Factsheet for PGSC0003DMT400018439

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g074700.2.1	Tomato	nucleus	96.52	95.3
KRH22757	Soybean	nucleus	71.43	71.43
KRH26554	Soybean	nucleus	71.06	71.19
AT3G44850.1	Thale cress	nucleus	67.95	69.48
Bra020218.1-P	Field mustard	nucleus	65.2	67.81
CDY09171	Canola	nucleus	61.17	67.34
AT5G22840.1	Thale cress	nucleus	66.3	67.29
PGSC0003DMT400021639	Potato	nucleus	64.29	66.86
CDY26961	Canola	nucleus	65.75	66.85
CDX92332	Canola	nucleus	65.57	66.79
Bra002433.1-P	Field mustard	nucleus	65.57	66.79
PGSC0003DMT400006951	Potato	mitochondrion, nucleus	64.65	64.53
KRH25147	Soybean	mitochondrion	61.9	61.12
PGSC0003DMT400003820	Potato	cytosol	42.86	52.47
PGSC0003DMT400045066	Potato	cytosol	42.49	51.79
PGSC0003DMT400079686	Potato	cytosol	17.77	33.68
PGSC0003DMT400069308	Potato	golgi, vacuole	19.6	29.4
PGSC0003DMT400061423	Potato	nucleus	21.06	26.68
PGSC0003DMT400030615	Potato	nucleus	20.33	25.87
PGSC0003DMT400046853	Potato	cytosol	19.96	25.23
PGSC0003DMT400043636	Potato	cytosol	19.78	16.51
PGSC0003DMT400053226	Potato	mitochondrion	19.6	12.8
PGSC0003DMT400033770	Potato	mitochondrion	21.06	11.09
PGSC0003DMT400079685	Potato	nucleus	2.56	1.6
PGSC0003DMT400069307	Potato	nucleus	2.56	1.6
PGSC0003DMT400068117	Potato	nucleus	0.73	0.95

Protein Annotations

EntrezGene:102596093	MapMan:18.4.3.5	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M1AAM9	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400007154	PGSC:PGSC0003DMG400007154	EnsemblPlants:PGSC0003DMT400018439
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24055	PANTHER:PTHR24055:SF228	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029614FD	RefSeq:XP_006347217.1
SEG:seg	:	:	:	:	:

Description

Serine/arginine (SR) protein kinase protein [Source:PGSC_GENE;Acc:PGSC0003DMG400007154]

Coordinates

chr6:-:55224744..55229630

Molecular Weight (calculated)

61433.8 Da

IEP (calculated)

6.919

GRAVY (calculated)

-0.651

Length

546 amino acids

Sequence
(BLAST)

001: MAEEEERNGG DGSETSDYTS EDEGTEDYKR GGYHAVRIGD TFKLGRYVVQ SKLGWGHFST VWLAWDIQKS TYVALKVQKS AQHYTEAAMD EIAILKQVAE
101: GDPDDKKCVV KLLDHFKHSG LNGQHVCMVF EYLGDNLLTL IKYSDYRGLP IHKVKEICFH VLVGLDYLHR KLSIIHTDLK PENVLLLSMI DPAKDPTKSG
201: TPVILPSNKS KILSESGVSK AVKSLNGDLT KNQKKKIRKK AKRVAQKCAD KEASEETEPH NETIGPEDST CDEKPEANSV EEQTSIEASG DVSTKEGRQR
301: IQRHKRGSRS DRQKLLADVD LKCKLVDFGN ACWTYKQFTS DIQTRQYRCP EVILGAKYST SADLWSLACI CFELTTGDVL FDPHSGDNYD RDEDHLALMM
401: ELLGTMPRKI ALGGRHSREF FNRNGELRHI RRLRFWTLSK VLMEKYDLCE QDANEMADFL IPMLDFVPEK RPTAAQCLSH PWITGGPRHL TSSTNSLSEA
501: TENHGPKNNR EKDEREAMEV RVGNIAIDGA PGPVKASQSS NLAKKT

Best Arabidopsis Sequence Match ( AT3G44850.1 )
(BLAST)

001: MAEDKNNGRV NDESEYSSED EGTEDYKKGG YHTVRVGDTF KNGAYVIQSK LGWGHFSTVW LAWDTQESRY VALKVQKSAQ HYTEAAMDEI KILKQIAEGD
101: SGDKKCVVKL LDHFKHTGPN GKHVCMVFEY LGDNLLSVIK YSDYRGVPLH MVKELCFHIL VGLDYLHREL SIIHTDLKPE NVLLLSTIDP SRDVRRSGVP
201: LVLPITKDKI VSESAVKPET KSYTYNGDLT KNQKKKIRKK AKKVVAQDFG GEEALEESER DSNSEARING NSTVERSEGS STRLMEGEEA REKANKKNGR
301: GSRRGSRSTR QKLLSDIECK CKLVDFGNAC WTYKQFTSDI QTRQYRCPEV VLGSKYSTSA DMWSFACICF ELATGDVLFD PHSGENYDRD EDHLALMMEL
401: LGMMPRKIAL GGRYSRDFFN RQGELRHIRR LRFWPISKVL KEKYDFSEQD AKDMSDFLVT ILEFVPEKRP TAAQCLKHPW FNPGPRLLEP SLKPQQPKGE
501: EEGAANENIE KEKDEREAME AGVGNIAIDV SEPK

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FYC5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.