Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78145 | Canola | nucleus | 81.55 | 94.52 |
| AT3G53030.1 | Thale cress | nucleus | 69.87 | 83.74 |
| GSMUA_Achr8P26710_001 | Banana | cytosol | 50.47 | 72.23 |
| HORVU7Hr1G058230.1 | Barley | cytosol | 11.99 | 68.47 |
| GSMUA_Achr8P04590_001 | Banana | nucleus | 51.42 | 68.2 |
| KRH32624 | Soybean | nucleus | 58.83 | 68.19 |
| VIT_08s0007g04220.t01 | Wine grape | nucleus | 59.46 | 67.68 |
| HORVU4Hr1G018630.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 19.4 | 67.21 |
| KRH20002 | Soybean | nucleus | 54.57 | 66.67 |
| PGSC0003DMT400021639 | Potato | nucleus | 55.2 | 66.67 |
| PGSC0003DMT400006951 | Potato | mitochondrion, nucleus | 57.1 | 66.18 |
| HORVU3Hr1G049750.1 | Barley | mitochondrion | 18.93 | 65.57 |
| HORVU6Hr1G019910.4 | Barley | cytosol | 16.4 | 65.41 |
| Solyc10g085720.1.1 | Tomato | nucleus | 53.94 | 65.39 |
| Solyc09g008790.2.1 | Tomato | cytosol | 57.1 | 65.34 |
| CDY09171 | Canola | nucleus | 50.0 | 63.91 |
| CDX92332 | Canola | nucleus | 53.63 | 63.43 |
| CDY26961 | Canola | nucleus | 53.63 | 63.31 |
| Os03t0748400-01 | Rice | nucleus | 40.06 | 62.1 |
| Zm00001d013273_P003 | Maize | nucleus | 53.79 | 60.46 |
| HORVU1Hr1G034750.1 | Barley | cytosol | 15.14 | 60.38 |
| EER93458 | Sorghum | nucleus | 53.79 | 60.14 |
| TraesCS5D01G397000.1 | Wheat | nucleus | 53.0 | 59.79 |
| TraesCS5B01G392200.1 | Wheat | nucleus | 53.0 | 59.79 |
| TraesCS5A01G387100.1 | Wheat | nucleus | 52.84 | 59.61 |
| HORVU5Hr1G094810.3 | Barley | nucleus | 52.37 | 59.18 |
| HORVU2Hr1G091920.1 | Barley | cytosol | 27.29 | 57.1 |
| HORVU7Hr1G090500.1 | Barley | cytosol | 25.87 | 55.41 |
| HORVU1Hr1G094650.1 | Barley | nucleus | 25.55 | 55.1 |
| HORVU4Hr1G059640.3 | Barley | golgi, mitochondrion, plasma membrane | 31.23 | 54.85 |
| CDY50618 | Canola | cytosol | 36.91 | 54.67 |
| CDX72542 | Canola | nucleus | 37.85 | 54.55 |
| CDY24345 | Canola | cytosol | 37.54 | 54.46 |
| CDY40627 | Canola | nucleus | 37.85 | 54.42 |
| HORVU3Hr1G021690.1 | Barley | cytosol | 21.14 | 54.03 |
| CDX69144 | Canola | nucleus | 37.54 | 53.97 |
| CDX75507 | Canola | nucleus | 37.54 | 53.6 |
| HORVU3Hr1G021740.1 | Barley | cytosol | 21.45 | 53.12 |
| Zm00001d034010_P002 | Maize | mitochondrion, nucleus | 52.84 | 52.92 |
| HORVU1Hr1G082710.1 | Barley | nucleus, plastid | 34.23 | 51.54 |
| HORVU2Hr1G066530.1 | Barley | nucleus | 32.81 | 51.49 |
| CDY07839 | Canola | mitochondrion | 22.71 | 49.15 |
