosol, nucleus	30.73	75.85
PGSC0003DMT400079686	Potato	cytosol	30.12	68.4
PGSC0003DMT400069308	Potato	golgi, vacuole	35.93	64.56
AT2G40120.1	Thale cress	cytosol	54.43	62.46
CDX74804	Canola	cytosol	54.59	60.82
CDX93215	Canola	cytosol	53.06	60.56
Bra004984.1-P	Field mustard	cytosol	54.43	60.54
CDY65761	Canola	nucleus	54.13	60.41
CDY07061	Canola	cytosol	52.75	60.1
VIT_13s0067g00960.t01	Wine grape	cytosol	63.91	57.42
Bra017026.1-P	Field mustard	cytosol	48.62	57.19
KRH14940	Soybean	nucleus	59.02	54.37
KRH73194	Soybean	nucleus	59.94	53.92
Os05t0466900-01	Rice	cytosol, nucleus	43.43	46.94
EES01706	Sorghum	nucleus	51.38	46.6
Os01t0832900-01	Rice	nucleus	51.38	46.09
TraesCS3D01G345700.2	Wheat	nucleus	50.76	45.86
TraesCS3A01G351500.1	Wheat	nucleus	50.46	45.83
TraesCS3B01G384000.1	Wheat	nucleus	50.92	45.74
OQU78157	Sorghum	nucleus, plastid	45.26	45.68
Zm00001d042979_P007	Maize	nucleus	51.22	45.15
HORVU1Hr1G071160.1	Barley	nucleus	47.55	43.68
TraesCS1D01G290600.1	Wheat	cytosol	46.94	43.36
TraesCS1A01G292100.1	Wheat	cytosol	46.94	43.24
TraesCS1B01G301500.1	Wheat	cytosol	46.79	43.22
Zm00001d010578_P003	Maize	cytosol, plastid	46.64	43.14
GSMUA_Achr4P18950_001	Banana	nucleus	45.41	42.31
GSMUA_Achr10P...	Banana	nucleus	40.98	41.61
Zm00001d012452_P004	Maize	nucleus	48.78	40.95
PGSC0003DMT400061423	Potato	nucleus	16.82	25.52
PGSC0003DMT400030615	Potato	nucleus	16.67	25.41
PGSC0003DMT400003820	Potato	cytosol	17.28	25.34
PGSC0003DMT400046853	Potato	cytosol	16.67	25.23
PGSC0003DMT400045066	Potato	cytosol	17.13	25.0
PGSC0003DMT400021639	Potato	nucleus	16.51	20.57
PGSC0003DMT400006951	Potato	mitochondrion, nucleus	17.13	20.48
PGSC0003DMT400018439	Potato	nucleus	16.51	19.78
PGSC0003DMT400053226	Potato	mitochondrion	17.43	13.64
PGSC0003DMT400033770	Potato	mitochondrion	19.88	12.54
PGSC0003DMT400069307	Potato	nucleus	9.94	7.42
PGSC0003DMT400079685	Potato	nucleus	9.63	7.22
PGSC0003DMT400068117	Potato	nucleus	0.31	0.47

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102600192	MapMan:18.4.3.3	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1BEZ7	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400016943
PGSC:PGSC0003DMG400016943	EnsemblPlants:PGSC0003DMT400043636	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF56
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002965D4E	RefSeq:XP_015163888.1
SEG:seg	:	:	:	:	:

Description

Hypothetical Ser-Thr protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400016943]

Coordinates

chr6:-:26931300..26936436

Molecular Weight (calculated)

75176.2 Da

IEP (calculated)

4.418

GRAVY (calculated)

-0.451

Length

654 amino acids

Sequence
(BLAST)

001: MASVSDIKQV LEFLKNNGFS ESESALMEDI MEKSELASLD YETFLFPVIP PLPPLNLISN KNSASSSDEE FVSLPSSATD FCSSEFTNPY GIHTTAAPTS
101: QSSSDRLSQF GTARDYHDFD MQNDLFWYRE KDEDFPMPPY FGNSDGVGDP SEDKFVMSER HSAANWECKS PIDEGLKDYY HLDKQKHLEG KGQFSCSSPL
201: CACCKGPKGI YGEDIDINLT GTNYFQYEPT GETKTNYFIE TSCNTDWVGD IKGTRDFQPK AIEKDYHSYV HRDYEPKDDR LEALEGNEPD EAADDEGGAT
301: SDELLMFEGE NEFEVFNLRI IHRKNRTGFE ESKDLPIVLN SIIAGRYYVT EYLGSAAFSK VIQAHDMHTG VDVCLKIIKN DKDFFDQSLD EIKLLKFVNK
401: NDPCDEHHIL RLYDYFYHQE HLFIVCELLR ANLYEFQKYN RESDLEHYFT MSRLQTITRQ CLEALVFLHN LGIIHCDLKP ENILIKSYRR CEIKVIDLGS
501: SCFQSDSLSL YVQSRSYRAP EVILGLPYDA KIDLWSLGCI LGELCSGEVL FPNEAVVMLL ARVIGMLGPV DMDMLERGQE TQKYFTKDFD LYHINEDTSL
601: LEYIIPEEMS LEHQLSVSDP LFLDFVRKLL EINPQKRLTA KEALNHPWLS HWYE

Best Arabidopsis Sequence Match ( AT2G40120.1 )
(BLAST)

001: MAVDVKSVLE FLRRNGLTEA ESALRDDINE KNKLASFDFE KFLFPIPTPI KITASSRPSD SGGDGSNSKS SSSDDEFVSL DSSTSGFCSS SGFVNPYGDS
101: SSSSDGQSQF GTARTYPEWS EFYLHNETED EDEFMSPAFR ESDCFILPEN AEDKFITDNQ FENSLGVYDR SSSQGSLTEA SLDYLDKPFL LDIGLEDKTD
201: ELDLKTGDQL NVTDEEVDVV HEVEDEYEVF NLRIIHWKNR TGFEENKDLP IVINTVIGGR YYITEYIGSA AFSKVVQAQD LHNGVDVCLK IIKNDKDFFD
301: QSLDEIKLLK HVNKHDPADE HHILRLYDYF YHQEHLFIVC ELLRANLYEF QKFNQESGGE PYFNLSRLQV ITRQCLDALV FLHGLGIIHC DLKPENILIK
401: SYKRCAVKII DLGSSCFRSD NLCLYVQSRS YRAPEVILGL PYDEKIDLWS LGCILAELCS GEVLFPNEAV AMILARIVAV LGPIETEMLE KGQETHKYFT
501: KEYDLYHLNE ESNEIEYIIT EESSLEEQLQ VSDELFLDFV RTLLDINPLR RPTALEALNH PWLSSSSSYN

Arabidopsis Description

Hypothetical Ser-Thr protein kinase [Source:UniProtKB/TrEMBL;Acc:Q9XEE4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.