Factsheet for TraesCS5B01G371800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6A01G219000.2
TraesCS6A01G349500.1
TraesCS6B01G248500.1
TraesCS6B01G382600.1
TraesCS6D01G202100.1
TraesCS6D01G332000.1
TraesCS7A01G152800.1
TraesCS7B01G056600.2
TraesCSU01G104300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G24740.1	TraesCS6A01G219000.2	AT4G31580.1	10593939
AT4G24740.1	TraesCS6A01G349500.1	AT4G31580.1	10593939
AT4G24740.1	TraesCS6B01G248500.1	AT4G31580.1	10593939
AT4G24740.1	TraesCS6B01G382600.1	AT4G31580.1	10593939
AT4G24740.1	TraesCS6D01G202100.1	AT4G31580.1	10593939
AT4G24740.1	TraesCS6D01G332000.1	AT4G31580.1	10593939
AT4G24740.1	TraesCS7A01G152800.1	AT4G31580.1	10593939
AT4G24740.1	TraesCS7B01G056600.2	AT4G31580.1	10593939
AT4G24740.1	TraesCSU01G104300.1	AT4G31580.1	10593939

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G369500.2	Wheat	cytosol	99.76	99.76
TraesCS5D01G378900.2	Wheat	cytosol, mitochondrion	99.76	99.76
HORVU5Hr1G091970.12	Barley	cytosol, mitochondrion	99.53	99.53
KXG35096	Sorghum	cytosol	85.14	85.14
Zm00001d005361_P007	Maize	cytosol, plastid	82.08	82.46
GSMUA_Achr11P...	Banana	cytosol	63.21	79.06
VIT_17s0000g09500.t01	Wine grape	nucleus	73.58	71.72
PGSC0003DMT400046853	Potato	cytosol	71.23	69.91
KRH57157	Soybean	cytosol	70.75	69.77
KRH63654	Soybean	nucleus	69.81	69.65
KRH54290	Soybean	cytosol, nucleus	69.34	69.18
AT4G24740.1	Thale cress	nucleus	69.1	68.62
Solyc03g112050.2.1	Tomato	cytosol	62.5	68.3
VIT_01s0137g00580.t01	Wine grape	nucleus	68.63	67.36
TraesCS6B01G238900.1	Wheat	cytosol	68.16	67.21
TraesCS3B01G242600.2	Wheat	cytosol	61.32	67.01
PGSC0003DMT400030615	Potato	nucleus	67.22	66.43
Solyc05g013770.2.1	Tomato	nucleus	67.45	66.36
TraesCS6B01G283400.1	Wheat	nucleus	67.22	65.67
KRH03872	Soybean	nucleus	71.23	63.98
CDY34307	Canola	plastid	69.81	40.72
CDY03422	Canola	plastid	69.58	40.58
Bra013829.1-P	Field mustard	nucleus	67.22	39.8
TraesCS5B01G355100.1	Wheat	cytosol	25.71	25.65
TraesCS5B01G392200.1	Wheat	nucleus	27.12	20.46
TraesCS4B01G044900.1	Wheat	nucleus	26.42	17.69
TraesCS2B01G258500.1	Wheat	nucleus	25.71	15.71
TraesCS1B01G301500.1	Wheat	cytosol	25.94	15.54
TraesCS3B01G384000.1	Wheat	nucleus	25.71	14.97
TraesCS5B01G001400.1	Wheat	nucleus	27.12	12.04
TraesCS2B01G456400.3	Wheat	nucleus	24.76	11.31
TraesCS6B01G297900.11	Wheat	nucleus, plastid	25.47	11.21
TraesCS4B01G051900.1	Wheat	nucleus	28.07	10.76
CDY03423	Canola	cytosol, peroxisome, plastid	1.18	1.6
Bra013830.1-P	Field mustard	plastid	0.47	0.68

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF52
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS5B01G371800	EnsemblPlants:TraesCS5B01G371800.1
TIGR:cd14134	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:550226158..550230211

Molecular Weight (calculated)

48262.2 Da

IEP (calculated)

8.830

GRAVY (calculated)

-0.387

Length

424 amino acids

Sequence
(BLAST)

001: MATRCAAAAD LPAGRPRKRA RHGWDVAPAT KAQITFCGQE VGDMTTMVLP SHPPDYTCFS LLSKGVARNA SPPRREDDKD GHYVFAVGEN LTSRYKIYRK
101: MGEGTFGQVL ECWDRERKEM VAIKIVRAVN KYSDAAMIEI DVLQKLARND ATGKHCVQIR NWFDYRNHIC IVCEKLGPSL YDFLRKTAYR PFPIDLVREL
201: GEQLLESVAF MHGLKLIHTD LKPENILLVS SEDAKLAENK DGSFSKKVPK SSAIKLIDFG STAYDHQDCS YIVSTRHYRA PEVILGHGWS YPCDIWSIGC
301: ILVELCSGET LFQTHENLEH LAMMERVLGP LPRHMLERAD HHAQKYIRRG RLNWPEGATT RESMRAVLKL PRLQNLVMQH VDHSAGDLIG LLQGLLAYEP
401: SARLTAQEAL SHRFFRRHRE RRSL

Best Arabidopsis Sequence Match ( AT3G53570.1 )
(BLAST)

001: MQSSVYRDKA SSIAMILETQ RNVEFPHRIV DKRPRKRPRL TWDAAPPLLP PPPPPTVFQP PLYYGPEFAS GLVPNFVYPN MFYNGLPRQG SPPWRPDDKD
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN

Arabidopsis Description

AFC1AT3G53570 protein [Source:UniProtKB/TrEMBL;Acc:B9DH08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.