Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G24740.1 | CDX72313 | AT4G31580.1 | 10593939 |
| AT4G24740.1 | CDY13444 | AT4G31580.1 | 10593939 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013829.1-P | Field mustard | nucleus | 96.81 | 42.32 |
| Os12t0460800-03 | Rice | cytosol | 1.92 | 3.19 |
| GSMUA_Achr8P28600_001 | Banana | cytosol | 1.6 | 2.31 |
| CDY07581 | Canola | nucleus | 5.75 | 2.15 |
| Solyc03g112050.2.1 | Tomato | cytosol | 2.56 | 2.06 |
| PGSC0003DMT400046853 | Potato | cytosol | 2.56 | 1.85 |
| Zm00001d050970_P003 | Maize | cytosol | 2.56 | 1.79 |
| CDX75268 | Canola | nucleus | 2.24 | 1.76 |
| AT4G24740.1 | Thale cress | nucleus | 2.24 | 1.64 |
| CDY52749 | Canola | nucleus | 4.15 | 1.6 |
| Zm00001d017096_P005 | Maize | cytosol | 2.24 | 1.57 |
| KXG30551 | Sorghum | cytosol | 2.24 | 1.57 |
| KXG37288 | Sorghum | cytosol | 1.92 | 1.57 |
| CDX78188 | Canola | cytosol | 2.24 | 1.54 |
| CDX73543 | Canola | nucleus | 2.24 | 1.52 |
| CDX68873 | Canola | nucleus | 1.92 | 1.5 |
| GSMUA_Achr11P... | Banana | cytosol | 1.6 | 1.47 |
| CDX76200 | Canola | endoplasmic reticulum, plasma membrane, plastid | 0.64 | 1.46 |
| KRH54290 | Soybean | cytosol, nucleus | 1.92 | 1.41 |
| KRH63654 | Soybean | nucleus | 1.92 | 1.41 |
| TraesCS6D01G193300.1 | Wheat | cytosol | 1.92 | 1.4 |
| TraesCS6B01G238900.1 | Wheat | cytosol | 1.92 | 1.4 |
| TraesCS6A01G210100.1 | Wheat | cytosol | 1.92 | 1.4 |
| KRH57157 | Soybean | cytosol | 1.92 | 1.4 |
| VIT_17s0000g09500.t01 | Wine grape | nucleus | 1.92 | 1.38 |
| HORVU6Hr1G053760.52 | Barley | cytosol | 1.92 | 1.38 |
| GSMUA_Achr3P17160_001 | Banana | cytosol | 1.92 | 1.34 |
| KRH03872 | Soybean | nucleus | 1.92 | 1.27 |
| Zm00001d005361_P007 | Maize | cytosol, plastid | 1.6 | 1.18 |
| HORVU5Hr1G091970.12 | Barley | cytosol, mitochondrion | 1.6 | 1.18 |
| KXG35096 | Sorghum | cytosol | 1.6 | 1.18 |
| TraesCS5A01G369500.2 | Wheat | cytosol | 1.6 | 1.18 |
| TraesCS5B01G371800.1 | Wheat | cytosol | 1.6 | 1.18 |
| TraesCS5D01G378900.2 | Wheat | cytosol, mitochondrion | 1.6 | 1.18 |
| CDY34307 | Canola | plastid | 2.56 | 1.1 |
| CDY03422 | Canola | plastid | 2.56 | 1.1 |
| CDX78145 | Canola | nucleus | 1.6 | 0.91 |
| CDY09171 | Canola | nucleus | 1.28 | 0.81 |
| CDX73580 | Canola | nucleus | 1.6 | 0.79 |
| CDX92332 | Canola | nucleus | 1.28 | 0.75 |
| CDY26961 | Canola | nucleus | 1.28 | 0.74 |
| CDY50618 | Canola | cytosol | 0.96 | 0.7 |
| CDX93215 | Canola | cytosol | 1.28 | 0.7 |
| CDY07061 | Canola | cytosol | 1.28 | 0.7 |
| CDY24345 | Canola | cytosol | 0.96 | 0.69 |
| CDY65761 | Canola | nucleus | 1.28 | 0.68 |
| CDX72542 | Canola | nucleus | 0.96 | 0.68 |
| CDX74804 | Canola | cytosol | 1.28 | 0.68 |
| CDY40627 | Canola | nucleus | 0.96 | 0.68 |
| CDX69144 | Canola | nucleus | 0.96 | 0.68 |
| CDX75507 | Canola | nucleus | 0.96 | 0.68 |
