Factsheet for VIT_16s0039g00610.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06452	Canola	plasma membrane	43.12	73.82
KRH07651	Soybean	nucleus	72.83	69.61
KRH45354	Soybean	nucleus	72.5	68.86
Solyc03g097350.2.1	Tomato	plastid	69.97	67.02
Bra035364.1-P	Field mustard	nucleus	66.67	66.89
CDY38548	Canola	nucleus	68.65	66.45
CDX74622	Canola	nucleus	65.9	66.26
Bra039487.1-P	Field mustard	nucleus	68.21	66.03
CDY37643	Canola	nucleus	65.79	65.57
AT5G35980.1	Thale cress	nucleus	68.21	64.85
GSMUA_Achr8P14500_001	Banana	nucleus	59.3	55.91
GSMUA_AchrUn_...	Banana	nucleus	40.7	51.97
HORVU0Hr1G016820.3	Barley	plastid	48.51	48.84
Os02t0702500-01	Rice	cytosol, nucleus, plastid	50.16	48.56
TraesCS6D01G244300.3	Wheat	nucleus, plastid	48.84	47.28
HORVU6Hr1G068620.1	Barley	nucleus	48.62	47.22
EES05664	Sorghum	nucleus	48.73	47.13
TraesCS2D01G433100.1	Wheat	nucleus	47.85	46.93
TraesCS6A01G270800.6	Wheat	nucleus, plastid	48.51	46.91
TraesCS2B01G456400.3	Wheat	nucleus	47.85	46.88
KXG27048	Sorghum	nucleus	47.08	46.67
TraesCS2A01G436800.1	Wheat	nucleus	47.52	46.6
Zm00001d002418_P030	Maize	nucleus, plastid	46.75	46.35
Zm00001d017754_P031	Maize	nucleus, plastid	47.3	45.7
Os04t0602800-01	Rice	nucleus	45.98	45.24
TraesCS6B01G297900.11	Wheat	nucleus, plastid	47.63	44.96
Zm00001d026246_P001	Maize	cytosol	44.99	44.55
VIT_04s0008g04220.t01	Wine grape	nucleus	12.54	28.36
VIT_08s0040g02640.t01	Wine grape	nucleus	12.87	27.27
VIT_07s0031g02130.t01	Wine grape	cytosol	13.2	27.03
VIT_17s0000g09500.t01	Wine grape	nucleus	12.87	26.9
VIT_01s0137g00580.t01	Wine grape	nucleus	12.54	26.39
VIT_08s0007g04220.t01	Wine grape	nucleus	13.64	22.26
VIT_06s0061g01050.t01	Wine grape	nucleus	13.31	22.08
VIT_13s0067g00960.t01	Wine grape	cytosol	15.4	19.23
VIT_01s0011g03350.t01	Wine grape	nucleus	12.98	10.83
VIT_01s0011g01590.t01	Wine grape	mitochondrion	16.28	8.17

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100240775	wikigene:100240775	MapMan:18.4.3.3	MapMan:27.7.3	Gene3D:3.30.200.20
ProteinID:CBI26420	ProteinID:CBI26420.3	UniProt:D7T7E9	EMBL:FN595750	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004713	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009506
GO:GO:0009719	GO:GO:0009737	GO:GO:0009789	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0018108	GO:GO:0019538	GO:GO:0046777	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100240775
wikigene:LOC100240775	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058
PANTHER:PTHR24058:SF17	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0001BE2981	ArrayExpress:VIT_16s0039g00610	EnsemblPlantsGene:VIT_16s0039g00610	EnsemblPlants:VIT_16s0039g00610.t01	unigene:Vvi.11833	RefSeq:XP_002267912
RefSeq:XP_002267912.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr16:+:316837..332541

Molecular Weight (calculated)

99823.5 Da

IEP (calculated)

8.435

GRAVY (calculated)

-0.430

Length

909 amino acids

Sequence
(BLAST)

