CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013273_P003	Maize	nucleus	93.65	94.15
Os03t0748400-01	Rice	nucleus	61.2	84.84
HORVU4Hr1G018630.1	Barley	cytosol, mitochondrion, nucleus, plastid	26.81	83.06
HORVU3Hr1G049750.1	Barley	mitochondrion	26.28	81.42
TraesCS5A01G387100.1	Wheat	nucleus	80.25	80.96
TraesCS5D01G397000.1	Wheat	nucleus	80.07	80.78
TraesCS5B01G392200.1	Wheat	nucleus	79.89	80.61
HORVU5Hr1G094810.3	Barley	nucleus	79.37	80.21
GSMUA_Achr8P26710_001	Banana	cytosol	62.43	79.91
Zm00001d034010_P002	Maize	mitochondrion, nucleus	89.07	79.78
HORVU1Hr1G034750.1	Barley	cytosol	22.22	79.25
HORVU3Hr1G021690.1	Barley	cytosol	34.22	78.23
GSMUA_Achr8P04590_001	Banana	nucleus	65.61	77.82
HORVU2Hr1G091920.1	Barley	cytosol	40.92	76.57
HORVU3Hr1G021740.1	Barley	cytosol	34.57	76.56
HORVU1Hr1G094650.1	Barley	nucleus	39.68	76.53
HORVU7Hr1G090500.1	Barley	cytosol	39.86	76.35
HORVU7Hr1G058230.1	Barley	cytosol	14.64	74.77
HORVU5Hr1G046420.1	Barley	nucleus	32.63	71.15
HORVU4Hr1G059640.3	Barley	golgi, mitochondrion, plasma membrane	45.15	70.91
HORVU2Hr1G066530.1	Barley	nucleus	49.03	68.81
VIT_06s0061g01050.t01	Wine grape	nucleus	65.43	67.7
HORVU1Hr1G082710.1	Barley	nucleus, plastid	49.74	66.98
VIT_08s0007g04220.t01	Wine grape	nucleus	65.61	66.79
HORVU6Hr1G081350.5	Barley	nucleus	42.15	66.2
AT3G44850.1	Thale cress	nucleus	62.26	66.1
KRH26554	Soybean	nucleus	63.32	65.87
KRH22757	Soybean	nucleus	63.32	65.75
KRH32624	Soybean	nucleus	62.79	65.08
AT5G22840.1	Thale cress	nucleus	61.73	65.06
AT3G53030.1	Thale cress	nucleus	60.49	64.84
Solyc10g085720.1.1	Tomato	nucleus	59.61	64.63
Bra020218.1-P	Field mustard	nucleus	59.79	64.57
CDY26961	Canola	nucleus	60.85	64.25
CDY09171	Canola	nucleus	56.08	64.11
Solyc06g074700.2.1	Tomato	nucleus	62.43	64.01
KRH20002	Soybean	nucleus	58.55	63.97
Bra002433.1-P	Field mustard	nucleus	60.32	63.81
CDX92332	Canola	nucleus	60.32	63.81
Solyc09g008790.2.1	Tomato	cytosol	61.2	62.64
Solyc11g066650.1.1	Tomato	nucleus	63.49	62.18
CDX78145	Canola	nucleus	59.79	61.97
EER99321	Sorghum	cytosol	43.03	57.55
Bra006970.1-P	Field mustard	nucleus	59.96	55.11
KRH25147	Soybean	mitochondrion	53.44	54.79
CDX73580	Canola	nucleus	60.14	53.79
EER99364	Sorghum	cytosol	40.74	31.34
EES00987	Sorghum	mitochondrion	20.81	30.57
KXG35096	Sorghum	cytosol	20.46	27.36
KXG33666	Sorghum	cytosol	20.81	27.19
KXG30551	Sorghum	cytosol	20.46	26.01
KXG37288	Sorghum	cytosol	16.93	25.07
OQU78157	Sorghum	nucleus, plastid	20.11	17.59
EES01706	Sorghum	nucleus	20.81	16.37
OQU80322	Sorghum	nucleus	15.7	14.5
EES05664	Sorghum	nucleus	23.1	13.94
KXG27048	Sorghum	nucleus	22.22	13.74
KXG24155	Sorghum	nucleus	19.93	11.82
KXG37702	Sorghum	nucleus	21.34	10.99
PGSC0003DMT400068117	Potato	nucleus	1.06	1.42