| CDY06452 | Canola | plasma membrane | 0.96 | 0.56 |
| CDY13591 | Canola | nucleus | 1.28 | 0.45 |
| CDX83561 | Canola | nucleus | 1.28 | 0.44 |
| CDX74622 | Canola | nucleus | 1.28 | 0.44 |
| CDY37643 | Canola | nucleus | 1.28 | 0.44 |
| CDY38548 | Canola | nucleus | 1.28 | 0.43 |
| CDX92157 | Canola | nucleus | 1.28 | 0.39 |
| CDX95825 | Canola | nucleus | 1.28 | 0.38 |
| CDX72990 | Canola | nucleus | 1.28 | 0.38 |
| CDX96477 | Canola | nucleus | 1.28 | 0.37 |
| CDY11106 | Canola | nucleus | 1.28 | 0.35 |
| CDX68227 | Canola | nucleus | 1.28 | 0.34 |
| CDY04183 | Canola | cytosol, nucleus, plasma membrane | 0.96 | 0.23 |
| CDY39184 | Canola | nucleus | 0.96 | 0.22 |
| CDY07839 | Canola | mitochondrion | 0.0 | 0.0 |
| Bra013830.1-P | Field mustard | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY03423 | EnsemblPlantsGene:GSBRNA2T00116072001 | Gene3D:3.60.21.10 | GO:A0A078EV10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | InterPro:Calcineurin-like_PHP_ApaH | InterPro:IPR029052 | InterPro:Metallo-depent_PP-like | PANTHER:PTHR16509 | PANTHER:PTHR16509:SF2 |
| PFAM:PF00149 | ProteinID:CDY03423 | ProteinID:CDY03423.1 | SEG:seg | SUPFAM:SSF56300 | UniParc:UPI0004EE7769 |
| MapMan:50.3.6 | : | : | : | : | : |
Description
BnaC01g16590D
Coordinates
chrLK031943:+:378712..380237
Molecular Weight (calculated)
35034.5 Da
IEP (calculated)
5.365
GRAVY (calculated)
-0.282
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSVTTQPLF SFGVIADVQY ADIPDGRSFL GTPRYYRNSI LVLQKAVQAW NQHGNLKFVI NMGDIVDGFC PKDQSLSATK KLVDEFEKFQ GPVYHMIGNH
101: CLYNLPRREL LPLLNIPSRD DDYNAYYDFS PTPEYRVVVL DGYDISAVGW PEDHPKTLAA LKILDEKNPN SEKNSPEGLV GVERRFVKYN GGVGEKQLEW
201: LDGVLKDATE SNQRVIVCGH VPMSPGCASS AALLWNFDEV MSVIHKYDVV KVCLSGHDHK GGYFVDSRGV HHRSLEAALE CPPGTYSFGY VDVYENKLSL
301: VGTDRMLSTD FEI
101: CLYNLPRREL LPLLNIPSRD DDYNAYYDFS PTPEYRVVVL DGYDISAVGW PEDHPKTLAA LKILDEKNPN SEKNSPEGLV GVERRFVKYN GGVGEKQLEW
201: LDGVLKDATE SNQRVIVCGH VPMSPGCASS AALLWNFDEV MSVIHKYDVV KVCLSGHDHK GGYFVDSRGV HHRSLEAALE CPPGTYSFGY VDVYENKLSL
301: VGTDRMLSTD FEI
001: MGSAARQPLF SFGVIADVQY ADISDGRSFL GVPRYYRNSI LVLQRAVETW NQHGNLKFVI NMGDIVDGFC PKDQSLAATK KLVHEFEKFN GPVYHMIGNH
101: CLYNLPREEL LPLLKIPGRD GNAYYDFSPT PEYRVVVLDG YDISAVGWPQ EHPNTIAALK ILEEKNPNTD KNSPAGLEDV ARRFVKYNGG VGEKQLQWLD
201: SVLQDASNSN QRVIVCGHVP MSPGVASKAA LLWNFDEVMN IIHKYDSVKV CLSGHDHKGG YFVDSHGVHH RSLEAALECP PGTYSFGYID VYDNKLSLVG
301: TDRMQSTDFE N
101: CLYNLPREEL LPLLKIPGRD GNAYYDFSPT PEYRVVVLDG YDISAVGWPQ EHPNTIAALK ILEEKNPNTD KNSPAGLEDV ARRFVKYNGG VGEKQLQWLD
201: SVLQDASNSN QRVIVCGHVP MSPGVASKAA LLWNFDEVMN IIHKYDSVKV CLSGHDHKGG YFVDSHGVHH RSLEAALECP PGTYSFGYID VYDNKLSLVG
301: TDRMQSTDFE N
Arabidopsis Description
Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase [Source:UniProtKB/Swiss-Prot;Acc:Q9SB68]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.