Factsheet for Solyc09g008790.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400006951	Potato	mitochondrion, nucleus	94.95	96.16
Solyc10g085720.1.1	Tomato	nucleus	72.56	76.86
GSMUA_Achr8P26710_001	Banana	cytosol	56.86	71.11
KRH20002	Soybean	nucleus	65.7	70.13
KRH32624	Soybean	nucleus	69.13	70.02
VIT_08s0007g04220.t01	Wine grape	nucleus	70.22	69.84
AT3G53030.1	Thale cress	nucleus	65.7	68.81
GSMUA_Achr8P04590_001	Banana	nucleus	58.12	67.36
HORVU7Hr1G058230.1	Barley	cytosol	13.36	66.67
HORVU4Hr1G018630.1	Barley	cytosol, mitochondrion, nucleus, plastid	21.84	66.12
CDX78145	Canola	nucleus	65.16	66.0
Os03t0748400-01	Rice	nucleus	47.29	64.06
Solyc06g074700.2.1	Tomato	nucleus	63.9	64.01
HORVU3Hr1G049750.1	Barley	mitochondrion	21.12	63.93
Solyc11g066650.1.1	Tomato	nucleus	66.79	63.9
HORVU6Hr1G019910.4	Barley	cytosol	17.69	61.64
EER93458	Sorghum	nucleus	62.64	61.2
Zm00001d013273_P003	Maize	nucleus	61.55	60.46
HORVU1Hr1G034750.1	Barley	cytosol	17.33	60.38
TraesCS5A01G387100.1	Wheat	nucleus	61.19	60.32
TraesCS5B01G392200.1	Wheat	nucleus	61.01	60.14
TraesCS5D01G397000.1	Wheat	nucleus	61.01	60.14
HORVU5Hr1G094810.3	Barley	nucleus	60.29	59.54
Bra006970.1-P	Field mustard	nucleus	65.16	58.51
CDX73580	Canola	nucleus	65.34	57.1
HORVU2Hr1G091920.1	Barley	cytosol	30.87	56.44
HORVU1Hr1G094650.1	Barley	nucleus	29.78	56.12
HORVU7Hr1G090500.1	Barley	cytosol	29.96	56.08
Solyc02g082550.2.1	Tomato	cytosol	44.95	55.83
HORVU3Hr1G021690.1	Barley	cytosol	24.91	55.65
Zm00001d034010_P002	Maize	mitochondrion, nucleus	61.73	54.03
HORVU4Hr1G059640.3	Barley	golgi, mitochondrion, plasma membrane	35.2	54.02
HORVU3Hr1G021740.1	Barley	cytosol	24.91	53.91
HORVU2Hr1G066530.1	Barley	nucleus	37.55	51.49
HORVU5Hr1G046420.1	Barley	nucleus	23.83	50.77
HORVU1Hr1G082710.1	Barley	nucleus, plastid	38.45	50.59
HORVU6Hr1G081350.5	Barley	nucleus	31.77	48.75
HORVU7Hr1G121360.1	Barley	cytosol, mitochondrion, nucleus	28.7	47.89
Solyc05g013770.2.1	Tomato	nucleus	21.12	27.15
Solyc03g112050.2.1	Tomato	cytosol	17.51	25.0
Solyc06g051510.2.1	Tomato	cytosol	19.86	21.19
Solyc03g097350.2.1	Tomato	plastid	22.2	12.96
Solyc05g009540.2.1	Tomato	nucleus	21.3	11.74
Solyc03g098150.2.1	Tomato	nucleus	20.58	9.79
Solyc06g072340.2.1	Tomato	nucleus	19.86	9.08

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.5	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0000245	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016043	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	GO:GO:0050684
InterPro:IPR000719	UniProt:K4CQR4	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24055	PANTHER:PTHR24055:SF228	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc09g008790.2	EnsemblPlants:Solyc09g008790.2.1	UniParc:UPI000276C0F4	SEG:seg

Description

No Description!

Coordinates

chr9:-:2214074..2219739

Molecular Weight (calculated)

62252.8 Da

IEP (calculated)

7.090

GRAVY (calculated)

-0.501

Length

554 amino acids

Sequence
(BLAST)

001: MEGFNQERRV NAAAAEVVEE VEVEESSDDC SSEDEGTDDY RRGGYHAVRI GDSFNGGRYV VQSKLGWGHF STVWLAWDTL LSRFVALKVQ KSAQHYTEAA
101: MDEITILKQI AECDQDDKKC VVKLLDNFKH SGPNGQHVCM VFEYLGDNLL TLLKYTDYHG LPIHMVKELC YHVLVGLDYL HRQLSIIHTD LKPENVLLCS
201: TIDPSKDPRK SGTPLILSSH KDITTLDGGS VKGYVTSNGN LTKNHNKKIR RKAKQAAQCF VGKESSLGTK GGQDSSASAE SSVSAKSNSD MLNSSNRMSN
301: ADTAKGSGKE YEGPKRGSRS TRRKLLEAVD LKCKVVDFGS ACWTYKQFTD DIQTRQYRCP EVILGSKYST SADLWSFACI CFELATGDVL FDPHSGDNFD
401: RDEDHLALMM ELIGMMPRKI ALGGRYSRDL FNRHGDLRHI RRLRFWPLKK VLVEKYEFSE QDAKDLSDFL VPILDFVPEK RPTAAQCLLH SWINAGPRLL
501: ELSLPDAQSK AVDALNSDQT KKQNEEEREV MEVGIGKIAI SKNIKNFRSY SVKF

Best Arabidopsis Sequence Match ( AT3G53030.1 )
(BLAST)

001: MEAEKWNSDG GEYTSEDEGT EDYRRGGYHA VRIGDSFKTG RYVVQSKLGW GHFSTVWLSW DTQSSRYVAL KVQKSAQHYT EAAMDEITIL QQIAEGDTDD
101: TKCVVKLLDH FKHSGPNGQH VCMVFEYLGD NLLTLIKYSD YRGLPIPMVK EICYHMLVGL DYLHKQLSII HTDLKPENVL LPSTIDPSKD PRKSGAPLVL
201: PTDKDNTVVD SNGDFVKNQK TGSHRKAKLS AQGHAENKGN TESDKVRGVG SPVNGKQCAA EKSVEEDCPS TSDAIELDGS EKGKQGGKKG SRSSRRHLVA
301: SADLKCKLVD FGNACWTYKQ FTSDIQTRQY RCPEVILGSK YSTSADLWSF ACICFELVTG DVLFDPHSGD NYDRDEDHLA LMMELLGMMP RKIALGGRYS
401: RDFFNRHGDL RHIRRLRFWP MNKVLTEKYE FSEQDANDLS DFLVSILDFV PEKRPTAAQC LLHPWINSGP RSIKPSLKDE NSDKLDTEKN KRENEEQEAV
501: EVKMGNVVIS SLDSKPGMSQ SSSTLKLAI

Arabidopsis Description

SRPK4Ser/arg-rich protein kinase 4 [Source:UniProtKB/TrEMBL;Acc:F4J982]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.