Protein Annotations

MapMan:18.4.3.5	Gene3D:3.30.200.20	EntrezGene:8086251	UniProt:C5X151	EnsemblPlants:EER93458	ProteinID:EER93458
ProteinID:EER93458.1	GO:GO:0000166	GO:GO:0000245	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	GO:GO:0050684	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24055	PANTHER:PTHR24055:SF228
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3001G090100	SUPFAM:SSF56112	unigene:Sbi.21155
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A8268B	RefSeq:XP_002466460.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:6976616..6980879

Molecular Weight (calculated)

62907.4 Da

IEP (calculated)

6.681

GRAVY (calculated)

-0.601

Length

567 amino acids

Sequence
(BLAST)

001: MAEAEAAGSL SRRRMEGEEG AAAMEADAGH RGRGEAEEAE DEEVESSDYT SEDEGTEDYR RGGYHSVRVG DSFKQGTYVV QSKLGWGHFS TVWLAWDTAH
101: SRYVALKVQK SAQHYTEAAM DEIKILKQIA DGDPDDSKCV VKLLDHFKHS GPNGNHVCMV FEFLGDNLLT LIKYTDYRGI PLPMVKEICR HVLIGLDYLH
201: RTLSIIHTDL KPENILLVST IDPSKDPRKS GLPLVLPSAR TDEPPPKVPA QSGNGGLTKN QKKKIRKKAK RAAAATSEGS SAVASADTDG SDDRGDLGTT
301: NEGSPIQDGA KKRATRDRRG SKGAKKKMAM EADLKCKLVD FGNACWTYKQ FTSDIQTRQY RCPEVILGSK YSTSADLWSF ACICFELATG DVLFDPHSGD
401: NFDRDEDHLA LMMELLGMMP RKIALGGRYS RDFFNRYGDL RHIRRLRFWP LNKVLMEKYE FTEVNAIGMA DFLVPILDFV PEKRPTAAQL LQHPWLDVGP
501: LRQQPKTLPD SAQSSVDGVS EKQKKENEER DAMALELGNI AIDGASSRMA NDPQASTNKT TAIPSKK

Best Arabidopsis Sequence Match ( AT3G53030.1 )
(BLAST)

001: MEAEKWNSDG GEYTSEDEGT EDYRRGGYHA VRIGDSFKTG RYVVQSKLGW GHFSTVWLSW DTQSSRYVAL KVQKSAQHYT EAAMDEITIL QQIAEGDTDD
101: TKCVVKLLDH FKHSGPNGQH VCMVFEYLGD NLLTLIKYSD YRGLPIPMVK EICYHMLVGL DYLHKQLSII HTDLKPENVL LPSTIDPSKD PRKSGAPLVL
201: PTDKDNTVVD SNGDFVKNQK TGSHRKAKLS AQGHAENKGN TESDKVRGVG SPVNGKQCAA EKSVEEDCPS TSDAIELDGS EKGKQGGKKG SRSSRRHLVA
301: SADLKCKLVD FGNACWTYKQ FTSDIQTRQY RCPEVILGSK YSTSADLWSF ACICFELVTG DVLFDPHSGD NYDRDEDHLA LMMELLGMMP RKIALGGRYS
401: RDFFNRHGDL RHIRRLRFWP MNKVLTEKYE FSEQDANDLS DFLVSILDFV PEKRPTAAQC LLHPWINSGP RSIKPSLKDE NSDKLDTEKN KRENEEQEAV
501: EVKMGNVVIS SLDSKPGMSQ SSSTLKLAI

Arabidopsis Description

SRPK4Ser/arg-rich protein kinase 4 [Source:UniProtKB/TrEMBL;Acc:F4J982]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.