Factsheet for TraesCS6B01G297900.11

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G244300.3	Wheat	nucleus, plastid	93.46	95.85
TraesCS6A01G270800.6	Wheat	nucleus, plastid	93.46	95.74
HORVU0Hr1G016820.3	Barley	plastid	85.88	91.58
HORVU6Hr1G068620.1	Barley	nucleus	88.78	91.35
Os02t0702500-01	Rice	cytosol, nucleus, plastid	74.35	76.25
EES05664	Sorghum	nucleus	72.48	74.26
Zm00001d017754_P031	Maize	nucleus, plastid	70.82	72.48
TraesCS2B01G456400.3	Wheat	nucleus	61.58	63.9
CDY06452	Canola	plasma membrane	30.63	55.56
GSMUA_Achr8P14500_001	Banana	nucleus	51.19	51.14
GSMUA_AchrUn_...	Banana	nucleus	37.49	50.7
VIT_16s0039g00610.t01	Wine grape	plasma membrane, vacuole	44.96	47.63
Bra035364.1-P	Field mustard	nucleus	43.61	46.36
Solyc03g097350.2.1	Tomato	plastid	45.59	46.26
CDX74622	Canola	nucleus	42.99	45.8
CDY37643	Canola	nucleus	43.09	45.5
KRH07651	Soybean	nucleus	44.76	45.32
KRH45354	Soybean	nucleus	44.76	45.04
Bra039487.1-P	Field mustard	nucleus	43.72	44.83
CDY38548	Canola	nucleus	43.41	44.52
AT5G35980.1	Thale cress	nucleus	43.61	43.93
TraesCS3B01G242600.2	Wheat	cytosol	11.21	27.84
TraesCS6B01G283400.1	Wheat	nucleus	12.15	26.96
TraesCS6B01G238900.1	Wheat	cytosol	11.53	25.81
TraesCS5B01G371800.1	Wheat	cytosol	11.21	25.47
TraesCS5B01G355100.1	Wheat	cytosol	10.9	24.71
TraesCS5B01G392200.1	Wheat	nucleus	13.6	23.31
TraesCS1B01G301500.1	Wheat	cytosol	13.91	18.93
TraesCS3B01G384000.1	Wheat	nucleus	14.23	18.82
TraesCS4B01G044900.1	Wheat	nucleus	12.36	18.8
TraesCS2B01G258500.1	Wheat	nucleus	12.46	17.29
TraesCS4B01G051900.1	Wheat	nucleus	15.06	13.11
TraesCS5B01G001400.1	Wheat	nucleus	12.56	12.67

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.3	MapMan:27.7.3	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24058	PANTHER:PTHR24058:SF68	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G297900	EnsemblPlants:TraesCS6B01G297900.11	SEG:seg	:

Description

No Description!

Coordinates

chr6B:-:534515572..534523433

Molecular Weight (calculated)

106515.0 Da

IEP (calculated)

8.559

GRAVY (calculated)

-0.432

Length

963 amino acids

Sequence
(BLAST)

001: MEETGRERKA AGPPPWAPTK STVFRSYAAA VVGDRAEAPS ARGNGVAARS SNLRAVRKRP IVARLTRDIV QTFEKCNPEF NYVDSLNPKH FLTSPAVPVH
101: NDGLDNANSD LILYVNLELV NKKSDRRYIV EEMLGQGTFG QVAKCWDAET NSYVAVKVIK NQPAFYQQAI MEVSLLSMLN DKFDPDDQHH IVRMLDFFPW
201: KNHLCITFEM LGHNLYELLK KNNLRGLQLQ FVRTFSRQIL DALIVMKGAG IIHCDLKPEN ILITPKVNSA AGVKVIDFGS ACMEGKTIYS YIQSRYYRSP
301: EVLLGYPARY TTAIDMWSFG CIVAELYIGL PLFPGASEYD VLSRMIEIVG GQPPDDLLRE AKNTRKFFKH VGSIYPGNEA HDGLCSSYRV LTEDEVEARD
401: SKKPKIGKWY FPRGRLDRLI FAYPWKNLNE GNLPETEKED CLALVDFLRG LVEFDPNKRW SPLQASYHPF ITGEAFTGPY EPFRETPVIP VGRAATVDHN
501: PGGGHWLAAG LSPQVGSINR SLPFNNIFPP KMPFSYGSSC GSFGSRGSFN DNVGPPSSYG SYDVNNVNMY HSPLGPSGFN LQSQAGGTFL GFSPDIRRRP
601: HLSHGVGIRL SPGGPGPMSL GGSPSQFTPP NSQTQMPTSA TAKYVATSPA RGSHGSSLGK AAVVGQYNRR RNLGHPPMSM PPHEYTSQLI QGPHGDSVSS
701: AFVRGHSGYS YGALPNSGHY NWRPQIGVST GLSTNSSSNH GYVQPSGYND FRPLHSSNVR ADTSTSSSVP DPADWDPNYS DESLLQEDNS LSAELGSVHL
801: RDASGRTIQS GRLPNIQSHD IAGSNQRNDF LFHAPSLRES GHSTGRVNYD SYNHANYSQR NFAGRQGQPF QRYNHMNSTS IRPTGNLQNV QSAWSKYGMP
901: DSTSPPRMVE GMPWGNEWFH CCALGGLLLI LLLTLPWLLC SCHLQSRSSV IMLCMNLFYS SLR

Best Arabidopsis Sequence Match ( AT2G40120.1 )
(BLAST)

001: MAVDVKSVLE FLRRNGLTEA ESALRDDINE KNKLASFDFE KFLFPIPTPI KITASSRPSD SGGDGSNSKS SSSDDEFVSL DSSTSGFCSS SGFVNPYGDS
101: SSSSDGQSQF GTARTYPEWS EFYLHNETED EDEFMSPAFR ESDCFILPEN AEDKFITDNQ FENSLGVYDR SSSQGSLTEA SLDYLDKPFL LDIGLEDKTD
201: ELDLKTGDQL NVTDEEVDVV HEVEDEYEVF NLRIIHWKNR TGFEENKDLP IVINTVIGGR YYITEYIGSA AFSKVVQAQD LHNGVDVCLK IIKNDKDFFD
301: QSLDEIKLLK HVNKHDPADE HHILRLYDYF YHQEHLFIVC ELLRANLYEF QKFNQESGGE PYFNLSRLQV ITRQCLDALV FLHGLGIIHC DLKPENILIK
401: SYKRCAVKII DLGSSCFRSD NLCLYVQSRS YRAPEVILGL PYDEKIDLWS LGCILAELCS GEVLFPNEAV AMILARIVAV LGPIETEMLE KGQETHKYFT
501: KEYDLYHLNE ESNEIEYIIT EESSLEEQLQ VSDELFLDFV RTLLDINPLR RPTALEALNH PWLSSSSSYN

Arabidopsis Description

Hypothetical Ser-Thr protein kinase [Source:UniProtKB/TrEMBL;Acc:Q9XEE4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.