Factsheet for AT3G53030.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78145	Canola	nucleus	83.36	80.62
GSMUA_Achr8P26710_001	Banana	cytosol	59.74	71.33
Bra006970.1-P	Field mustard	nucleus	83.18	71.31
CDX73580	Canola	nucleus	83.74	69.87
KRH32624	Soybean	nucleus	71.46	69.1
VIT_08s0007g04220.t01	Wine grape	nucleus	72.02	68.4
HORVU4Hr1G018630.1	Barley	cytosol, mitochondrion, nucleus, plastid	23.63	68.31
KRH20002	Soybean	nucleus	66.54	67.82
GSMUA_Achr8P04590_001	Banana	nucleus	61.25	67.78
HORVU7Hr1G058230.1	Barley	cytosol	14.18	67.57
PGSC0003DMT400021639	Potato	nucleus	66.35	66.86
HORVU3Hr1G049750.1	Barley	mitochondrion	23.06	66.67
PGSC0003DMT400006951	Potato	mitochondrion, nucleus	68.81	66.54
AT3G44850.1	Thale cress	nucleus	66.54	65.92
Solyc10g085720.1.1	Tomato	nucleus	65.03	65.77
Solyc09g008790.2.1	Tomato	cytosol	68.81	65.7
HORVU6Hr1G019910.4	Barley	cytosol	19.47	64.78
AT5G22840.1	Thale cress	nucleus	64.08	63.01
Os03t0748400-01	Rice	nucleus	48.2	62.35
HORVU1Hr1G034750.1	Barley	cytosol	18.71	62.26
EER93458	Sorghum	nucleus	64.84	60.49
Zm00001d013273_P003	Maize	nucleus	64.27	60.28
TraesCS5D01G397000.1	Wheat	nucleus	63.33	59.61
TraesCS5B01G392200.1	Wheat	nucleus	63.33	59.61
TraesCS5A01G387100.1	Wheat	nucleus	63.33	59.61
HORVU5Hr1G094810.3	Barley	nucleus	62.95	59.36
HORVU2Hr1G091920.1	Barley	cytosol	33.08	57.76
HORVU1Hr1G094650.1	Barley	nucleus	31.57	56.8
HORVU7Hr1G090500.1	Barley	cytosol	31.57	56.42
HORVU4Hr1G059640.3	Barley	golgi, mitochondrion, plasma membrane	38.0	55.68
HORVU3Hr1G021690.1	Barley	cytosol	26.09	55.65
HORVU3Hr1G021740.1	Barley	cytosol	26.65	55.08
AT2G17530.1	Thale cress	cytosol	44.42	53.41
AT4G35500.2	Thale cress	cytosol	44.23	53.3
Zm00001d034010_P002	Maize	mitochondrion, nucleus	63.52	53.08
HORVU1Hr1G082710.1	Barley	nucleus, plastid	41.4	52.02
HORVU2Hr1G066530.1	Barley	nucleus	39.7	51.98
HORVU5Hr1G046420.1	Barley	nucleus	24.76	50.38
HORVU6Hr1G081350.5	Barley	nucleus	33.65	49.31
HORVU7Hr1G121360.1	Barley	cytosol, mitochondrion, nucleus	30.62	48.8
AT4G32660.1	Thale cress	nucleus	21.36	28.25
AT4G24740.1	Thale cress	nucleus	21.55	26.7
AT3G53570.1	Thale cress	cytosol	22.68	25.7
AT2G40120.1	Thale cress	cytosol	19.66	18.25
AT3G53640.1	Thale cress	cytosol	19.66	16.2
AT5G35980.1	Thale cress	nucleus	23.82	13.18
AT1G13350.3	Thale cress	nucleus	19.09	12.11
AT3G25840.1	Thale cress	nucleus	20.98	11.87
AT1G73450.1	Thale cress	nucleus	21.36	9.81
AT1G73460.2	Thale cress	nucleus	21.36	9.67
AT3G17750.1	Thale cress	nucleus	20.79	9.67

Protein Annotations

MapMan:18.4.3.5	Gene3D:3.30.200.20	EntrezGene:824469	ProteinID:AEE79027.1	ArrayExpress:AT3G53030	EnsemblPlantsGene:AT3G53030
RefSeq:AT3G53030	TAIR:AT3G53030	RefSeq:AT3G53030-TAIR-G	EnsemblPlants:AT3G53030.1	TAIR:AT3G53030.1	Unigene:At.9863
ncoils:Coil	UniProt:F4J982	GO:GO:0000166	GO:GO:0000245	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006464	GO:GO:0006468
GO:GO:0006950	GO:GO:0006979	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016043	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	GO:GO:0050684	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	RefSeq:NP_566977.1	PFAM:PF00069
PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24055	PANTHER:PTHR24055:SF228
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	Symbol:SRPK4	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0000163708	SEG:seg	:	:	:	:

Description

SRPK4Ser/arg-rich protein kinase 4 [Source:UniProtKB/TrEMBL;Acc:F4J982]

Coordinates

chr3:+:19662195..19664553

Molecular Weight (calculated)

59397.0 Da

IEP (calculated)

6.465

GRAVY (calculated)

-0.626

Length

529 amino acids

Sequence
(BLAST)

001: MEAEKWNSDG GEYTSEDEGT EDYRRGGYHA VRIGDSFKTG RYVVQSKLGW GHFSTVWLSW DTQSSRYVAL KVQKSAQHYT EAAMDEITIL QQIAEGDTDD
101: TKCVVKLLDH FKHSGPNGQH VCMVFEYLGD NLLTLIKYSD YRGLPIPMVK EICYHMLVGL DYLHKQLSII HTDLKPENVL LPSTIDPSKD PRKSGAPLVL
201: PTDKDNTVVD SNGDFVKNQK TGSHRKAKLS AQGHAENKGN TESDKVRGVG SPVNGKQCAA EKSVEEDCPS TSDAIELDGS EKGKQGGKKG SRSSRRHLVA
301: SADLKCKLVD FGNACWTYKQ FTSDIQTRQY RCPEVILGSK YSTSADLWSF ACICFELVTG DVLFDPHSGD NYDRDEDHLA LMMELLGMMP RKIALGGRYS
401: RDFFNRHGDL RHIRRLRFWP MNKVLTEKYE FSEQDANDLS DFLVSILDFV PEKRPTAAQC LLHPWINSGP RSIKPSLKDE NSDKLDTEKN KRENEEQEAV
501: EVKMGNVVIS SLDSKPGMSQ SSSTLKLAI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.