Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007012.1-P | Field mustard | cytosol | 90.58 | 95.92 |
| CDX78188 | Canola | cytosol | 92.72 | 95.16 |
| CDX73543 | Canola | nucleus | 93.79 | 95.01 |
| VIT_08s0040g02640.t01 | Wine grape | nucleus | 76.87 | 83.68 |
| KRH67569 | Soybean | nucleus | 75.16 | 79.05 |
| PGSC0003DMT400061423 | Potato | nucleus | 72.59 | 78.65 |
| KXG33666 | Sorghum | cytosol | 71.95 | 77.42 |
| Os01t0837900-01 | Rice | nucleus | 71.73 | 77.19 |
| TraesCS6A01G241200.1 | Wheat | cytosol | 71.31 | 76.73 |
| HORVU6Hr1G061750.11 | Barley | nucleus | 71.09 | 76.32 |
| TraesCS6D01G223400.1 | Wheat | nucleus | 70.66 | 76.04 |
| GSMUA_Achr9P03190_001 | Banana | nucleus | 70.88 | 75.92 |
| GSMUA_Achr5P29170_001 | Banana | nucleus | 70.88 | 75.92 |
| CDX76200 | Canola | endoplasmic reticulum, plasma membrane, plastid | 22.27 | 75.91 |
| TraesCS6B01G283400.1 | Wheat | nucleus | 70.45 | 75.81 |
| Zm00001d042938_P003 | Maize | cytosol | 71.09 | 74.11 |
| KRG95853 | Soybean | cytosol | 44.75 | 72.82 |
| AT4G24740.1 | Thale cress | nucleus | 63.6 | 69.56 |
| AT4G32660.1 | Thale cress | nucleus | 54.6 | 63.75 |
| CDY52749 | Canola | nucleus | 91.22 | 52.46 |
| CDY07581 | Canola | nucleus | 90.79 | 50.54 |
| AT2G17530.1 | Thale cress | cytosol | 23.34 | 24.77 |
| AT4G35500.2 | Thale cress | cytosol | 22.7 | 24.15 |
| AT3G53030.1 | Thale cress | nucleus | 25.7 | 22.68 |
| AT3G44850.1 | Thale cress | nucleus | 25.05 | 21.91 |
| AT5G22840.1 | Thale cress | nucleus | 23.98 | 20.82 |
| AT2G40120.1 | Thale cress | cytosol | 23.98 | 19.65 |
| AT3G53640.1 | Thale cress | cytosol | 25.7 | 18.69 |
| AT1G13350.3 | Thale cress | nucleus | 25.7 | 14.39 |
| AT3G25840.1 | Thale cress | nucleus | 24.84 | 12.41 |
| AT5G35980.1 | Thale cress | nucleus | 25.05 | 12.24 |
| AT1G73450.1 | Thale cress | nucleus | 25.05 | 10.16 |
| AT3G17750.1 | Thale cress | nucleus | 24.41 | 10.02 |
| AT1G73460.2 | Thale cress | nucleus | 25.05 | 10.01 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.3.2 | Gene3D:3.30.200.20 | EntrezGene:824525 | ProteinID:AEE79110.1 | ProteinID:AEE79111.1 |
| ProteinID:AEE79112.1 | Symbol:AFC1 | EMBL:AK317353 | ArrayExpress:AT3G53570 | EnsemblPlantsGene:AT3G53570 | RefSeq:AT3G53570 |
| TAIR:AT3G53570 | RefSeq:AT3G53570-TAIR-G | EnsemblPlants:AT3G53570.1 | TAIR:AT3G53570.1 | Unigene:At.277 | UniProt:B9DH08 |
| ProteinID:CAB67664.1 | EMBL:D45354 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0004674 | GO:GO:0004712 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | RefSeq:NP_001030853.1 | RefSeq:NP_190925.1 | RefSeq:NP_850695.2 | UniProt:P51566 | PFAM:PF00069 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24058 | PANTHER:PTHR24058:SF44 |
| InterPro:Prot_kinase_dom | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | EMBL:U16176 | UniParc:UPI000012565F |
| SEG:seg | : | : | : | : | : |
Description
AFC1AT3G53570 protein [Source:UniProtKB/TrEMBL;Acc:B9DH08]
Coordinates
chr3:-:19861177..19864526
Molecular Weight (calculated)
54201.3 Da
IEP (calculated)
9.340
GRAVY (calculated)
-0.457
Length
467 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSSVYRDKA SSIAMILETQ RNVEFPHRIV DKRPRKRPRL TWDAAPPLLP PPPPPTVFQP PLYYGPEFAS GLVPNFVYPN MFYNGLPRQG SPPWRPDDKD
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.