Factsheet for VIT_08s0007g04220.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32624	Soybean	nucleus	77.92	79.34
KRH20002	Soybean	nucleus	73.43	78.81
VIT_06s0061g01050.t01	Wine grape	nucleus	75.94	77.19
GSMUA_Achr8P26710_001	Banana	cytosol	60.86	76.52
GSMUA_Achr8P04590_001	Banana	nucleus	63.91	74.48
PGSC0003DMT400021639	Potato	nucleus	68.22	72.38
Solyc10g085720.1.1	Tomato	nucleus	67.68	72.08
AT3G53030.1	Thale cress	nucleus	68.4	72.02
PGSC0003DMT400006951	Potato	mitochondrion, nucleus	69.48	70.75
HORVU7Hr1G058230.1	Barley	cytosol	14.0	70.27
Solyc09g008790.2.1	Tomato	cytosol	69.84	70.22
HORVU4Hr1G018630.1	Barley	cytosol, mitochondrion, nucleus, plastid	22.62	68.85
CDX78145	Canola	nucleus	67.33	68.56
HORVU3Hr1G049750.1	Barley	mitochondrion	22.08	67.21
Os03t0748400-01	Rice	nucleus	49.01	66.75
Zm00001d013273_P003	Maize	nucleus	67.15	66.31
HORVU5Hr1G094810.3	Barley	nucleus	66.61	66.13
TraesCS5D01G397000.1	Wheat	nucleus	66.61	66.01
TraesCS5B01G392200.1	Wheat	nucleus	66.61	66.01
TraesCS5A01G387100.1	Wheat	nucleus	66.25	65.66
EER93458	Sorghum	nucleus	66.79	65.61
HORVU1Hr1G034750.1	Barley	cytosol	18.67	65.41
HORVU6Hr1G019910.4	Barley	cytosol	18.49	64.78
HORVU2Hr1G091920.1	Barley	cytosol	33.57	61.72
HORVU3Hr1G021690.1	Barley	cytosol	27.47	61.69
HORVU7Hr1G090500.1	Barley	cytosol	32.5	61.15
HORVU1Hr1G094650.1	Barley	nucleus	32.14	60.88
Bra006970.1-P	Field mustard	nucleus	67.15	60.62
HORVU3Hr1G021740.1	Barley	cytosol	27.47	59.77
HORVU4Hr1G059640.3	Barley	golgi, mitochondrion, plasma membrane	38.6	59.56
CDX73580	Canola	nucleus	67.68	59.46
Zm00001d034010_P002	Maize	mitochondrion, nucleus	64.99	57.19
VIT_07s0031g02130.t01	Wine grape	cytosol	45.06	56.53
HORVU5Hr1G046420.1	Barley	nucleus	26.21	56.15
HORVU2Hr1G066530.1	Barley	nucleus	39.86	54.95
HORVU1Hr1G082710.1	Barley	nucleus, plastid	41.29	54.63
HORVU6Hr1G081350.5	Barley	nucleus	34.29	52.91
HORVU7Hr1G121360.1	Barley	cytosol, mitochondrion, nucleus	31.06	52.11
VIT_04s0008g04220.t01	Wine grape	nucleus	21.36	29.6
VIT_08s0040g02640.t01	Wine grape	nucleus	21.54	27.97
VIT_17s0000g09500.t01	Wine grape	nucleus	21.01	26.9
VIT_01s0137g00580.t01	Wine grape	nucleus	20.29	26.16
VIT_13s0067g00960.t01	Wine grape	cytosol	20.47	15.66
VIT_16s0039g00610.t01	Wine grape	plasma membrane, vacuole	22.26	13.64
VIT_01s0011g03350.t01	Wine grape	nucleus	21.36	10.92
VIT_01s0011g01590.t01	Wine grape	mitochondrion	20.83	6.4

Protein Annotations

EntrezGene:100254468	wikigene:100254468	MapMan:18.4.3.5	Gene3D:3.30.200.20	ProteinID:CCB55377	ProteinID:CCB55377.1
UniProt:F6HKF5	EMBL:FN595991	GO:GO:0000166	GO:GO:0000245	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	GO:GO:0050684	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100254468	wikigene:LOC100254468	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24055	PANTHER:PTHR24055:SF228	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00015C95BC	ArrayExpress:VIT_08s0007g04220	EnsemblPlantsGene:VIT_08s0007g04220	EnsemblPlants:VIT_08s0007g04220.t01
RefSeq:XP_002277869	RefSeq:XP_002277869.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr8:+:18196368..18203268

Molecular Weight (calculated)

62411.0 Da

IEP (calculated)

6.466

GRAVY (calculated)

-0.590

Length

557 amino acids

Sequence
(BLAST)

001: MGDKQEEDRS ESSDYTSEDE GTEDYRRGGY HAVRIGDTFK NGRYIVQTKL GWGHFSTVWL AWDTLNSRYV ALKVQKSAQH YTEAAMDEIT ILQQIAEGDP
101: DDKKCVVKLL DHFKHSGPNG QHVCMVFEYL GDNLLTLIKY TDYHGLPLHM VKEICFHVLE GLDYLHGQLS IIHTDLKPEN ILLLSMIDPS KDPRKSGATL
201: ILPSNKDKNV FESGVGKDIK TSNGDLTKNQ KKKIRRKAKQ AAKGCVEKDA AVEAEPDPET SGALESSPNV KLDLASVEDQ PNSSGNGDRL LDADGKKGPG
301: QGNQGHRRGS HSMRQKLLAS VDLKCKLVDF GNACWTYKQF TNDIQTRQYR CPEVILGSKY STSADLWSFA CICFELATGD VLFDPHSGDN FDRDEDHLAL
401: MMELLGMMPR KIALGGQYSR EFFNRYGDLR HIRRLRFWPM NKVLVEKYEF SEKDANDMAD FLVPILDFVP EKRPTAAQCL LHPWISAGPL LLEPSMPSVK
501: IQAGESVICE KKKREKDERE AMEIGMGNIA ISADSKPVED PQSSSKPSSK ASTSAPR

Best Arabidopsis Sequence Match ( AT3G53030.1 )
(BLAST)

001: MEAEKWNSDG GEYTSEDEGT EDYRRGGYHA VRIGDSFKTG RYVVQSKLGW GHFSTVWLSW DTQSSRYVAL KVQKSAQHYT EAAMDEITIL QQIAEGDTDD
101: TKCVVKLLDH FKHSGPNGQH VCMVFEYLGD NLLTLIKYSD YRGLPIPMVK EICYHMLVGL DYLHKQLSII HTDLKPENVL LPSTIDPSKD PRKSGAPLVL
201: PTDKDNTVVD SNGDFVKNQK TGSHRKAKLS AQGHAENKGN TESDKVRGVG SPVNGKQCAA EKSVEEDCPS TSDAIELDGS EKGKQGGKKG SRSSRRHLVA
301: SADLKCKLVD FGNACWTYKQ FTSDIQTRQY RCPEVILGSK YSTSADLWSF ACICFELVTG DVLFDPHSGD NYDRDEDHLA LMMELLGMMP RKIALGGRYS
401: RDFFNRHGDL RHIRRLRFWP MNKVLTEKYE FSEQDANDLS DFLVSILDFV PEKRPTAAQC LLHPWINSGP RSIKPSLKDE NSDKLDTEKN KRENEEQEAV
501: EVKMGNVVIS SLDSKPGMSQ SSSTLKLAI

Arabidopsis Description

SRPK4Ser/arg-rich protein kinase 4 [Source:UniProtKB/TrEMBL;Acc:F4J982]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.