Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G018630.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 65.41 | 56.83 |
| HORVU3Hr1G049750.1 | Barley | mitochondrion | 64.15 | 55.74 |
| HORVU1Hr1G034750.1 | Barley | cytosol | 41.51 | 41.51 |
| HORVU7Hr1G121360.1 | Barley | cytosol, mitochondrion, nucleus | 76.73 | 36.75 |
| HORVU2Hr1G066530.1 | Barley | nucleus | 75.47 | 29.7 |
| HORVU1Hr1G082710.1 | Barley | nucleus, plastid | 71.07 | 26.84 |
| HORVU3Hr1G021740.1 | Barley | cytosol | 40.25 | 25.0 |
| GSMUA_Achr8P26710_001 | Banana | cytosol | 68.55 | 24.61 |
| HORVU4Hr1G059640.3 | Barley | golgi, mitochondrion, plasma membrane | 55.35 | 24.38 |
| GSMUA_Achr8P04590_001 | Banana | nucleus | 68.55 | 22.8 |
| HORVU5Hr1G094810.3 | Barley | nucleus | 76.1 | 21.57 |
| HORVU2Hr1G091920.1 | Barley | cytosol | 40.88 | 21.45 |
| HORVU1Hr1G094650.1 | Barley | nucleus | 38.99 | 21.09 |
| HORVU7Hr1G090500.1 | Barley | cytosol | 38.36 | 20.61 |
| CDY09171 | Canola | nucleus | 64.15 | 20.56 |
| KRH26554 | Soybean | nucleus | 67.3 | 19.63 |
| AT5G22840.1 | Thale cress | nucleus | 66.04 | 19.52 |
| AT3G44850.1 | Thale cress | nucleus | 65.41 | 19.48 |
| AT3G53030.1 | Thale cress | nucleus | 64.78 | 19.47 |
| Bra020218.1-P | Field mustard | nucleus | 64.15 | 19.43 |
| KRH22757 | Soybean | nucleus | 66.67 | 19.41 |
| Bra002433.1-P | Field mustard | nucleus | 65.41 | 19.4 |
| CDX92332 | Canola | nucleus | 65.41 | 19.4 |
| CDY26961 | Canola | nucleus | 65.41 | 19.37 |
| KRH32624 | Soybean | nucleus | 66.04 | 19.2 |
| Solyc10g085720.1.1 | Tomato | nucleus | 62.26 | 18.93 |
| CDX78145 | Canola | nucleus | 64.78 | 18.83 |
| VIT_06s0061g01050.t01 | Wine grape | nucleus | 64.78 | 18.8 |
| VIT_08s0007g04220.t01 | Wine grape | nucleus | 64.78 | 18.49 |
| HORVU5Hr1G002400.1 | Barley | mitochondrion | 30.82 | 18.35 |
| HORVU6Hr1G081350.5 | Barley | nucleus | 40.88 | 18.01 |
| Solyc06g074700.2.1 | Tomato | nucleus | 62.26 | 17.9 |
| Solyc09g008790.2.1 | Tomato | cytosol | 61.64 | 17.69 |
| Solyc11g066650.1.1 | Tomato | nucleus | 63.52 | 17.44 |
| Bra006970.1-P | Field mustard | nucleus | 64.78 | 16.69 |
| CDX73580 | Canola | nucleus | 65.41 | 16.4 |
| KRH20002 | Soybean | nucleus | 50.94 | 15.61 |
| HORVU5Hr1G087690.2 | Barley | cytosol, plastid | 48.43 | 15.56 |
| KRH25147 | Soybean | mitochondrion | 50.31 | 14.47 |
| HORVU3Hr1G021690.1 | Barley | cytosol | 16.98 | 10.89 |
| HORVU3Hr1G051340.19 | Barley | golgi, plasma membrane, plastid | 26.42 | 10.0 |
| HORVU2Hr1G053190.2 | Barley | cytosol | 46.54 | 9.95 |
