Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400061423 | Potato | nucleus | 84.85 | 84.45 |
KRH67569 | Soybean | nucleus | 86.25 | 83.33 |
GSMUA_Achr5P29170_001 | Banana | nucleus | 83.92 | 82.57 |
GSMUA_Achr9P03190_001 | Banana | nucleus | 82.75 | 81.42 |
Os01t0837900-01 | Rice | nucleus | 81.59 | 80.65 |
KXG33666 | Sorghum | cytosol | 81.35 | 80.41 |
HORVU6Hr1G061750.11 | Barley | nucleus | 81.12 | 80.0 |
TraesCS6A01G241200.1 | Wheat | cytosol | 80.89 | 79.95 |
TraesCS6D01G223400.1 | Wheat | nucleus | 80.65 | 79.72 |
TraesCS6B01G283400.1 | Wheat | nucleus | 80.42 | 79.49 |
Bra007012.1-P | Field mustard | cytosol | 80.65 | 78.46 |
VIT_17s0000g09500.t01 | Wine grape | nucleus | 79.02 | 77.93 |
Zm00001d042938_P003 | Maize | cytosol | 80.89 | 77.46 |
AT3G53570.1 | Thale cress | cytosol | 83.68 | 76.87 |
KRG95853 | Soybean | cytosol | 51.28 | 76.66 |
CDX73543 | Canola | nucleus | 81.82 | 76.14 |
CDX78188 | Canola | cytosol | 80.65 | 76.04 |
VIT_01s0137g00580.t01 | Wine grape | nucleus | 72.73 | 72.22 |
CDX76200 | Canola | endoplasmic reticulum, plasma membrane, plastid | 21.68 | 67.88 |
VIT_04s0008g04220.t01 | Wine grape | nucleus | 61.77 | 65.92 |
CDY52749 | Canola | nucleus | 81.12 | 42.86 |
CDY07581 | Canola | nucleus | 80.89 | 41.36 |
VIT_07s0031g02130.t01 | Wine grape | cytosol | 25.41 | 24.55 |
VIT_08s0007g04220.t01 | Wine grape | nucleus | 27.97 | 21.54 |
VIT_06s0061g01050.t01 | Wine grape | nucleus | 27.51 | 21.53 |
VIT_13s0067g00960.t01 | Wine grape | cytosol | 26.57 | 15.66 |
VIT_16s0039g00610.t01 | Wine grape | plasma membrane, vacuole | 27.27 | 12.87 |
VIT_01s0011g03350.t01 | Wine grape | nucleus | 27.51 | 10.83 |
VIT_01s0011g01590.t01 | Wine grape | mitochondrion | 26.34 | 6.24 |
Protein Annotations
Gene3D:1.10.510.10 | EntrezGene:100251648 | wikigene:100251648 | MapMan:18.4.3.2 | Gene3D:3.30.200.20 | EMBL:AM483981 |
ProteinID:CAN73108 | ProteinID:CAN73108.1 | ProteinID:CBI32671 | ProteinID:CBI32671.3 | UniProt:D7TQF1 | EMBL:FN596008 |
GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 |
GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 |
GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | EntrezGene:LOC100251648 | wikigene:LOC100251648 |
PFAM:PF00069 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24058 | PANTHER:PTHR24058:SF44 | InterPro:Prot_kinase_dom |
SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | TIGR:TC53594 | UniParc:UPI0001983CCC | ArrayExpress:VIT_08s0040g02640 |
EnsemblPlantsGene:VIT_08s0040g02640 | EnsemblPlants:VIT_08s0040g02640.t01 | unigene:Vvi.1074 | RefSeq:XP_002278124 | RefSeq:XP_002278124.1 | RefSeq:XP_010653503.1 |
SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr8:+:13661508..13667661
Molecular Weight (calculated)
50108.7 Da
IEP (calculated)
9.394
GRAVY (calculated)
-0.463
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: METQRITEFP HKNMDKRPRK RPRLTWDMPP PLPPPKVVPG MYCSQEFVSN YPYSSLFYKG VTRNGSPPWR PDDKDGHYIF AIGENLTPRY RIISKMGEGT
101: FGQVLECFDN DKKEVVAIKI VRSIHKYREA AMIEIDVLQK LARHDVGGTR CVQIRNWFDY RNHICIVFEK LGPSLYDFLR KNSYRSFPID LVRELGRQLL
201: ESVAFMHDLR LIHTDLKPEN ILLVSSDYIK VPDYKFLSRT IKDGSYFKNL PKSSAIKLID FGSTTFEHQD HNYVVSTRHY RAPEVILGLG WNYPCDLWSV
301: GCILIELCSG EALFQTHENL EHLAMMERVL GPLPQHMVLR ADRRAEKYFR RGARLDWPEG ATSRESMRAV WKLPRLQNLV MQHVDHSAGD LIDLLQGLLR
401: YDPAERLKAR EALRHPFFTR DARRCGYPL
101: FGQVLECFDN DKKEVVAIKI VRSIHKYREA AMIEIDVLQK LARHDVGGTR CVQIRNWFDY RNHICIVFEK LGPSLYDFLR KNSYRSFPID LVRELGRQLL
201: ESVAFMHDLR LIHTDLKPEN ILLVSSDYIK VPDYKFLSRT IKDGSYFKNL PKSSAIKLID FGSTTFEHQD HNYVVSTRHY RAPEVILGLG WNYPCDLWSV
301: GCILIELCSG EALFQTHENL EHLAMMERVL GPLPQHMVLR ADRRAEKYFR RGARLDWPEG ATSRESMRAV WKLPRLQNLV MQHVDHSAGD LIDLLQGLLR
401: YDPAERLKAR EALRHPFFTR DARRCGYPL
001: MQSSVYRDKA SSIAMILETQ RNVEFPHRIV DKRPRKRPRL TWDAAPPLLP PPPPPTVFQP PLYYGPEFAS GLVPNFVYPN MFYNGLPRQG SPPWRPDDKD
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN
Arabidopsis Description
AFC1AT3G53570 protein [Source:UniProtKB/TrEMBL;Acc:B9DH08]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.