Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 4
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
HORVU6Hr1G083840.4 | |
HORVU7Hr1G031320.1 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT4G24740.1 | HORVU6Hr1G083840.4 | AT4G31580.1 | 10593939 |
AT4G24740.1 | HORVU7Hr1G031320.1 | AT4G31580.1 | 10593939 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5B01G371800.1 | Wheat | cytosol | 99.53 | 99.53 |
TraesCS5D01G378900.2 | Wheat | cytosol, mitochondrion | 99.29 | 99.29 |
TraesCS5A01G369500.2 | Wheat | cytosol | 99.29 | 99.29 |
KXG35096 | Sorghum | cytosol | 85.38 | 85.38 |
Zm00001d005361_P007 | Maize | cytosol, plastid | 82.31 | 82.7 |
GSMUA_Achr11P... | Banana | cytosol | 62.97 | 78.76 |
VIT_17s0000g09500.t01 | Wine grape | nucleus | 73.58 | 71.72 |
KRH57157 | Soybean | cytosol | 70.75 | 69.77 |
PGSC0003DMT400046853 | Potato | cytosol | 70.99 | 69.68 |
KRH63654 | Soybean | nucleus | 69.81 | 69.65 |
KRH54290 | Soybean | cytosol, nucleus | 69.34 | 69.18 |
AT4G24740.1 | Thale cress | nucleus | 69.1 | 68.62 |
Solyc03g112050.2.1 | Tomato | cytosol | 62.26 | 68.04 |
VIT_01s0137g00580.t01 | Wine grape | nucleus | 68.63 | 67.36 |
PGSC0003DMT400030615 | Potato | nucleus | 67.22 | 66.43 |
Solyc05g013770.2.1 | Tomato | nucleus | 67.45 | 66.36 |
HORVU6Hr1G061750.11 | Barley | nucleus | 67.22 | 65.52 |
KRH03872 | Soybean | nucleus | 71.23 | 63.98 |
HORVU6Hr1G053760.52 | Barley | cytosol | 65.33 | 63.53 |
HORVU3Hr1G051340.19 | Barley | golgi, plasma membrane, plastid | 60.85 | 61.43 |
CDY34307 | Canola | plastid | 69.81 | 40.72 |
CDY03422 | Canola | plastid | 69.58 | 40.58 |
Bra013829.1-P | Field mustard | nucleus | 67.22 | 39.8 |
HORVU5Hr1G002400.1 | Barley | mitochondrion | 17.69 | 28.09 |
HORVU4Hr1G018630.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 11.56 | 26.78 |
HORVU3Hr1G049750.1 | Barley | mitochondrion | 11.32 | 26.23 |
HORVU7Hr1G058230.1 | Barley | cytosol | 6.6 | 25.23 |
HORVU1Hr1G034750.1 | Barley | cytosol | 9.43 | 25.16 |
HORVU6Hr1G019910.4 | Barley | cytosol | 9.2 | 24.53 |
HORVU3Hr1G021690.1 | Barley | cytosol | 13.44 | 22.98 |
HORVU1Hr1G094650.1 | Barley | nucleus | 15.8 | 22.79 |
HORVU5Hr1G087690.2 | Barley | cytosol, plastid | 26.18 | 22.42 |
HORVU2Hr1G091920.1 | Barley | cytosol | 15.8 | 22.11 |
HORVU7Hr1G090500.1 | Barley | cytosol | 15.09 | 21.62 |
HORVU3Hr1G021740.1 | Barley | cytosol | 12.97 | 21.48 |
HORVU4Hr1G059640.3 | Barley | golgi, mitochondrion, plasma membrane | 17.69 | 20.78 |
HORVU5Hr1G046420.1 | Barley | nucleus | 12.74 | 20.77 |
HORVU1Hr1G082710.1 | Barley | nucleus, plastid | 20.52 | 20.67 |
HORVU2Hr1G066530.1 | Barley | nucleus | 19.58 | 20.54 |
HORVU5Hr1G094810.3 | Barley | nucleus | 26.89 | 20.32 |