| HORVU6Hr1G061750.11 | Barley | nucleus | 25.79 | 9.43 |
| HORVU5Hr1G091970.12 | Barley | cytosol, mitochondrion | 24.53 | 9.2 |
| HORVU6Hr1G053760.52 | Barley | cytosol | 23.9 | 8.72 |
| HORVU1Hr1G071160.1 | Barley | nucleus | 21.38 | 4.78 |
| HORVU4Hr1G007330.12 | Barley | nucleus, plastid | 20.13 | 4.69 |
| HORVU0Hr1G016820.3 | Barley | plastid | 23.9 | 4.21 |
| HORVU5Hr1G000200.27 | Barley | cytosol, nucleus | 24.53 | 4.1 |
| HORVU6Hr1G068620.1 | Barley | nucleus | 23.9 | 4.06 |
| HORVU4Hr1G008530.1 | Barley | nucleus | 23.9 | 3.45 |
| HORVU3Hr1G087550.7 | Barley | cytosol | 8.18 | 2.88 |
| HORVU5Hr1G000140.1 | Barley | mitochondrion | 10.06 | 2.82 |
| HORVU7Hr1G058230.1 | Barley | cytosol | 0.0 | 0.0 |
| HORVU5Hr1G046420.1 | Barley | nucleus | 0.0 | 0.0 |
| PGSC0003DMT400068117 | Potato | nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.510.10 | Gene3D:3.30.200.20 | MapMan:50.2.7 | UniProt:A0A287TI83 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| EnsemblPlantsGene:HORVU6Hr1G019910 | EnsemblPlants:HORVU6Hr1G019910.4 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFscan:PS50011 | PANTHER:PTHR24055 |
| PANTHER:PTHR24055:SF228 | InterPro:Prot_kinase_dom | SUPFAM:SSF56112 | UniParc:UPI000B477726 | : | : |
Description
No Description!
Coordinates
chrchr6H:+:55067331..55069255
Molecular Weight (calculated)
17912.2 Da
IEP (calculated)
7.299
GRAVY (calculated)
-0.333
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: GSSPSHDSPN DVIPLSSDNT CLWPGRHISN SGGYHVVRPG DNFKQGAYVM QSKLSWGHFS TAWLAWDTAH SRYVALKVQK SAQHYSEAAM DEIKILRQIA
101: DGDLEDSRCV VKLLDHFKHT SPNGSHVYMV FEFLGDNLIT LIKYTYYRGI PLPMVKEIC
101: DGDLEDSRCV VKLLDHFKHT SPNGSHVYMV FEFLGDNLIT LIKYTYYRGI PLPMVKEIC
001: MSCSSSSGSE EDDEGFDAYR KGGYHAVRIG DQFAGGRYIA QRKLGWGQFS TVWLAYDTRT SNYVALKIQK SALQFAQAAL HEIELLQAAA DGDPENTKCV
101: IRLIDDFKHA GPNGQHLCMV LEFLGDSLLR LIKYNRYKGM ELSKVREICK CILTGLDYLH RELGMIHSDL KPENILLCST IDPAKDPIRS GLTPILEKPE
201: GNQNGTSTMN LIEKKLKRRA KKAAAKISGR RVSIVGLSET PKKNKRNLDG IDMRCKVVDF GNGCWADNKF AEEIQTRQYR APEVILQSGY SYSVDMWSFA
301: CTAFELATGD MLFAPKEGNG YGEDEDHLAL MMELLGKMPR KVRDQRITLT DTAT
101: IRLIDDFKHA GPNGQHLCMV LEFLGDSLLR LIKYNRYKGM ELSKVREICK CILTGLDYLH RELGMIHSDL KPENILLCST IDPAKDPIRS GLTPILEKPE
201: GNQNGTSTMN LIEKKLKRRA KKAAAKISGR RVSIVGLSET PKKNKRNLDG IDMRCKVVDF GNGCWADNKF AEEIQTRQYR APEVILQSGY SYSVDMWSFA
301: CTAFELATGD MLFAPKEGNG YGEDEDHLAL MMELLGKMPR KVRDQRITLT DTAT
Arabidopsis Description
At2g17530 [Source:UniProtKB/TrEMBL;Acc:Q9SHL5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.