Factsheet for Solyc06g074700.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400018439	Potato	nucleus	95.3	96.52
Solyc11g066650.1.1	Tomato	nucleus	79.57	75.99
GSMUA_Achr8P26710_001	Banana	cytosol	57.87	72.23
KRH22757	Soybean	nucleus	70.71	71.61
KRH26554	Soybean	nucleus	70.16	71.19
AT3G44850.1	Thale cress	nucleus	67.81	70.22
Bra020218.1-P	Field mustard	nucleus	64.56	68.0
GSMUA_Achr8P04590_001	Banana	nucleus	58.77	67.99
CDY09171	Canola	nucleus	60.58	67.54
AT5G22840.1	Thale cress	nucleus	65.64	67.47
CDY26961	Canola	nucleus	65.46	67.41
CDX92332	Canola	nucleus	65.28	67.35
Bra002433.1-P	Field mustard	nucleus	65.28	67.35
HORVU4Hr1G018630.1	Barley	cytosol, mitochondrion, nucleus, plastid	22.06	66.67
Solyc10g085720.1.1	Tomato	nucleus	62.75	66.35
HORVU3Hr1G049750.1	Barley	mitochondrion	21.34	64.48
HORVU7Hr1G058230.1	Barley	cytosol	12.84	63.96
Solyc09g008790.2.1	Tomato	cytosol	64.01	63.9
Os03t0748400-01	Rice	nucleus	46.84	63.33
HORVU1Hr1G034750.1	Barley	cytosol	18.08	62.89
Zm00001d013273_P003	Maize	nucleus	64.01	62.77
EER93458	Sorghum	nucleus	64.01	62.43
HORVU6Hr1G019910.4	Barley	cytosol	17.9	62.26
TraesCS5D01G397000.1	Wheat	nucleus	62.21	61.21
TraesCS5B01G392200.1	Wheat	nucleus	62.21	61.21
KRH25147	Soybean	mitochondrion	61.12	61.12
HORVU5Hr1G094810.3	Barley	nucleus	61.84	60.96
TraesCS5A01G387100.1	Wheat	nucleus	61.66	60.68
HORVU2Hr1G091920.1	Barley	cytosol	32.01	58.42
HORVU3Hr1G021690.1	Barley	cytosol	25.68	57.26
HORVU1Hr1G094650.1	Barley	nucleus	30.38	57.14
HORVU7Hr1G090500.1	Barley	cytosol	30.38	56.76
HORVU3Hr1G021740.1	Barley	cytosol	25.86	55.86
HORVU4Hr1G059640.3	Barley	golgi, mitochondrion, plasma membrane	36.17	55.4
Zm00001d034010_P002	Maize	mitochondrion, nucleus	62.75	54.82
Solyc02g082550.2.1	Tomato	cytosol	43.4	53.81
HORVU5Hr1G046420.1	Barley	nucleus	24.59	52.31
HORVU1Hr1G082710.1	Barley	nucleus, plastid	39.42	51.78
HORVU2Hr1G066530.1	Barley	nucleus	37.61	51.49
HORVU7Hr1G121360.1	Barley	cytosol, mitochondrion, nucleus	30.38	50.6
HORVU6Hr1G081350.5	Barley	nucleus	32.37	49.58
Solyc05g013770.2.1	Tomato	nucleus	20.25	25.99
Solyc03g112050.2.1	Tomato	cytosol	16.64	23.71
Solyc06g051510.2.1	Tomato	cytosol	19.71	21.0
Solyc03g097350.2.1	Tomato	plastid	22.6	13.17
Solyc05g009540.2.1	Tomato	nucleus	20.98	11.54
Solyc03g098150.2.1	Tomato	nucleus	21.34	10.13
Solyc06g072340.2.1	Tomato	nucleus	20.98	9.58

Protein Annotations

MapMan:18.4.3.5	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0000245	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	GO:GO:0050684	InterPro:IPR000719
UniProt:K4C9I8	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24055	PANTHER:PTHR24055:SF228	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc06g074700.2	EnsemblPlants:Solyc06g074700.2.1	UniParc:UPI000276678D	SEG:seg	:

Description

No Description!

Coordinates

chr6:-:46227442..46232197

Molecular Weight (calculated)

61980.3 Da

IEP (calculated)

7.079

GRAVY (calculated)

-0.652

Length

553 amino acids

Sequence
(BLAST)

001: MAEEEERNGG DGSETSDYTS EDEGTEDYKR GGYHAVRIGD TFKLGRYVVQ SKLGWGHFST VWLAWDIQKS TYVALKVQKS AQHYTEAAMD EIAILKQVAE
101: GDPDDKKCVV KLLDHFKHSG PNGQHVCMVF EYLGDNLLTL IKYSDYRGLP IHKVKEICFH VLVGLDYLHR KLSIIHTDLK PENVLLLSMI DPAKDHTKSG
201: TPIILPSNKS KIVSESGASK AVKSLNGDLT KNQKKKIRKK AKRVAQKCAD KEASEETEPH NETTGPEDSA RDEKPEAKSV DEQTSIEASG DVSTKEGHQK
301: IQRHKRGSRS DRQKLLADVD LKCKLVDFGN ACWTYKQFTS DIQTRQYRCP EVILGAKYST SADLWSLACI CFELTTGDVL FDPHSGDGYD RDEDHLALMM
401: ELLGTMPRKI ALGGRHSRDF FNRNGELRHI RRLRFWTLSK VLMEKYDLCE QDANEMADFL VPILDFVPEK RPTAAQCLSH PWITGGPRHL GSSTNSLSEA
501: TENHGPKNNR EKDEREAMEV RVGNIAIDGA PAPVKASQSS DLAKKTYAVS IGK

Best Arabidopsis Sequence Match ( AT3G44850.1 )
(BLAST)

001: MAEDKNNGRV NDESEYSSED EGTEDYKKGG YHTVRVGDTF KNGAYVIQSK LGWGHFSTVW LAWDTQESRY VALKVQKSAQ HYTEAAMDEI KILKQIAEGD
101: SGDKKCVVKL LDHFKHTGPN GKHVCMVFEY LGDNLLSVIK YSDYRGVPLH MVKELCFHIL VGLDYLHREL SIIHTDLKPE NVLLLSTIDP SRDVRRSGVP
201: LVLPITKDKI VSESAVKPET KSYTYNGDLT KNQKKKIRKK AKKVVAQDFG GEEALEESER DSNSEARING NSTVERSEGS STRLMEGEEA REKANKKNGR
301: GSRRGSRSTR QKLLSDIECK CKLVDFGNAC WTYKQFTSDI QTRQYRCPEV VLGSKYSTSA DMWSFACICF ELATGDVLFD PHSGENYDRD EDHLALMMEL
401: LGMMPRKIAL GGRYSRDFFN RQGELRHIRR LRFWPISKVL KEKYDFSEQD AKDMSDFLVT ILEFVPEKRP TAAQCLKHPW FNPGPRLLEP SLKPQQPKGE
501: EEGAANENIE KEKDEREAME AGVGNIAIDV SEPK

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FYC5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.