| HORVU5Hr1G046420.1 | Barley | nucleus | 20.03 | 48.85 |
| HORVU6Hr1G081350.5 | Barley | nucleus | 27.6 | 48.48 |
| HORVU7Hr1G121360.1 | Barley | cytosol, mitochondrion, nucleus | 24.76 | 47.29 |
| CDX75268 | Canola | nucleus | 18.14 | 28.89 |
| CDX68873 | Canola | nucleus | 18.14 | 28.82 |
| CDX78188 | Canola | cytosol | 19.4 | 27.03 |
| CDX73543 | Canola | nucleus | 19.56 | 26.9 |
| CDX76200 | Canola | endoplasmic reticulum, plasma membrane, plastid | 5.52 | 25.55 |
| CDY06452 | Canola | plasma membrane | 18.3 | 21.85 |
| CDX93215 | Canola | cytosol | 16.4 | 18.15 |
| CDY07061 | Canola | cytosol | 16.4 | 18.12 |
| CDX74804 | Canola | cytosol | 16.56 | 17.89 |
| CDY65761 | Canola | nucleus | 16.4 | 17.75 |
| CDY03422 | Canola | plastid | 18.77 | 16.37 |
| CDY34307 | Canola | plastid | 18.61 | 16.23 |
| CDY52749 | Canola | nucleus | 20.66 | 16.13 |
| CDY07581 | Canola | nucleus | 21.14 | 15.97 |
| CDX74622 | Canola | nucleus | 20.35 | 14.27 |
| CDY37643 | Canola | nucleus | 20.35 | 14.14 |
| CDY38548 | Canola | nucleus | 19.87 | 13.42 |
| CDY13591 | Canola | nucleus | 17.98 | 12.87 |
| CDX83561 | Canola | nucleus | 17.98 | 12.64 |
| CDX72990 | Canola | nucleus | 18.14 | 10.83 |
| CDX96477 | Canola | nucleus | 18.14 | 10.67 |
| CDX92157 | Canola | nucleus | 17.19 | 10.67 |
| CDX95825 | Canola | nucleus | 17.19 | 10.4 |
| CDY11106 | Canola | nucleus | 17.98 | 9.97 |
| CDX68227 | Canola | nucleus | 18.14 | 9.66 |
| CDY04183 | Canola | cytosol, nucleus, plasma membrane | 17.82 | 8.55 |
| CDY39184 | Canola | nucleus | 17.51 | 8.12 |
| CDY03423 | Canola | cytosol, peroxisome, plastid | 0.79 | 1.6 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:18.4.3.5 | Gene3D:3.30.200.20 | GO:A0A078C9Z0 | EnsemblPlants:CDX73580 | ProteinID:CDX73580 |
| ProteinID:CDX73580.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00109131001 | InterPro:IPR000719 | InterPro:IPR036388 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24055 |
| PANTHER:PTHR24055:SF228 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF46785 | SUPFAM:SSF56112 |
| InterPro:Ser/Thr_kinase_AS | UniParc:UPI0004EDB296 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : |
Description
BnaC08g24230D
Coordinates
chrLK031799:-:1420514..1424333
Molecular Weight (calculated)
71469.4 Da
IEP (calculated)
8.236
GRAVY (calculated)
-0.467
Length
634 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAEKWSSDG GEYTSEDEGT EDYRRGGYHA VRIGDSFKNG RYVVQSKLGW GHFSTVWLSW DTLSSRYVAL KVQKSAQHYT EAAMDEITIL QQIAEGDADD
