Factsheet for Zm00001d042938_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33666	Sorghum	cytosol	94.2	97.23
Os01t0837900-01	Rice	nucleus	91.74	94.7
TraesCS6A01G241200.1	Wheat	cytosol	89.51	92.4
TraesCS6D01G223400.1	Wheat	nucleus	89.29	92.17
HORVU6Hr1G061750.11	Barley	nucleus	89.29	91.95
TraesCS6B01G283400.1	Wheat	nucleus	89.06	91.94
VIT_08s0040g02640.t01	Wine grape	nucleus	77.46	80.89
GSMUA_Achr5P29170_001	Banana	nucleus	78.57	80.73
GSMUA_Achr9P03190_001	Banana	nucleus	77.01	79.13
PGSC0003DMT400061423	Potato	nucleus	75.45	78.42
KRH67569	Soybean	nucleus	75.45	76.13
Bra007012.1-P	Field mustard	cytosol	72.99	74.15
CDX78188	Canola	cytosol	72.99	71.87
CDX73543	Canola	nucleus	73.88	71.8
KRG95853	Soybean	cytosol	45.98	71.78
AT3G53570.1	Thale cress	cytosol	74.11	71.09
CDX76200	Canola	endoplasmic reticulum, plasma membrane, plastid	20.76	67.88
Zm00001d017096_P005	Maize	cytosol	66.29	66.74
Zm00001d050970_P003	Maize	cytosol	65.4	65.7
Zm00001d005361_P007	Maize	cytosol, plastid	61.83	65.64
Zm00001d044338_P003	Maize	mitochondrion	55.13	63.01
Zm00001d011258_P001	Maize	cytosol, nucleus, plasma membrane	47.77	54.04
CDY52749	Canola	nucleus	72.32	39.9
CDY07581	Canola	nucleus	71.88	38.38
Zm00001d006308_P001	Maize	plastid	24.55	25.94
Zm00001d013273_P003	Maize	nucleus	25.67	20.39
Zm00001d034010_P002	Maize	mitochondrion, nucleus	25.89	18.33
Zm00001d010578_P003	Maize	cytosol, plastid	24.55	15.56
Zm00001d021342_P017	Maize	cytosol	24.78	15.21
Zm00001d042979_P007	Maize	nucleus	24.78	14.96
Zm00001d006355_P011	Maize	cytosol	25.22	14.32
Zm00001d012452_P004	Maize	nucleus	22.99	13.22
Zm00001d002418_P030	Maize	nucleus, plastid	26.34	12.87
Zm00001d017754_P031	Maize	nucleus, plastid	26.34	12.54
Zm00001d031231_P057	Maize	nucleus	26.34	12.19
Zm00001d026246_P001	Maize	cytosol	24.33	11.87
Zm00001d041183_P004	Maize	nucleus	26.56	11.39
Zm00001d013405_P004	Maize	nucleus	26.12	10.41
Zm00001d033798_P030	Maize	mitochondrion	25.67	9.93

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100501850	MapMan:18.4.3.2	Gene3D:3.30.200.20	UniProt:A0A1D6N7L2	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	ProteinID:ONM36576.1	ProteinID:ONM36577.1
ProteinID:ONM36579.1	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF44
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000843A25B	EnsemblPlantsGene:Zm00001d042938
EnsemblPlants:Zm00001d042938_P003	EnsemblPlants:Zm00001d042938_T003	SEG:seg	:	:	:

Description

Serine/threonine-protein kinase AFC1

Coordinates

chr3:+:184559986..184565461

Molecular Weight (calculated)

51825.7 Da

IEP (calculated)

8.400

GRAVY (calculated)

-0.312

Length

448 amino acids

Sequence
(BLAST)

001: MEAQWLAEYP HQGADKRPRK RARLAWDVAP TLFQPPKAIP MLYCGQELIN GNFTTAFLPP PSIYYTGPPR NISPPWRPDD KDGHYVFAVG ENLTPRCIFL
101: QLNDHLLLAL DRILNKMGEG TFGQVLECWD LENQEAVAIK IVRSLQKYRE AAMIEIDVLQ RLGKHDFTGS RCVQIRNWFD YRNHICIVFE KLGPSLYDFL
201: RKNSYRSFPI DLVREFARQI LESVAFMHDL RLIHTDLKPE NILLVSSESI RVPDYKVSIR PPKDGSFFKN LPKSSAIKLI DFGSTTFESQ DHNYVVSTRH
301: YRAPEVILGL GWNYPCDLWS VGCILVELCS GEALFQTHEN LEHLAMMEKV LGPLPKHMIV RADRRAEKYF KRGVRLDWPE GAASRESMKA VWKLPRLQNL
401: VMQHVDHSAG DLIDLLQGLL RYDPNERLKA HEALQHPFFT RCIRRCGF

Best Arabidopsis Sequence Match ( AT3G53570.1 )
(BLAST)

001: MQSSVYRDKA SSIAMILETQ RNVEFPHRIV DKRPRKRPRL TWDAAPPLLP PPPPPTVFQP PLYYGPEFAS GLVPNFVYPN MFYNGLPRQG SPPWRPDDKD
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN

Arabidopsis Description

AFC1AT3G53570 protein [Source:UniProtKB/TrEMBL;Acc:B9DH08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.