CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07581	Canola	nucleus	96.18	93.09
CDX73543	Canola	nucleus	52.59	92.62
CDX78188	Canola	cytosol	51.85	92.53
AT3G53570.1	Thale cress	cytosol	52.46	91.22
VIT_08s0040g02640.t01	Wine grape	nucleus	42.86	81.12
KRH67569	Soybean	nucleus	41.87	76.58
PGSC0003DMT400061423	Potato	nucleus	40.39	76.1
Os01t0837900-01	Rice	nucleus	40.39	75.58
KXG33666	Sorghum	cytosol	40.39	75.58
CDX76200	Canola	endoplasmic reticulum, plasma membrane, plastid	12.68	75.18
TraesCS6A01G241200.1	Wheat	cytosol	39.78	74.42
HORVU6Hr1G061750.11	Barley	nucleus	39.66	74.02
TraesCS6D01G223400.1	Wheat	nucleus	39.53	73.96
GSMUA_Achr5P29170_001	Banana	nucleus	39.66	73.85
GSMUA_Achr9P03190_001	Banana	nucleus	39.53	73.62
TraesCS6B01G283400.1	Wheat	nucleus	39.29	73.5
KRG95853	Soybean	cytosol	25.62	72.47
Zm00001d042938_P003	Maize	cytosol	39.9	72.32
CDX68873	Canola	nucleus	30.3	61.65
CDX75268	Canola	nucleus	30.17	61.56
CDY34307	Canola	plastid	37.19	41.54
CDY03422	Canola	plastid	37.07	41.4
CDY50618	Canola	cytosol	13.55	25.7
CDY24345	Canola	cytosol	13.67	25.4
CDX69144	Canola	nucleus	13.79	25.4
CDX75507	Canola	nucleus	13.79	25.23
CDY40627	Canola	nucleus	13.67	25.17
CDX72542	Canola	nucleus	13.55	25.0
CDY07839	Canola	mitochondrion	8.99	24.91
CDX78145	Canola	nucleus	15.89	23.58
CDY09171	Canola	nucleus	13.79	22.58
CDY26961	Canola	nucleus	14.53	21.97
CDX92332	Canola	nucleus	14.41	21.83
CDY06452	Canola	plasma membrane	13.92	21.28
CDX73580	Canola	nucleus	16.13	20.66
CDX93215	Canola	cytosol	13.67	19.37
CDY07061	Canola	cytosol	13.67	19.34
CDX74804	Canola	cytosol	13.42	18.57
CDY65761	Canola	nucleus	13.18	18.26
CDX74622	Canola	nucleus	16.38	14.71
CDY37643	Canola	nucleus	16.26	14.47
CDY38548	Canola	nucleus	16.01	13.84
CDY13591	Canola	nucleus	13.42	12.3
CDX83561	Canola	nucleus	13.18	11.86
CDX92157	Canola	nucleus	13.79	10.96
CDX72990	Canola	nucleus	14.04	10.73
CDX95825	Canola	nucleus	13.79	10.69
CDX96477	Canola	nucleus	14.04	10.58
CDY11106	Canola	nucleus	13.92	9.88
CDX68227	Canola	nucleus	14.04	9.58
CDY04183	Canola	cytosol, nucleus, plasma membrane	14.41	8.85
CDY39184	Canola	nucleus	13.79	8.19
CDY03423	Canola	cytosol, peroxisome, plastid	1.6	4.15

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	MapMan:18.4.3.2	Gene3D:3.30.200.20	GO:A0A078ITJ4	UniProt:A0A078ITJ4
EnsemblPlants:CDY52749	ProteinID:CDY52749	ProteinID:CDY52749.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00007692001	InterPro:IPR000719	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50293	PANTHER:PTHR24058
PANTHER:PTHR24058:SF44	InterPro:Prot_kinase_dom	SMART:SM00028	SMART:SM00220	SUPFAM:SSF48452	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0004EF392F	SEG:seg

Description

BnaA07g37640DBnaA07g37640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ITJ4]

Coordinates

chrLK033124:+:15379..19770

Molecular Weight (calculated)

93416.7 Da

IEP (calculated)

8.695

GRAVY (calculated)

-0.434

Length

812 amino acids

Sequence
(BLAST)

001: MQSSVHREKA SSIAMILETR RNVEFPHRNV DKRPRKRPRL AWDAPPPLPP PSSVFHPPLY YGPEFASGVV PSFGYPNMFF NGLPRQGSPP WRPDDKDGHF
101: SFVVGDTLTP RYQILSKMGE GTFGQVLECF DDKHKEAVAI KVIRSVPKYR EAAMIEIDVL QRLSRHDVGG SRCVQIRNWF DYRNHICIVF EKLGPSLYDF
201: LRKNSYRSFP IDLVRELGRQ LLESVAYMHD LRLIHTDLKP ENILLVSSEY IKIPDYKFLS RPTRDGSYFK NLPKSSAIKL IDFGSTTLEH QDHNHIVSTR
301: HYRAPEVILG VGWNYPCDLW SIGCILVELC SGEALFQTHE NLEHLAMMER VLGPLPPHMV LRADRRSDRY FRRGAKLDWP EGATSRDSLK AVWKLPRLPN
401: LIMQHVDHSA GDLIDLLLGL LRYDPTERLK AREALNHPFF TRSREQKMKR KSERHVPCLL SFCGCLKRVI TVTLGFEGTR FISIMESLGR LQPFHLSFPK
501: HPSFPPFRPL IRPNSSFKHT PIKASSSKSQ NPITPLHKST PFRLFKSTCI TLTTAAALLF VNLRLKPPAI AAPVAPPPST ESKEHMTLEE EERALEEHLA
601: THPPDVDSLR SLMEVKIRSR KLTEAVEVVD RLIKLEPEEP EWPVLKANIF TYSGEIDSAT ASFEEILAKD PLRVEAYHGL VMAYSDAGLD LKDVESRIED
701: AMLRCKEENN HNDFRDFKLL LAQIRVIEGK HSEALKLYRE LVKEEPGDFR PYLCQGVIYT LLKKKDKAEE QFDKFRELVP ENHPYREYFM DNLIASKLFS
801: EKTQREMAGS ES

Best Arabidopsis Sequence Match ( AT3G53570.1 )
(BLAST)

001: MQSSVYRDKA SSIAMILETQ RNVEFPHRIV DKRPRKRPRL TWDAAPPLLP PPPPPTVFQP PLYYGPEFAS GLVPNFVYPN MFYNGLPRQG SPPWRPDDKD
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN

Arabidopsis Description

AFC1AT3G53570 protein [Source:UniProtKB/TrEMBL;Acc:B9DH08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.