Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68873 | Canola | nucleus | 91.75 | 91.98 |
| CDX75268 | Canola | nucleus | 91.0 | 91.46 |
| Bra011368.1-P | Field mustard | nucleus | 91.0 | 91.46 |
| VIT_04s0008g04220.t01 | Wine grape | nucleus | 73.5 | 73.13 |
| Os01t0590900-01 | Rice | nucleus | 70.0 | 72.16 |
| KRH61991 | Soybean | cytosol | 58.25 | 71.25 |
| EES00987 | Sorghum | mitochondrion | 68.25 | 70.73 |
| TraesCS3D01G214800.2 | Wheat | cytosol | 68.5 | 70.62 |
| TraesCS3B01G242600.2 | Wheat | cytosol | 68.5 | 70.62 |
| KRH52649 | Soybean | nucleus | 71.0 | 70.47 |
| TraesCS3A01G212200.2 | Wheat | cytosol | 68.25 | 70.36 |
| HORVU3Hr1G051340.19 | Barley | golgi, plasma membrane, plastid | 68.75 | 65.48 |
| Zm00001d044338_P003 | Maize | mitochondrion | 63.5 | 64.8 |
| GSMUA_Achr8P04030_001 | Banana | mitochondrion | 70.25 | 61.09 |
| KRG94066 | Soybean | cytosol | 19.75 | 59.85 |
| AT4G24740.1 | Thale cress | nucleus | 60.25 | 56.44 |
| AT3G53570.1 | Thale cress | cytosol | 63.75 | 54.6 |
| Zm00001d011258_P001 | Maize | cytosol, nucleus, plasma membrane | 53.0 | 53.54 |
| AT2G17530.1 | Thale cress | cytosol | 27.75 | 25.23 |
| AT4G35500.2 | Thale cress | cytosol | 26.0 | 23.69 |
| AT3G53030.1 | Thale cress | nucleus | 28.25 | 21.36 |
| AT3G44850.1 | Thale cress | nucleus | 28.0 | 20.97 |
| AT5G22840.1 | Thale cress | nucleus | 27.75 | 20.63 |
| AT2G40120.1 | Thale cress | cytosol | 26.75 | 18.77 |
| AT3G53640.1 | Thale cress | cytosol | 30.0 | 18.69 |
| AT1G13350.3 | Thale cress | nucleus | 30.25 | 14.51 |
| AT3G25840.1 | Thale cress | nucleus | 29.5 | 12.62 |
| AT5G35980.1 | Thale cress | nucleus | 27.5 | 11.51 |
| AT1G73450.1 | Thale cress | nucleus | 29.5 | 10.24 |
| AT1G73460.2 | Thale cress | nucleus | 29.5 | 10.09 |
| AT3G17750.1 | Thale cress | nucleus | 28.25 | 9.93 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.3.2 | Gene3D:3.30.200.20 | EntrezGene:829401 | UniProt:A1L4Y9 | ProteinID:AEE86099.1 |
| ProteinID:AEE86100.1 | ProteinID:AEE86101.1 | Symbol:AME3 | ProteinID:ANM66144.1 | ArrayExpress:AT4G32660 | EnsemblPlantsGene:AT4G32660 |
| RefSeq:AT4G32660 | TAIR:AT4G32660 | RefSeq:AT4G32660-TAIR-G | EnsemblPlants:AT4G32660.1 | TAIR:AT4G32660.1 | Unigene:At.21547 |
| EMBL:BT029776 | ProteinID:CAA18595.1 | ProteinID:CAB79983.1 | EMBL:D45355 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0004712 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046777 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| RefSeq:NP_001031774.1 | RefSeq:NP_001328058.1 | RefSeq:NP_194992.1 | RefSeq:NP_974666.1 | ProteinID:OAO98283.1 | UniProt:P51568 |
| PFAM:PF00069 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00108 |
| PFscan:PS50011 | PANTHER:PTHR24058 | PANTHER:PTHR24058:SF52 | InterPro:Prot_kinase_dom | SMART:SM00220 | SUPFAM:SSF56112 |
| InterPro:Ser/Thr_kinase_AS | EMBL:U16178 | UniParc:UPI0000125661 | : | : | : |
Description
AFC3At4g32660 [Source:UniProtKB/TrEMBL;Acc:A1L4Y9]
Coordinates
chr4:+:15756018..15759314
Molecular Weight (calculated)
46226.7 Da
IEP (calculated)
9.181
GRAVY (calculated)
-0.499
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MIANGFESMD KERVRKRPRM TWDEAPAEPE AKRAVIKGHG SDGRILSPPL RDDDRDGHYV FSLRDNLTPR YKILSKMGEG TFGRVLECWD RDTKEYVAIK
101: IIRSIKKYRD AAMIEIDVLQ KLVKSDKGRT RCVQMKNWFD YRNHICIVFE KLGPSLFDFL KRNKYSAFPL ALVRDFGCQL LESVAYMHEL QLVHTDLKPE
201: NILLVSSENV KLPDNKRSAA NETHFRCLPK SSAIKLIDFG STVCDNRIHH SIVQTRHYRS PEVILGLGWS YQCDLWSIGC ILFELCTGEA LFQTHDNLEH
301: LAMMERALGP LPEHMTRKAS RGAEKYFRRG CRLNWPEGAN SRESIRAVKR LDRLKDMVSK HVDNTRSRFA DLLYGLLAYD PSERLTANEA LDHPFFKSSS
101: IIRSIKKYRD AAMIEIDVLQ KLVKSDKGRT RCVQMKNWFD YRNHICIVFE KLGPSLFDFL KRNKYSAFPL ALVRDFGCQL LESVAYMHEL QLVHTDLKPE
201: NILLVSSENV KLPDNKRSAA NETHFRCLPK SSAIKLIDFG STVCDNRIHH SIVQTRHYRS PEVILGLGWS YQCDLWSIGC ILFELCTGEA LFQTHDNLEH
301: LAMMERALGP LPEHMTRKAS RGAEKYFRRG CRLNWPEGAN SRESIRAVKR LDRLKDMVSK HVDNTRSRFA DLLYGLLAYD PSERLTANEA LDHPFFKSSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.