CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER87987
EES07659
OQU85289

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G24740.1	EER87987	AT4G31580.1	10593939
AT4G24740.1	EES07659	AT4G31580.1	10593939
AT4G24740.1	OQU85289	AT4G31580.1	10593939

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005361_P007	Maize	cytosol, plastid	93.16	93.6
TraesCS5A01G369500.2	Wheat	cytosol	85.38	85.38
HORVU5Hr1G091970.12	Barley	cytosol, mitochondrion	85.38	85.38
TraesCS5D01G378900.2	Wheat	cytosol, mitochondrion	85.14	85.14
TraesCS5B01G371800.1	Wheat	cytosol	85.14	85.14
GSMUA_Achr11P...	Banana	cytosol	62.74	78.47
VIT_17s0000g09500.t01	Wine grape	nucleus	73.58	71.72
KRH57157	Soybean	cytosol	70.52	69.53
KRH63654	Soybean	nucleus	69.34	69.18
KRH54290	Soybean	cytosol, nucleus	69.34	69.18
PGSC0003DMT400046853	Potato	cytosol	70.05	68.75
VIT_01s0137g00580.t01	Wine grape	nucleus	69.58	68.29
AT4G24740.1	Thale cress	nucleus	68.4	67.92
Solyc03g112050.2.1	Tomato	cytosol	62.03	67.78
PGSC0003DMT400030615	Potato	nucleus	67.22	66.43
Solyc05g013770.2.1	Tomato	nucleus	67.45	66.36
EES00987	Sorghum	mitochondrion	59.91	65.8
KXG33666	Sorghum	cytosol	67.22	65.67
KXG30551	Sorghum	cytosol	66.98	63.68
KRH03872	Soybean	nucleus	70.75	63.56
KXG37288	Sorghum	cytosol	51.18	56.66
CDY34307	Canola	plastid	68.4	39.89
CDY03422	Canola	plastid	68.16	39.75
Bra013829.1-P	Field mustard	nucleus	66.27	39.25
EER99321	Sorghum	cytosol	26.18	26.18
EER93458	Sorghum	nucleus	27.36	20.46
OQU78157	Sorghum	nucleus, plastid	25.24	16.51
EES01706	Sorghum	nucleus	27.83	16.37
OQU80322	Sorghum	nucleus	23.58	16.29
EER99364	Sorghum	cytosol	25.94	14.93
KXG24155	Sorghum	nucleus	27.83	12.34
KXG27048	Sorghum	nucleus	25.71	11.89
EES05664	Sorghum	nucleus	25.0	11.28
KXG37702	Sorghum	nucleus	29.01	11.17
CDY03423	Canola	cytosol, peroxisome, plastid	1.18	1.6
Bra013830.1-P	Field mustard	plastid	0.47	0.68

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.2	Gene3D:3.30.200.20	UniProt:A0A1B6QAZ9	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	EnsemblPlants:KXG35096	ProteinID:KXG35096	ProteinID:KXG35096.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF52	InterPro:Prot_kinase_dom	SMART:SM00220
EnsemblPlantsGene:SORBI_3002G132000	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00022070E7	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:18787317..18792189

Molecular Weight (calculated)

47803.5 Da

IEP (calculated)

8.408

GRAVY (calculated)

-0.288

Length

424 amino acids

Sequence
(BLAST)

001: MATECAAAAA DLATGRPRKR ARFGWDVAPA AEAQIGTFCG QEVGDVASLL LSANPSDHTC SSLLPKGVAR NASPPWREDD KDGHYVFAVG ENLTSRYKIY
101: RKMGEGTFGQ VLECWDRESK EMVAIKIVRS VKKYSDAAMI EIDVLQKLAR NDAAGKHCVQ IRNWFDYRSH ICIVCEKLGP SLYDFLQKTG FRPFPIDLVR
201: QIGVQLLESV AFMHRLQLIH TDLKPENILL VSSDYVKLPD PKDGSFSRKL PKSSAVKLID FGSAAYHHQD RSYIVSTRHY RAPEVILGHG WSYPCDIWSV
301: GCILVELCSG ETLFQTHENL EHLAMMERVL GPLPRHMLER ADQHAEKYVR RGRLNWPEGA ATKESIRAVL KLPRLQNLVM QHVDHSAGDF IDLLKRLLAY
401: EPSARLTAQE ALSHVFFTRH GKNQ

Best Arabidopsis Sequence Match ( AT4G24740.1 )
(BLAST)

001: MEMERVHEFP HTHMDRRPRK RARLGWDVLP QATKAQVGMF CGQEIGNISS FASSGAPSDN SSSLCVKGVA RNGSPPWRED DKDGHYIFEL GDDLTPRYKI
101: YSKMGEGTFG QVLECWDRER KEMVAVKIVR GVKKYREAAM IEIEMLQQLG KHDKGGNRCV QIRNWFDYRN HICIVFEKLG SSLYDFLRKN NYRSFPIDLV
201: REIGWQLLEC VAFMHDLRMI HTDLKPENIL LVSSDYVKIP EYKGSRLQRD VCYKRVPKSS AIKVIDFGST TYERQDQTYI VSTRHYRAPE VILGLGWSYP
301: CDVWSVGCII VELCTGEALF QTHENLEHLA MMERVLGPFP QQMLKKVDRH SEKYVRRGRL DWPDGATSRD SLKAVLKLPR LQNLIMQHVD HSAGELINMV
401: QGLLRFDPSE RITAREALRH PFFARRR

Arabidopsis Description

AFC2At4g24740 [Source:UniProtKB/TrEMBL;Acc:Q1EBU3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.