Factsheet for Bra003146.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007012.1-P	Field mustard	cytosol	92.65	94.33
Bra011368.1-P	Field mustard	nucleus	54.12	61.06
Bra013829.1-P	Field mustard	nucleus	63.25	39.66
Bra017716.1-P	Field mustard	nucleus	24.94	26.05
Bra011619.1-P	Field mustard	nucleus	24.94	25.23
Bra028159.1-P	Field mustard	cytosol	20.27	24.73
Bra002070.1-P	Field mustard	cytosol	24.05	24.71
Bra020218.1-P	Field mustard	nucleus	25.61	21.9
Bra002433.1-P	Field mustard	nucleus	25.84	21.64
Bra006970.1-P	Field mustard	nucleus	27.62	20.1
Bra004984.1-P	Field mustard	cytosol	24.28	18.54
Bra017026.1-P	Field mustard	cytosol	22.49	18.17
Bra035364.1-P	Field mustard	nucleus	26.28	13.02
Bra017346.1-P	Field mustard	nucleus	24.72	12.47
Bra039487.1-P	Field mustard	nucleus	25.61	12.25
Bra025165.1-P	Field mustard	nucleus	24.28	12.1
Bra022240.1-P	Field mustard	nucleus	24.94	10.78
Bra015990.1-P	Field mustard	nucleus	25.39	10.57
Bra003844.1-P	Field mustard	nucleus	24.94	9.43
Bra003145.1-P	Field mustard	plastid	2.45	3.35
Bra013830.1-P	Field mustard	plastid	0.45	0.68

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.2	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra003146	EnsemblPlants:Bra003146.1	EnsemblPlants:Bra003146.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4CG14	PFAM:PF00069
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF44	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00025413BA	SEG:seg	:	:

Description

AT3G53570 (E=4e-231) AFC1, AME2 | AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase

Coordinates

chrA07:-:11570445..11572920

Molecular Weight (calculated)

52094.7 Da

IEP (calculated)

9.287

GRAVY (calculated)

-0.477

Length

449 amino acids

Sequence
(BLAST)

001: MILETRRNVE FPHRNVDKRP RKRPRLAWDA PPPLPPPSSV FHPPLYYGPE FASGVVPSFG YPNMFYNGLP RQGSPPWRPD DKDGHFSFVV GDTLTPRYQI
101: LSKMGEGTFG QVLECFDDKH KEAVAIKVIR SVPKYREAAM IEIDVLQRLS RHDVGGSRCV QIRNWFDYRN HICIVFEKLG PSLYDFLRKN SYRSFPIDLV
201: RELGRQLLES VAYMHDLRLI HTDLKPENIL LVSSEYIKIP DYKFLSRPTR DGSYFKNLPK SSAIKLIDFG STTLEHQDHN HIVSTRHYRA PEVILGVGWN
301: YPCDLWSIGC ILVELCSGEA LFQTHENLEH LAMMERVLGP LPPHMVLRAD RRSDRYFRRG AKLDWPEGAT SRDSLKAVWK LPRLPNLIMQ HVDHSAGDLI
401: DLLLGLLRYD PTERLKAREA LNHPFFTRSR EQSIPFNQNP HPFLYNHKN

Best Arabidopsis Sequence Match ( AT3G53570.1 )
(BLAST)

001: MQSSVYRDKA SSIAMILETQ RNVEFPHRIV DKRPRKRPRL TWDAAPPLLP PPPPPTVFQP PLYYGPEFAS GLVPNFVYPN MFYNGLPRQG SPPWRPDDKD
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN

Arabidopsis Description

AFC1AT3G53570 protein [Source:UniProtKB/TrEMBL;Acc:B9DH08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.