HORVU6Hr1G081350.5 | Barley | nucleus | 16.04 | 18.84 |
HORVU7Hr1G121360.1 | Barley | cytosol, mitochondrion, nucleus | 13.92 | 17.77 |
HORVU1Hr1G071160.1 | Barley | nucleus | 25.94 | 15.45 |
HORVU2Hr1G053190.2 | Barley | cytosol | 25.71 | 14.65 |
HORVU4Hr1G007330.12 | Barley | nucleus, plastid | 22.41 | 13.93 |
HORVU0Hr1G016820.3 | Barley | plastid | 25.24 | 11.85 |
HORVU6Hr1G068620.1 | Barley | nucleus | 25.71 | 11.65 |
HORVU5Hr1G000200.27 | Barley | cytosol, nucleus | 25.94 | 11.57 |
HORVU4Hr1G008530.1 | Barley | nucleus | 28.07 | 10.8 |
HORVU5Hr1G000140.1 | Barley | mitochondrion | 6.37 | 4.75 |
HORVU3Hr1G087550.7 | Barley | cytosol | 3.77 | 3.55 |
CDY03423 | Canola | cytosol, peroxisome, plastid | 1.18 | 1.6 |
Bra013830.1-P | Field mustard | plastid | 0.47 | 0.68 |
Protein Annotations
Gene3D:1.10.510.10 | MapMan:18.4.3.2 | Gene3D:3.30.200.20 | EMBL:AK353837 | UniProt:F2CQD5 | GO:GO:0000166 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
GO:GO:0019538 | EnsemblPlantsGene:HORVU5Hr1G091970 | EnsemblPlants:HORVU5Hr1G091970.12 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 |
ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24058 | PANTHER:PTHR24058:SF52 | InterPro:Prot_kinase_dom | SMART:SM00220 |
SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI00020045E1 | SEG:seg | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CQD5]
Coordinates
chrchr5H:-:587385963..587390585
Molecular Weight (calculated)
48188.2 Da
IEP (calculated)
8.950
GRAVY (calculated)
-0.374
Length
424 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRCAAAAD LPAGRPRKRA RHGWDVAPAT KAQITFCGQE VGDMTTMVLP AHPPDYTCFS LLSKGVARNA SPPRREDDKD GHYVFAVGEN LTSRYKIYRK
101: MGEGTFGQVL ECWDRERKEM VAIKIVRAVN KYSDAAMIEI DVLQKLARND ATGKHCVQIR NWFDYRNHIC IVCEKLGPSL YDFLRKTAYR PFPIDLVREL
201: GEQLLESVAF MHGLKLIHTD LKPENILLVS SEDAKLAENK DGSFSKKVPK SSAIKLIDFG STAYGHQDCS YIVSTRHYRA PEVILGHGWS YPCDIWSIGC
301: ILVELCSGET LFQTHENLEH LAMMERVLGP LPRHMLERAD HHAQKYIRRG RLNWPEGATT RESMRAVLKL PRLQNLVMQH VDHSAGDLIG LLQGLLAYEP
401: SARLTAQEAL SHRFFRRHRE RRSL
101: MGEGTFGQVL ECWDRERKEM VAIKIVRAVN KYSDAAMIEI DVLQKLARND ATGKHCVQIR NWFDYRNHIC IVCEKLGPSL YDFLRKTAYR PFPIDLVREL
201: GEQLLESVAF MHGLKLIHTD LKPENILLVS SEDAKLAENK DGSFSKKVPK SSAIKLIDFG STAYGHQDCS YIVSTRHYRA PEVILGHGWS YPCDIWSIGC
301: ILVELCSGET LFQTHENLEH LAMMERVLGP LPRHMLERAD HHAQKYIRRG RLNWPEGATT RESMRAVLKL PRLQNLVMQH VDHSAGDLIG LLQGLLAYEP
401: SARLTAQEAL SHRFFRRHRE RRSL
001: MQSSVYRDKA SSIAMILETQ RNVEFPHRIV DKRPRKRPRL TWDAAPPLLP PPPPPTVFQP PLYYGPEFAS GLVPNFVYPN MFYNGLPRQG SPPWRPDDKD
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN
Arabidopsis Description
AFC1AT3G53570 protein [Source:UniProtKB/TrEMBL;Acc:B9DH08]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.