001: MEFCIDIHFL LFPPVQLVAR LTKDIVETYQ ICNPQFKYSE ELNPKRFLTS PSIGVLNDGH DNVNSDLILA VNSVLVNSET QRRYIIKDIL GHGTFGQVAK
101: CWVTETNSFT AVKIIKNQPA YYQQALVEVS ILTTLNKKYD PEDKNHIVRI YDYFVHQRHL CIAFELLDTN LYELIKINHF RGLSLSIVQL FSKQILRGLA
201: LMKDAGIIHC DLKPENILLC TRVKPAEIKI IDFGSACMED RTVYSYIQSR YYRSPEVLLG YQYTTAIDMW SFGCIVAELF LGLPLFPGAS EFDLLRRMIQ
301: ILGGQPPDYV LKEAKNTSKF FKCIGSFHHV ENGDVSMGGR SAYLALSEED YEARELKKPS IGKEYFIHKN LEAIVTNYPY RKNLAEEDIV KESRVRLALI
401: DFLRGLVEFD PAKRWSPFQA SKHPFVTGEP FTCPYRPPAE TPRVPVAQNV KVDHHPGGGH WFAAGLSPNI PGRNRATLHN SPHFQVVPYA HASSYGSLGS
501: HGSYNDGTGL GSSYGSYGDN SNMFAYYSPA GPSAMNIHAQ GGVSMLGTSP DARRRIIPFP HGNGLGVSPS AGNFAPLPLG TSPSQFTPPN SYSQVSTGSP
601: GHYGPTSPAR GSCHGSPLGK MAAVSQFNRR KSWGYSGSLQ SQESSSSAHW QGHFTDGTSS NQSEGNSQAF GGSPLHLQSN SNATSWKQQR GGSGIAFQNI
701: PSSFTLGSNV QFAQTAGVVH EKPESSLLLP DPGDWDPNYS DELLLQDDGS DMATEFSKGM HLGQNFGSAE PLVGVGRFGH ASSTSSNTSR PIQPFSHAEV
801: GSPPTHDPHA GYVRPMSKPS HFVPHISQNS PSRLGQQPIQ RLNHGRSTAG RGSDWSQTKP SPPNFSSGGP RSPGNSSFSN GMSWGRRANH PVTNLPPTSY
901: GRKDYGRIA

Best Arabidopsis Sequence Match ( AT5G35980.1 )
(BLAST)

001: MDDIDSSDGA AAARAGEIGS IGVSTPWKPI QLVFKRYLPQ NGSASKVHVA VKKPVVVRLT RDLVETYKIC DPQFKYRGEL NPKRYLTTPS VGVNNDGFDN
101: VNYDLILAVN DDFCSSDSRQ RYIVKDLLGH GTFGQVAKCW VPETNSFVAV KVIKNQLAYY QQALVEVSIL TTLNKKYDPE DKNHIVRIYD YFLHQSHLCI
201: CFELLDMNLY ELIKINQFRG LSLSIVKLFS KQILLGLALL KDAGIIHCDL KPENILLCAS VKPTEIKIID FGSACMEDKT VYSYIQSRYY RSPEVLLGYQ
301: YTTAIDMWSF GCIVAELFLG LPLFPGGSEF DILRRMIEIL GKQPPDYVLK EAKNTNKFFK CVGSVHNLGN GGTYGGLKSA YMALTGEEFE AREKKKPEIG
401: KEYFNHKNLE EIVKSYPYKI NLPEDDVVKE TQIRLALIDF LKGLMEFDPA KRWSPFQAAK HPFITGEPFT CPYNPPPETP RVHVTQNIKV DHHPGEGHWF
501: AAGLSPHVSG RTRIPMHNSP HFQMMPYSHA NSYGSIGSYG SYNDGTIQDN SYGSYGGTGN MFAYYSPVNH PGLYMQNQGG VSMLGTSPDA RRRVMQYPHG
601: NGPNGLGTSP SAGNFAPLPL GTSPSQFTPN TNNQFLAGSP GHHGPTSPVR NSCHGSPLGK MAAFSQINRR MSAGYSGGSQ SQDSSLSQAQ GHGMDNFYQN
701: EGYSGQFSGS PSRRQLDSGV KNRKQTQGGT TLSTGYSTHN NANSSLRSNM YNPSSTAHHL ENPDTALSVP DPGDWDPNYS DDLLLEEDSA DESSLANAFS
801: RGMQLGSTDA SSYSRRFNSN ASTSSSNPTT QRRYAPNQAF SQVETGSPPS NDPHARFGQH IPGSQYIPHV SQNSPSRLGQ QPPQRYNHGR PNAGRTMDRN
901: HMNAQLPPSN TNSGGQQRSP RSSSYTNGVP WGRRTNNHVP NVPSTSHGRV DYGSIA

Arabidopsis Description

YAK1Dual specificity protein kinase YAK1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q8RWH3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.