Factsheet for Bra007012.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78188	Canola	cytosol	100.0	96.92
Bra003146.1-P	Field mustard	nucleus	94.33	92.65
AT3G53570.1	Thale cress	cytosol	95.92	90.58
VIT_08s0040g02640.t01	Wine grape	nucleus	78.46	80.65
KRH67569	Soybean	nucleus	76.87	76.35
PGSC0003DMT400061423	Potato	nucleus	74.6	76.33
Os01t0837900-01	Rice	nucleus	75.06	76.27
KXG33666	Sorghum	cytosol	75.06	76.27
TraesCS6A01G241200.1	Wheat	cytosol	74.15	75.35
HORVU6Hr1G061750.11	Barley	nucleus	73.92	74.94
TraesCS6D01G223400.1	Wheat	nucleus	73.7	74.88
GSMUA_Achr5P29170_001	Banana	nucleus	73.7	74.54
TraesCS6B01G283400.1	Wheat	nucleus	73.24	74.42
KRG95853	Soybean	cytosol	47.85	73.52
GSMUA_Achr9P03190_001	Banana	nucleus	72.34	73.17
Zm00001d042938_P003	Maize	cytosol	74.15	72.99
Bra011368.1-P	Field mustard	nucleus	54.88	60.8
Bra013829.1-P	Field mustard	nucleus	63.72	39.25
Bra017716.1-P	Field mustard	nucleus	25.4	26.05
Bra011619.1-P	Field mustard	nucleus	25.4	25.23
Bra028159.1-P	Field mustard	cytosol	20.63	24.73
Bra002070.1-P	Field mustard	cytosol	24.49	24.71
Bra020218.1-P	Field mustard	nucleus	26.08	21.9
Bra002433.1-P	Field mustard	nucleus	26.3	21.64
Bra006970.1-P	Field mustard	nucleus	28.12	20.1
Bra004984.1-P	Field mustard	cytosol	24.49	18.37
Bra017026.1-P	Field mustard	cytosol	22.9	18.17
Bra035364.1-P	Field mustard	nucleus	26.53	12.91
Bra017346.1-P	Field mustard	nucleus	25.17	12.47
Bra039487.1-P	Field mustard	nucleus	26.3	12.35
Bra025165.1-P	Field mustard	nucleus	24.26	11.88
Bra022240.1-P	Field mustard	nucleus	25.85	10.97
Bra015990.1-P	Field mustard	nucleus	26.3	10.75
Bra003844.1-P	Field mustard	nucleus	25.85	9.6
Bra003145.1-P	Field mustard	plastid	2.04	2.74
Bra013830.1-P	Field mustard	plastid	0.45	0.68

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.2	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra007012	EnsemblPlants:Bra007012.1	EnsemblPlants:Bra007012.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4CS20	PFAM:PF00069
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF44	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002542F90	SEG:seg	:	:

Description

AT3G53570 (E=7e-237) AFC1, AME2 | AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase

Coordinates

chrA09:-:26823617..26826166

Molecular Weight (calculated)

51052.5 Da

IEP (calculated)

9.479

GRAVY (calculated)

-0.425

Length

441 amino acids

Sequence
(BLAST)

001: MILETQRIVD KRPRKRPRLA WDAAPPPPPP TVFHPPLYYG QEFASGVAPS FVYPNMFYNG FPRQGSPPWR PDDKDGHFVF VVGDTLTPRY QILSKMGEGT
101: FGQVLECFDN KNKEAVAIKV IRSVNKYREA AMIEIDVLQR LTRHDVGGSR CVQIRNWFDY RNHICIVFEK LGPSLYDFLR KNSYRSFPID LVRELGRQLL
201: ESVAYMHDLR LIHTDLKPEN ILLVSSEYIK IPDYKFLSRP TKDGSYFKNL PKSSAIKLID FGSTTFEHQD HNYIVSTRHY RAPEVILGVG WNYPCDLWSI
301: GCILVELCSG EALFQTHENL EHLAMMERVL GPLPPHMVLR ADRRSERYFR RGAKLHWPEG ATSRDSLKAV WKLPRLPNLI MQHVDHSAGD LIDLLQGLLR
401: YDPAARLKAR EALNHPFFTR SREQSIPFNP NPGPFLYNHK N

Best Arabidopsis Sequence Match ( AT3G53570.1 )
(BLAST)

001: MQSSVYRDKA SSIAMILETQ RNVEFPHRIV DKRPRKRPRL TWDAAPPLLP PPPPPTVFQP PLYYGPEFAS GLVPNFVYPN MFYNGLPRQG SPPWRPDDKD
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN

Arabidopsis Description

AFC1AT3G53570 protein [Source:UniProtKB/TrEMBL;Acc:B9DH08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.