Factsheet for Bra013829.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra023994.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G24740.1	Bra023994.1-P	AT4G31580.1	10593939

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03423	Canola	cytosol, peroxisome, plastid	42.32	96.81
AT4G24740.1	Thale cress	nucleus	54.33	91.1
VIT_17s0000g09500.t01	Wine grape	nucleus	49.44	81.38
KRH63654	Soybean	nucleus	48.18	81.18
KRH57157	Soybean	cytosol	48.32	80.47
KRH54290	Soybean	cytosol, nucleus	47.63	80.24
PGSC0003DMT400046853	Potato	cytosol	46.09	76.39
GSMUA_Achr11P...	Banana	cytosol	35.61	75.22
Solyc03g112050.2.1	Tomato	cytosol	40.08	73.97
KRH03872	Soybean	nucleus	48.74	73.94
GSMUA_Achr8P28600_001	Banana	cytosol	20.95	69.44
TraesCS6B01G238900.1	Wheat	cytosol	40.64	67.67
TraesCS6D01G193300.1	Wheat	cytosol	40.64	67.67
TraesCS6A01G210100.1	Wheat	cytosol	40.64	67.67
Os12t0460800-03	Rice	cytosol	17.74	67.55
TraesCS5A01G369500.2	Wheat	cytosol	39.8	67.22
HORVU5Hr1G091970.12	Barley	cytosol, mitochondrion	39.8	67.22
TraesCS5B01G371800.1	Wheat	cytosol	39.8	67.22
TraesCS5D01G378900.2	Wheat	cytosol, mitochondrion	39.8	67.22
KXG35096	Sorghum	cytosol	39.25	66.27
KXG30551	Sorghum	cytosol	40.92	65.7
Zm00001d005361_P007	Maize	cytosol, plastid	38.41	65.17
GSMUA_Achr3P17160_001	Banana	cytosol	40.78	65.03
Zm00001d017096_P005	Maize	cytosol	39.8	64.04
Zm00001d050970_P003	Maize	cytosol	39.8	63.9
Bra007012.1-P	Field mustard	cytosol	39.25	63.72
Bra003146.1-P	Field mustard	nucleus	39.66	63.25
HORVU6Hr1G053760.52	Barley	cytosol	38.41	63.07
Bra011368.1-P	Field mustard	nucleus	32.54	58.54
KXG37288	Sorghum	cytosol	30.17	56.4
CDY34307	Canola	plastid	56.84	55.98
CDY03422	Canola	plastid	56.7	55.85
Bra017716.1-P	Field mustard	nucleus	14.94	24.88
Bra011619.1-P	Field mustard	nucleus	14.94	24.1
Bra002070.1-P	Field mustard	cytosol	14.66	24.03
Bra028159.1-P	Field mustard	cytosol	12.01	23.37
Bra020218.1-P	Field mustard	nucleus	15.22	20.76
Bra002433.1-P	Field mustard	nucleus	15.22	20.34
Bra006970.1-P	Field mustard	nucleus	16.2	18.8
Bra004984.1-P	Field mustard	cytosol	14.66	17.86
Bra017026.1-P	Field mustard	cytosol	13.83	17.81
Bra035364.1-P	Field mustard	nucleus	15.22	12.03
Bra039487.1-P	Field mustard	nucleus	14.8	11.29
Bra022240.1-P	Field mustard	nucleus	16.2	11.16
Bra025165.1-P	Field mustard	nucleus	13.97	11.1
Bra017346.1-P	Field mustard	nucleus	13.69	11.01
Bra015990.1-P	Field mustard	nucleus	16.34	10.84
Bra003844.1-P	Field mustard	nucleus	16.2	9.76
Bra003145.1-P	Field mustard	plastid	0.42	0.91
Bra013830.1-P	Field mustard	plastid	0.28	0.68

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.2	Gene3D:3.30.200.20	Gene3D:3.60.21.10	EnsemblPlantsGene:Bra013829	EnsemblPlants:Bra013829.1
EnsemblPlants:Bra013829.1-P	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0016787	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR029052	InterPro:Kinase-like_dom_sf	UniProt:M4DBG9	InterPro:Metallo-depent_PP-like	PFAM:PF00069	PFAM:PF00149
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF102	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	SUPFAM:SSF56300	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002546650	SEG:seg	:

Description

AT4G24740 (E=2e-227) AFC2, AME1 | AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 2); kinase/ protein kinase

Coordinates

chrA01:-:7978297..7982934

Molecular Weight (calculated)

81744.2 Da

IEP (calculated)

7.248

GRAVY (calculated)

-0.387

Length

716 amino acids

Sequence
(BLAST)

001: MEMERVHEFP HTHMDRRPRK RARLGWDVLP TAPKAQVGMF CGQEIGNLSS FGAPSEISSS SLSVKTVARN DSPPWREDDK DGHYMFELGD DLTPRYKIYS
101: KMGEGTFGQV LECWDRERKE MVAVKIVRGV KKYREAAMIE IEMLQQLGKH DKGGNRCVQI RNWFDYRNHI CIVFEKLGSS LYDFLRKNNY RSFPIDLVRE
201: IGWQLLECVA FMHDLRMIHT DLKPENILLV SSDYVKIPEY KGSRLQRDVS YKRVPKSSAI KVIDFGSTTY ERQEQSYIVS TRHYRAPEVI LGLGWSYPCD
301: VWSIGCIIVE LCTGEALFQT HENLEHLAMM ERVLGPLPQQ MLKKVDRHAE KYVRRGRLDW PDGATSRDSL KAVLKLPRLQ NLIMQHVDHS AGDLINMVQD
401: KFTMGSVTTQ PLFSFGVIAD VQYADIPDGR SFLGTPRYYR NSILVLQKAV QAWNQHGHLK FVINMGDIVD GFCPKDQSLS ATKKLVNEFQ KFQGPVYHMI
501: GNHCLYNLPR RELLPLLNIP SRDDDNNAYY EFSPAPEYRV VVLDGYDISA VGWPEDHPKT MAALKILEEK NPNSEKNSPE GLVGVERRFV KYNGGVGEKQ
601: LEWLDGVLKD ATELNQRVIV CGHVPMSPGC ASSAALLWNF DEVMSVIHKY DVVKVCLSGH DHKGGYFVDS RGVHHRSLEA ALECPPGTYS FGYVDVYENK
701: LSLVGTGRML STDFEI

Best Arabidopsis Sequence Match ( AT4G24740.1 )
(BLAST)

001: MEMERVHEFP HTHMDRRPRK RARLGWDVLP QATKAQVGMF CGQEIGNISS FASSGAPSDN SSSLCVKGVA RNGSPPWRED DKDGHYIFEL GDDLTPRYKI
101: YSKMGEGTFG QVLECWDRER KEMVAVKIVR GVKKYREAAM IEIEMLQQLG KHDKGGNRCV QIRNWFDYRN HICIVFEKLG SSLYDFLRKN NYRSFPIDLV
201: REIGWQLLEC VAFMHDLRMI HTDLKPENIL LVSSDYVKIP EYKGSRLQRD VCYKRVPKSS AIKVIDFGST TYERQDQTYI VSTRHYRAPE VILGLGWSYP
301: CDVWSVGCII VELCTGEALF QTHENLEHLA MMERVLGPFP QQMLKKVDRH SEKYVRRGRL DWPDGATSRD SLKAVLKLPR LQNLIMQHVD HSAGELINMV
401: QGLLRFDPSE RITAREALRH PFFARRR

Arabidopsis Description

AFC2At4g24740 [Source:UniProtKB/TrEMBL;Acc:Q1EBU3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.