Factsheet for Solyc10g085720.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

nucleus: 25464976

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400021639	Potato	nucleus	94.84	94.48
Solyc09g008790.2.1	Tomato	cytosol	76.86	72.56
GSMUA_Achr8P26710_001	Banana	cytosol	59.46	70.2
VIT_08s0007g04220.t01	Wine grape	nucleus	72.08	67.68
KRH20002	Soybean	nucleus	66.35	66.86
KRH32624	Soybean	nucleus	69.79	66.73
GSMUA_Achr8P04590_001	Banana	nucleus	60.8	66.53
HORVU7Hr1G058230.1	Barley	cytosol	13.96	65.77
HORVU4Hr1G018630.1	Barley	cytosol, mitochondrion, nucleus, plastid	22.94	65.57
AT3G53030.1	Thale cress	nucleus	65.77	65.03
HORVU3Hr1G049750.1	Barley	mitochondrion	22.56	64.48
Solyc06g074700.2.1	Tomato	nucleus	66.35	62.75
HORVU6Hr1G019910.4	Barley	cytosol	18.93	62.26
CDX78145	Canola	nucleus	65.01	62.16
Os03t0748400-01	Rice	nucleus	48.37	61.86
Solyc11g066650.1.1	Tomato	nucleus	68.07	61.49
HORVU1Hr1G034750.1	Barley	cytosol	18.36	60.38
Zm00001d013273_P003	Maize	nucleus	64.63	59.93
EER93458	Sorghum	nucleus	64.63	59.61
TraesCS5B01G392200.1	Wheat	nucleus	64.05	59.61
TraesCS5A01G387100.1	Wheat	nucleus	64.05	59.61
TraesCS5D01G397000.1	Wheat	nucleus	63.86	59.43
HORVU5Hr1G094810.3	Barley	nucleus	63.29	59.0
HORVU3Hr1G021690.1	Barley	cytosol	26.77	56.45
HORVU2Hr1G091920.1	Barley	cytosol	32.5	56.11
HORVU1Hr1G094650.1	Barley	nucleus	31.36	55.78
Bra006970.1-P	Field mustard	nucleus	65.39	55.43
HORVU7Hr1G090500.1	Barley	cytosol	31.36	55.41
Solyc02g082550.2.1	Tomato	cytosol	46.85	54.93
CDX73580	Canola	nucleus	65.39	53.94
HORVU4Hr1G059640.3	Barley	golgi, mitochondrion, plasma membrane	37.09	53.74
HORVU3Hr1G021740.1	Barley	cytosol	26.2	53.52
Zm00001d034010_P002	Maize	mitochondrion, nucleus	63.86	52.76
HORVU2Hr1G066530.1	Barley	nucleus	39.58	51.24
HORVU1Hr1G082710.1	Barley	nucleus, plastid	40.92	50.83
HORVU5Hr1G046420.1	Barley	nucleus	24.86	50.0
HORVU6Hr1G081350.5	Barley	nucleus	33.08	47.92
HORVU7Hr1G121360.1	Barley	cytosol, mitochondrion, nucleus	30.4	47.89
Solyc05g013770.2.1	Tomato	nucleus	22.37	27.15
Solyc03g112050.2.1	Tomato	cytosol	17.97	24.23
Solyc06g051510.2.1	Tomato	cytosol	20.84	21.0
Solyc03g097350.2.1	Tomato	plastid	23.52	12.96
Solyc05g009540.2.1	Tomato	nucleus	23.52	12.24
Solyc03g098150.2.1	Tomato	nucleus	21.22	9.53
Solyc06g072340.2.1	Tomato	nucleus	20.84	9.0

Protein Annotations

MapMan:18.4.3.5	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0000245	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	GO:GO:0050684	InterPro:IPR000719
UniProt:K4D406	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24055	PANTHER:PTHR24055:SF228	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc10g085720.1	EnsemblPlants:Solyc10g085720.1.1	UniParc:UPI000276AA37	SEG:seg	:

Description

No Description!

Coordinates

chr10:+:64807702..64811702

Molecular Weight (calculated)

59332.5 Da

IEP (calculated)

6.827

GRAVY (calculated)

-0.555

Length

523 amino acids

Sequence
(BLAST)

001: MEGFVEDQRL KEEEEMIEES SDDCTSEDEG IDDYRRGGYH AVRIGDTFKG GRYVVQSKLG WGHFSTVWLA WDTLMSQFVA LKVQKSAQHY TEAALDEITI
101: LKQIAEGDPE GRKSVVKLLD HFKHSGPNGQ HVCMVFEYLG DNLLSLIKYT DYRGLPIHMV KELCFHVLVG LDYLHRQLSI IHTDLKPENM LLCSTIDPYK
201: DPRKSGAPLI LPSNVDKASL KSGTVKGRVT FYANLTNDQK KVRRKPKETA QIAGNTAVES SQSNTDLSND HLAGYANVDR LSNSDAATAS GKESLGPKRG
301: SGSRRRKTLE SVDLKCKLVD FGNACWTYKQ FTDNIQTRQY RCPEVILGSK YSTSADLWSF ACICFELATG DVLFDPHSGD NFDRDEDHLA LMMELLGTMP
401: RKIALGGRYS REFFNRHGDL RHIRRLRFWP LDKVLVEKYE FSERDAKDMA DFLIPILDFD PEKRPTAAQC LLHPWMNAGP NNLEPRVPDA RSKATDTVNS
501: EQIKRDKEKK EAMEVRMGKM SIV

Best Arabidopsis Sequence Match ( AT3G53030.1 )
(BLAST)

001: MEAEKWNSDG GEYTSEDEGT EDYRRGGYHA VRIGDSFKTG RYVVQSKLGW GHFSTVWLSW DTQSSRYVAL KVQKSAQHYT EAAMDEITIL QQIAEGDTDD
101: TKCVVKLLDH FKHSGPNGQH VCMVFEYLGD NLLTLIKYSD YRGLPIPMVK EICYHMLVGL DYLHKQLSII HTDLKPENVL LPSTIDPSKD PRKSGAPLVL
201: PTDKDNTVVD SNGDFVKNQK TGSHRKAKLS AQGHAENKGN TESDKVRGVG SPVNGKQCAA EKSVEEDCPS TSDAIELDGS EKGKQGGKKG SRSSRRHLVA
301: SADLKCKLVD FGNACWTYKQ FTSDIQTRQY RCPEVILGSK YSTSADLWSF ACICFELVTG DVLFDPHSGD NYDRDEDHLA LMMELLGMMP RKIALGGRYS
401: RDFFNRHGDL RHIRRLRFWP MNKVLTEKYE FSEQDANDLS DFLVSILDFV PEKRPTAAQC LLHPWINSGP RSIKPSLKDE NSDKLDTEKN KRENEEQEAV
501: EVKMGNVVIS SLDSKPGMSQ SSSTLKLAI

Arabidopsis Description

SRPK4Ser/arg-rich protein kinase 4 [Source:UniProtKB/TrEMBL;Acc:F4J982]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.