Factsheet for VIT_01s0137g00580.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	65.51	83.48
VIT_17s0000g09500.t01	Wine grape	nucleus	82.87	82.3
PGSC0003DMT400030615	Potato	nucleus	78.47	79.02
Solyc05g013770.2.1	Tomato	nucleus	78.47	78.65
GSMUA_Achr8P28600_001	Banana	cytosol	38.89	77.78
Os12t0460800-03	Rice	cytosol	33.8	77.66
VIT_08s0040g02640.t01	Wine grape	nucleus	72.22	72.73
TraesCS6B01G238900.1	Wheat	cytosol	70.83	71.16
TraesCS6A01G210100.1	Wheat	cytosol	70.6	70.93
TraesCS6D01G193300.1	Wheat	cytosol	70.6	70.93
KXG35096	Sorghum	cytosol	68.29	69.58
HORVU5Hr1G091970.12	Barley	cytosol, mitochondrion	67.36	68.63
TraesCS5A01G369500.2	Wheat	cytosol	67.36	68.63
TraesCS5B01G371800.1	Wheat	cytosol	67.36	68.63
TraesCS5D01G378900.2	Wheat	cytosol, mitochondrion	67.36	68.63
KXG30551	Sorghum	cytosol	70.83	68.61
Zm00001d005361_P007	Maize	cytosol, plastid	66.44	68.01
Zm00001d050970_P003	Maize	cytosol	70.14	67.94
Zm00001d017096_P005	Maize	cytosol	69.44	67.42
GSMUA_Achr3P17160_001	Banana	cytosol	69.44	66.82
HORVU6Hr1G053760.52	Barley	cytosol	66.2	65.6
VIT_04s0008g04220.t01	Wine grape	nucleus	59.72	64.18
KXG37288	Sorghum	cytosol	54.17	61.1
VIT_07s0031g02130.t01	Wine grape	cytosol	26.16	25.45
VIT_06s0061g01050.t01	Wine grape	nucleus	26.16	20.62
VIT_08s0007g04220.t01	Wine grape	nucleus	26.16	20.29
VIT_13s0067g00960.t01	Wine grape	cytosol	27.08	16.07
VIT_16s0039g00610.t01	Wine grape	plasma membrane, vacuole	26.39	12.54
VIT_01s0011g03350.t01	Wine grape	nucleus	25.69	10.18
VIT_01s0011g01590.t01	Wine grape	mitochondrion	27.08	6.46

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100268099	wikigene:100268099	MapMan:18.4.3.2	Gene3D:3.30.200.20	ProteinID:CBI16809
ProteinID:CBI16809.3	UniProt:D7SMD0	EMBL:FN594954	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100268099	wikigene:LOC100268099	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF55	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001982B82	ArrayExpress:VIT_01s0137g00580	EnsemblPlantsGene:VIT_01s0137g00580
EnsemblPlants:VIT_01s0137g00580.t01	unigene:Vvi.2050	RefSeq:XP_002285476	RefSeq:XP_002285476.1	:	:

Description

No Description!

Coordinates

chr1:+:7066115..7070213

Molecular Weight (calculated)

49930.4 Da

IEP (calculated)

8.585

GRAVY (calculated)

-0.417

Length

432 amino acids

Sequence
(BLAST)

001: MEMECVTEFP HTHMDRRPRK RPRFAWDAPQ LHPKAQPGIY CGQEVGNVTS HGTSRVLSDQ ASIFVKGLAQ KGSPPWRDDD KDGHFMFALG ENLTSRYKIH
101: RKIGEGTFGQ VLECWDRETK EMVAIKVVRG IKKYREAAMI EVEVLQLLGK YDKSGSRCGQ IRNWFDYRNH ICIVFEMLGP SLYDFLRKNN YRSFPVDLVR
201: EIGRQLLECV AFMHDLHLIH TDLKPENILF VSPEYVKVSD YKVTTRSPKD GICYKKLPRS SAIKVIDFGS TAFECQDHSY IVSTRHYRAP EVILGLGWSY
301: PCDMWSVGCI LVELCSGEAL FQTHENLEHL AMMERVLGPI PPHMLKRVDR HAEKYVRKGR LDWPEGAISR ESIKAVMKLP RLPNLVMQHV DHSAGDLIDL
401: LQGLLRYDPS NRLTAQDALR HPFFTRDYHS RF

Best Arabidopsis Sequence Match ( AT4G24740.1 )
(BLAST)

001: MEMERVHEFP HTHMDRRPRK RARLGWDVLP QATKAQVGMF CGQEIGNISS FASSGAPSDN SSSLCVKGVA RNGSPPWRED DKDGHYIFEL GDDLTPRYKI
101: YSKMGEGTFG QVLECWDRER KEMVAVKIVR GVKKYREAAM IEIEMLQQLG KHDKGGNRCV QIRNWFDYRN HICIVFEKLG SSLYDFLRKN NYRSFPIDLV
201: REIGWQLLEC VAFMHDLRMI HTDLKPENIL LVSSDYVKIP EYKGSRLQRD VCYKRVPKSS AIKVIDFGST TYERQDQTYI VSTRHYRAPE VILGLGWSYP
301: CDVWSVGCII VELCTGEALF QTHENLEHLA MMERVLGPFP QQMLKKVDRH SEKYVRRGRL DWPDGATSRD SLKAVLKLPR LQNLIMQHVD HSAGELINMV
401: QGLLRFDPSE RITAREALRH PFFARRR

Arabidopsis Description

AFC2At4g24740 [Source:UniProtKB/TrEMBL;Acc:Q1EBU3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.