101: TKCVVKLLDH FKHSGPNGQH VCMVFEYLGD NLLTLIKYSD YRGLPIPMVK EICYHMLVGL DYLHKELSII HTDLKPENVL LVSRIDPSKD PRKSGAPLII
201: ASGKEKIVDS NGDFVKNHKK DVHRKVKRSV NGKLSAAAEE DCPSTSNGCE EGEQGGKKGS RSSRRHLVES ADLKCKLVDF GNACWTYKQF TSDIQTRQYR
301: CPEVILGSKY STSADLWSFA CICFELATGD VLFDPHSGDN YDRDEDHLAL MMELLGMMPR KIALGGRYSR DLFNRHGDLR HIRRLRFWPM NKVLTEKYEF
401: SEQDANELSD FLVSILDFVP EKRPTAAQCL LHPWINSVPR SLEPSLSPQD QNPEEKLDTE RKKREKEEQE AMVVKMGNVA ISSPKSKPVR ELKEKNKTRL
501: GNMISVPVSL NAAVRLGIAD AIWNSGANSP LSVSEILPRL LVPSRESPAY TCILRTVPAL TYGHIGNCPW CIGPNKILVK YSNRRRKNAC YRLQWSLLRS
601: LRPPTPSGGI DASFASYVPH RTHICISLIS VLTS
101: TKCVVKLLDH FKHSGPNGQH VCMVFEYLGD NLLTLIKYSD YRGLPIPMVK EICYHMLVGL DYLHKELSII HTDLKPENVL LVSRIDPSKD PRKSGAPLII
201: ASGKEKIVDS NGDFVKNHKK DVHRKVKRSV NGKLSAAAEE DCPSTSNGCE EGEQGGKKGS RSSRRHLVES ADLKCKLVDF GNACWTYKQF TSDIQTRQYR
301: CPEVILGSKY STSADLWSFA CICFELATGD VLFDPHSGDN YDRDEDHLAL MMELLGMMPR KIALGGRYSR DLFNRHGDLR HIRRLRFWPM NKVLTEKYEF
401: SEQDANELSD FLVSILDFVP EKRPTAAQCL LHPWINSVPR SLEPSLSPQD QNPEEKLDTE RKKREKEEQE AMVVKMGNVA ISSPKSKPVR ELKEKNKTRL
501: GNMISVPVSL NAAVRLGIAD AIWNSGANSP LSVSEILPRL LVPSRESPAY TCILRTVPAL TYGHIGNCPW CIGPNKILVK YSNRRRKNAC YRLQWSLLRS
601: LRPPTPSGGI DASFASYVPH RTHICISLIS VLTS
001: MEAEKWNSDG GEYTSEDEGT EDYRRGGYHA VRIGDSFKTG RYVVQSKLGW GHFSTVWLSW DTQSSRYVAL KVQKSAQHYT EAAMDEITIL QQIAEGDTDD
101: TKCVVKLLDH FKHSGPNGQH VCMVFEYLGD NLLTLIKYSD YRGLPIPMVK EICYHMLVGL DYLHKQLSII HTDLKPENVL LPSTIDPSKD PRKSGAPLVL
201: PTDKDNTVVD SNGDFVKNQK TGSHRKAKLS AQGHAENKGN TESDKVRGVG SPVNGKQCAA EKSVEEDCPS TSDAIELDGS EKGKQGGKKG SRSSRRHLVA
301: SADLKCKLVD FGNACWTYKQ FTSDIQTRQY RCPEVILGSK YSTSADLWSF ACICFELVTG DVLFDPHSGD NYDRDEDHLA LMMELLGMMP RKIALGGRYS
401: RDFFNRHGDL RHIRRLRFWP MNKVLTEKYE FSEQDANDLS DFLVSILDFV PEKRPTAAQC LLHPWINSGP RSIKPSLKDE NSDKLDTEKN KRENEEQEAV
501: EVKMGNVVIS SLDSKPGMSQ SSSTLKLAI
101: TKCVVKLLDH FKHSGPNGQH VCMVFEYLGD NLLTLIKYSD YRGLPIPMVK EICYHMLVGL DYLHKQLSII HTDLKPENVL LPSTIDPSKD PRKSGAPLVL
201: PTDKDNTVVD SNGDFVKNQK TGSHRKAKLS AQGHAENKGN TESDKVRGVG SPVNGKQCAA EKSVEEDCPS TSDAIELDGS EKGKQGGKKG SRSSRRHLVA
301: SADLKCKLVD FGNACWTYKQ FTSDIQTRQY RCPEVILGSK YSTSADLWSF ACICFELVTG DVLFDPHSGD NYDRDEDHLA LMMELLGMMP RKIALGGRYS
401: RDFFNRHGDL RHIRRLRFWP MNKVLTEKYE FSEQDANDLS DFLVSILDFV PEKRPTAAQC LLHPWINSGP RSIKPSLKDE NSDKLDTEKN KRENEEQEAV
501: EVKMGNVVIS SLDSKPGMSQ SSSTLKLAI
Arabidopsis Description
SRPK4Ser/arg-rich protein kinase 4 [Source:UniProtKB/TrEMBL;Acc:F4J982]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.