Factsheet for TraesCS6B01G283400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G241200.1	Wheat	cytosol	99.08	99.08
TraesCS6D01G223400.1	Wheat	nucleus	98.85	98.85
HORVU6Hr1G061750.11	Barley	nucleus	98.62	98.39
Os01t0837900-01	Rice	nucleus	92.86	92.86
KXG33666	Sorghum	cytosol	92.17	92.17
Zm00001d042938_P003	Maize	cytosol	91.94	89.06
VIT_08s0040g02640.t01	Wine grape	nucleus	79.49	80.42
GSMUA_Achr5P29170_001	Banana	nucleus	79.95	79.59
GSMUA_Achr9P03190_001	Banana	nucleus	77.88	77.52
PGSC0003DMT400061423	Potato	nucleus	76.5	77.03
KRH67569	Soybean	nucleus	75.58	73.87
Bra007012.1-P	Field mustard	cytosol	74.42	73.24
CDX78188	Canola	cytosol	74.42	70.99
CDX73543	Canola	nucleus	75.35	70.93
AT3G53570.1	Thale cress	cytosol	75.81	70.45
KRG95853	Soybean	cytosol	46.54	70.38
CDX76200	Canola	endoplasmic reticulum, plasma membrane, plastid	21.43	67.88
TraesCS6B01G238900.1	Wheat	cytosol	66.82	67.44
TraesCS5B01G371800.1	Wheat	cytosol	65.67	67.22
TraesCS3B01G242600.2	Wheat	cytosol	59.68	66.75
CDY52749	Canola	nucleus	73.5	39.29
CDY07581	Canola	nucleus	73.04	37.78
TraesCS5B01G355100.1	Wheat	cytosol	26.73	27.29
TraesCS5B01G392200.1	Wheat	nucleus	26.96	20.82
TraesCS4B01G044900.1	Wheat	nucleus	26.27	18.01
TraesCS1B01G301500.1	Wheat	cytosol	27.42	16.81
TraesCS2B01G258500.1	Wheat	nucleus	25.35	15.85
TraesCS3B01G384000.1	Wheat	nucleus	25.35	15.11
TraesCS5B01G001400.1	Wheat	nucleus	27.88	12.67
TraesCS2B01G456400.3	Wheat	nucleus	26.27	12.28
TraesCS6B01G297900.11	Wheat	nucleus, plastid	26.96	12.15
TraesCS4B01G051900.1	Wheat	nucleus	26.5	10.4

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF44
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS6B01G283400	EnsemblPlants:TraesCS6B01G283400.1
TIGR:cd14134	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:511698351..511702211

Molecular Weight (calculated)

50511.0 Da

IEP (calculated)

8.595

GRAVY (calculated)

-0.437

Length

434 amino acids

Sequence
(BLAST)

001: MEAQWLAEYP HQAADNRPRK RPRLAWDAAP QLFPPPKAIP MLYCGQELIN GNFTTAFLPP PPIYYAGPPR NLSPPWRPDD KDGHYVFTLG ENLTPRYRIL
101: SKMGEGTFGQ VLECWDLENQ ESVAIKIVRS LQKYREAAMI EIDVLQRLGK HDFTGSRCVQ IRNWFDYRNH ICIVFEKLGP SLYDFLRKNN YRSFAIDLVR
201: EFARQILESV TFMHDLRLIH TDLKPENILL VSPDTIRVHD YKIPIRPPKD GSVFKNLPKS SAIKLIDFGS TTFDHQDHNY VVSTRHYRAP EVILGLGWNY
301: PCDLWSVGCI LVELCSEEAL FQTHENLEHL AMMEKVLGPL PKHMIARADR RAEKYFRRGL RLDWPEGAAS RESMKAVWKL PRLQNLVMQH VDHSAGDLID
401: LLQGLLRYDP DERLKARQAL QHPFFTRCHR RCGY

Best Arabidopsis Sequence Match ( AT3G53570.1 )
(BLAST)

001: MQSSVYRDKA SSIAMILETQ RNVEFPHRIV DKRPRKRPRL TWDAAPPLLP PPPPPTVFQP PLYYGPEFAS GLVPNFVYPN MFYNGLPRQG SPPWRPDDKD
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN

Arabidopsis Description

AFC1AT3G53570 protein [Source:UniProtKB/TrEMBL;Acc:B9DH08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.