Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0610600-01 | |
| Os02t0789400-01 | |
| Os06t0187900-02 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G24740.1 | Os02t0610600-01 | AT4G31580.1 | 10593939 |
| AT4G24740.1 | Os02t0789400-01 | AT4G31580.1 | 10593939 |
| AT4G24740.1 | Os06t0187900-02 | AT4G31580.1 | 10593939 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P28600_001 | Banana | cytosol | 78.72 | 68.52 |
| TraesCS6B01G238900.1 | Wheat | cytosol | 90.96 | 39.77 |
| TraesCS6A01G210100.1 | Wheat | cytosol | 90.43 | 39.53 |
| TraesCS6D01G193300.1 | Wheat | cytosol | 90.43 | 39.53 |
| Solyc03g112050.2.1 | Tomato | cytosol | 79.26 | 38.4 |
| HORVU6Hr1G053760.52 | Barley | cytosol | 86.7 | 37.39 |
| Zm00001d050970_P003 | Maize | cytosol | 87.23 | 36.77 |
| KXG30551 | Sorghum | cytosol | 87.23 | 36.77 |
| Zm00001d017096_P005 | Maize | cytosol | 85.64 | 36.18 |
| VIT_17s0000g09500.t01 | Wine grape | nucleus | 81.38 | 35.17 |
| PGSC0003DMT400046853 | Potato | cytosol | 80.32 | 34.95 |
| KRH54290 | Soybean | cytosol, nucleus | 78.19 | 34.59 |
| KRH63654 | Soybean | nucleus | 78.19 | 34.59 |
| KRH57157 | Soybean | cytosol | 78.72 | 34.42 |
| VIT_01s0137g00580.t01 | Wine grape | nucleus | 77.66 | 33.8 |
| AT4G24740.1 | Thale cress | nucleus | 75.53 | 33.26 |
| Os01t0837900-01 | Rice | nucleus | 76.6 | 33.18 |
| PGSC0003DMT400030615 | Potato | nucleus | 72.87 | 31.93 |
| Solyc05g013770.2.1 | Tomato | nucleus | 72.87 | 31.79 |
| KRH03872 | Soybean | nucleus | 79.79 | 31.78 |
| Os01t0590900-01 | Rice | nucleus | 63.3 | 30.67 |
| GSMUA_Achr3P17160_001 | Banana | cytosol | 72.87 | 30.51 |
| KXG37288 | Sorghum | cytosol | 61.7 | 30.29 |
| Os12t0640800-01 | Rice | mitochondrion | 29.26 | 24.23 |
| CDY03422 | Canola | plastid | 75.53 | 19.53 |
| CDY34307 | Canola | plastid | 75.0 | 19.39 |
| Bra013829.1-P | Field mustard | nucleus | 67.55 | 17.74 |
| Os09t0552300-01 | Rice | cytosol | 28.72 | 12.83 |
| Os07t0472400-01 | Rice | plasma membrane | 28.72 | 9.94 |
| Os05t0466900-01 | Rice | cytosol, nucleus | 31.91 | 9.92 |
| Os03t0719500-02 | Rice | cytosol, nucleus | 31.91 | 8.93 |
| Os01t0832900-01 | Rice | nucleus | 31.38 | 8.09 |
| Os03t0748400-01 | Rice | nucleus | 16.49 | 7.58 |
| Os04t0602800-01 | Rice | nucleus | 29.79 | 6.06 |
| Os02t0702500-01 | Rice | cytosol, nucleus, plastid | 27.13 | 5.43 |
| Os03t0710100-01 | Rice | nucleus | 14.89 | 3.53 |
| CDY03423 | Canola | cytosol, peroxisome, plastid | 3.19 | 1.92 |
| Bra013830.1-P | Field mustard | plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.3.2 | UniProt:A0A0P0Y9T6 | ProteinID:BAT17053.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006139 |
| GO:GO:0006397 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046777 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| EnsemblPlantsGene:Os12g0460800 | EnsemblPlants:Os12t0460800-03 | PFAM:PF00069 | PFscan:PS50011 | PANTHER:PTHR24058 | PANTHER:PTHR24058:SF52 |
| InterPro:Prot_kinase_dom | SMART:SM00220 | SUPFAM:SSF56112 | UniParc:UPI0003938BE2 | : | : |
Description
serine/threonin-protein kinase AFC2LAMMER kinase-type protein, Positive regulator of disease resistance (Os12t0460800-01);Similar to Lammer-type protein kinase. (Os12t0460800-02);Similar to Lammer-type protein kinase. (Os12t0460800-03)
Coordinates
chr12:-:16196141..16197247
Molecular Weight (calculated)
21653.0 Da
IEP (calculated)
8.719
GRAVY (calculated)
-0.520
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: SRSPKEGSYF KQLPKSSAIK VIDFGSTTYD QQDQTYVVST RHYRAPEVIL GLGWSYPCDI WSVGCILVEL CTGEALFQTH ENLEHLAMME RVFGPLPCHM
101: LKRADRHSEK YVRKGRLNWP EGCASRDSMK AVMKLPRLQN LVMQNVDHSG GEFIDLLQGL LRYDPASRLT AQEALRHPFL REQSERRR
101: LKRADRHSEK YVRKGRLNWP EGCASRDSMK AVMKLPRLQN LVMQNVDHSG GEFIDLLQGL LRYDPASRLT AQEALRHPFL REQSERRR
001: MTKVAIVMHD LRMIHTDLKP ENILLVSSDY VKIPEYKGSR LQRDVCYKRV PKSSAIKVID FGSTTYERQD QTYIVSTRHY RAPEVILGLG WSYPCDVWSV
101: GCIIVELCTG EALFQTHENL EHLAMMERVL GPFPQQMLKK VDRHSEKYVR RGRLDWPDGA TSRDSLKAVL KLPRLQNLIM QHVDHSAGEL INMVQGLLRF
201: DPSERITARE ALRHPFFARR R
101: GCIIVELCTG EALFQTHENL EHLAMMERVL GPFPQQMLKK VDRHSEKYVR RGRLDWPDGA TSRDSLKAVL KLPRLQNLIM QHVDHSAGEL INMVQGLLRF
201: DPSERITARE ALRHPFFARR R
Arabidopsis Description
AFC2At4g24740 [Source:UniProtKB/TrEMBL;Acc:Q1EBU3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.