Factsheet for PGSC0003DMT400030615

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g013770.2.1	Tomato	nucleus	99.07	98.61
GSMUA_Achr11P...	Banana	cytosol	64.34	81.42
GSMUA_Achr8P28600_001	Banana	cytosol	39.86	79.17
VIT_01s0137g00580.t01	Wine grape	nucleus	79.02	78.47
PGSC0003DMT400046853	Potato	cytosol	74.59	74.07
Os12t0460800-03	Rice	cytosol	31.93	72.87
PGSC0003DMT400061423	Potato	nucleus	69.7	69.37
TraesCS6B01G238900.1	Wheat	cytosol	67.83	67.67
TraesCS6A01G210100.1	Wheat	cytosol	67.83	67.67
TraesCS6D01G193300.1	Wheat	cytosol	67.6	67.44
KXG35096	Sorghum	cytosol	66.43	67.22
TraesCS5D01G378900.2	Wheat	cytosol, mitochondrion	66.43	67.22
TraesCS5B01G371800.1	Wheat	cytosol	66.43	67.22
TraesCS5A01G369500.2	Wheat	cytosol	66.43	67.22
HORVU5Hr1G091970.12	Barley	cytosol, mitochondrion	66.43	67.22
GSMUA_Achr3P17160_001	Banana	cytosol	69.93	66.82
Zm00001d005361_P007	Maize	cytosol, plastid	64.34	65.4
KXG30551	Sorghum	cytosol	67.37	64.8
Zm00001d050970_P003	Maize	cytosol	66.9	64.35
Zm00001d017096_P005	Maize	cytosol	66.43	64.04
HORVU6Hr1G053760.52	Barley	cytosol	63.64	62.61
KXG37288	Sorghum	cytosol	53.38	59.79
PGSC0003DMT400079686	Potato	cytosol	22.84	34.03
PGSC0003DMT400069308	Potato	golgi, vacuole	24.71	29.12
PGSC0003DMT400003820	Potato	cytosol	25.87	24.89
PGSC0003DMT400045066	Potato	cytosol	25.41	24.33
PGSC0003DMT400021639	Potato	nucleus	26.81	21.9
PGSC0003DMT400006951	Potato	mitochondrion, nucleus	27.51	21.57
PGSC0003DMT400018439	Potato	nucleus	25.87	20.33
PGSC0003DMT400043636	Potato	cytosol	25.41	16.67
PGSC0003DMT400053226	Potato	mitochondrion	28.21	14.47
PGSC0003DMT400033770	Potato	mitochondrion	28.21	11.67
PGSC0003DMT400079685	Potato	nucleus	1.86	0.92
PGSC0003DMT400069307	Potato	nucleus	1.86	0.91
PGSC0003DMT400068117	Potato	nucleus	0.23	0.24

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1AUI5	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400011725	PGSC:PGSC0003DMG400011725
EnsemblPlants:PGSC0003DMT400030615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF55
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294C0D2

Description

PK12 protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400011725]

Coordinates

chr5:-:10676679..10681051

Molecular Weight (calculated)

50225.5 Da

IEP (calculated)

9.260

GRAVY (calculated)

-0.537

Length

429 amino acids

Sequence
(BLAST)

001: MDYVTEYPHS HMDRRPKKRP RLDWDPSHTP KAQSGIYYGQ EVGNSSSYVH SRLLPDHDNL YVKGLAQKGS PPRREDDKDG HYMFELGENL TTRYKILKKI
101: GEGTFGQVLE CWDREQKEFV AIKIIRSIKK YREAAMVEID VLQLLGRYDR GGSRCVQLRN WFDYRNHICL VFEKLGPSLF DFLRKNSYRA FPVDLVREIG
201: RQLLECVAFM HDMRLIHTDL KPENILFVSA DYIKVPDYKG TPWSHRDRSF YKRLPKSSVI KVIDFGSTAY ERPDHNYIVS TRHYRAPEVI LGLGWSYPCD
301: LWSVGCILVE LCSGEALFQT HENLEHLAMM ERVLGPLPSQ MLNKVDRHAE KYVRRGRLDW PEGATSRESI KSVIKLPRLQ NLVMQHVDHS AGDLIDLLQG
401: LLRFDPSIRM TARDALRHPF FTRDQFRRL

Best Arabidopsis Sequence Match ( AT4G24740.1 )
(BLAST)

001: MEMERVHEFP HTHMDRRPRK RARLGWDVLP QATKAQVGMF CGQEIGNISS FASSGAPSDN SSSLCVKGVA RNGSPPWRED DKDGHYIFEL GDDLTPRYKI
101: YSKMGEGTFG QVLECWDRER KEMVAVKIVR GVKKYREAAM IEIEMLQQLG KHDKGGNRCV QIRNWFDYRN HICIVFEKLG SSLYDFLRKN NYRSFPIDLV
201: REIGWQLLEC VAFMHDLRMI HTDLKPENIL LVSSDYVKIP EYKGSRLQRD VCYKRVPKSS AIKVIDFGST TYERQDQTYI VSTRHYRAPE VILGLGWSYP
301: CDVWSVGCII VELCTGEALF QTHENLEHLA MMERVLGPFP QQMLKKVDRH SEKYVRRGRL DWPDGATSRD SLKAVLKLPR LQNLIMQHVD HSAGELINMV
401: QGLLRFDPSE RITAREALRH PFFARRR

Arabidopsis Description

AFC2At4g24740 [Source:UniProtKB/TrEMBL;Acc:Q1EBU3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.