Factsheet for Solyc03g112050.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc08g069120.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G24740.1	Solyc08g069120.2.1	AT4G31580.1	10593939

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400046853	Potato	cytosol	98.45	88.43
GSMUA_Achr8P28600_001	Banana	cytosol	45.62	81.94
Os12t0460800-03	Rice	cytosol	38.4	79.26
VIT_17s0000g09500.t01	Wine grape	nucleus	85.05	75.86
KRH57157	Soybean	cytosol	80.41	72.56
KRH63654	Soybean	nucleus	79.12	72.24
KRH54290	Soybean	cytosol, nucleus	78.35	71.53
AT4G24740.1	Thale cress	nucleus	78.61	71.43
GSMUA_Achr11P...	Banana	cytosol	61.08	69.91
KRH03872	Soybean	nucleus	81.19	66.74
Solyc05g013770.2.1	Tomato	nucleus	72.68	65.43
TraesCS6B01G238900.1	Wheat	cytosol	71.65	64.65
TraesCS6A01G210100.1	Wheat	cytosol	71.39	64.42
TraesCS6D01G193300.1	Wheat	cytosol	71.39	64.42
TraesCS5A01G369500.2	Wheat	cytosol	68.3	62.5
TraesCS5B01G371800.1	Wheat	cytosol	68.3	62.5
TraesCS5D01G378900.2	Wheat	cytosol, mitochondrion	68.3	62.5
KXG30551	Sorghum	cytosol	71.65	62.33
HORVU5Hr1G091970.12	Barley	cytosol, mitochondrion	68.04	62.26
KXG35096	Sorghum	cytosol	67.78	62.03
Zm00001d050970_P003	Maize	cytosol	70.88	61.66
Zm00001d017096_P005	Maize	cytosol	70.62	61.57
GSMUA_Achr3P17160_001	Banana	cytosol	70.88	61.25
Zm00001d005361_P007	Maize	cytosol, plastid	66.24	60.9
HORVU6Hr1G053760.52	Barley	cytosol	67.01	59.63
KXG37288	Sorghum	cytosol	53.87	54.57
CDY34307	Canola	plastid	77.84	41.54
CDY03422	Canola	plastid	77.58	41.4
Bra013829.1-P	Field mustard	nucleus	73.97	40.08
Solyc02g082550.2.1	Tomato	cytosol	22.42	19.51
Solyc06g051510.2.1	Tomato	cytosol	24.23	18.11
Solyc10g085720.1.1	Tomato	nucleus	24.23	17.97
Solyc09g008790.2.1	Tomato	cytosol	25.0	17.51
Solyc06g074700.2.1	Tomato	nucleus	23.71	16.64
Solyc11g066650.1.1	Tomato	nucleus	24.74	16.58
Solyc03g097350.2.1	Tomato	plastid	25.77	10.54
Solyc05g009540.2.1	Tomato	nucleus	25.77	9.95
Solyc03g098150.2.1	Tomato	nucleus	27.06	9.01
Solyc06g072340.2.1	Tomato	nucleus	26.8	8.59
CDY03423	Canola	cytosol, peroxisome, plastid	2.06	2.56
Bra013830.1-P	Field mustard	plastid	0.52	0.68

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006397
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0046777	InterPro:IPR000719	UniProt:K4BK59	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PFAM:PF07714	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF52
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc03g112050.2
EnsemblPlants:Solyc03g112050.2.1	UniParc:UPI00027692EC	:	:	:	:

Description

Serine/threonine-protein kinase AFC2 [Source:Projected from Arabidopsis thaliana (AT4G24740) UniProtKB/Swiss-Prot;Acc:P51567]

Coordinates

chr3:+:62586887..62590670

Molecular Weight (calculated)

44801.0 Da

IEP (calculated)

9.352

GRAVY (calculated)

-0.542

Length

388 amino acids

Sequence
(BLAST)

001: METERVTGFP LTNLDRRPRK RARLGWDVLP EPPKAQLGLF CGQDVGNVTS YASSRQLTDL TSAPFTIKGV AQNGSPPRRE DDKDGHFVFE LGENLTPRYK
101: IHSKMGEGTF GQVLECWDRE RKEMVAIKIV RGMKKYRDAA MIEVEMLQQL GKHDNGNRCV QIWNWFDYLM HDLRLIHTDL KPENILLISP EYVKVPDYKV
201: SSRSPKDGSY YKRIPKSSAI KVIDFGSTTY DRQNQTYVVS TRHYRAPEVI LGLGWTYPCD IWSVGCILVE LCSGEALFQT HENLEHLAMM EKVLGPLPQH
301: MLKRVDRQAE KYVRRGRLDW PEGATSRDSI RAVLKLARLQ NIIMQHVDHS AGDLINLLQG LLRYDPSERL TAREALRHPF FTRDHLRR

Best Arabidopsis Sequence Match ( AT4G24740.1 )
(BLAST)

001: MEMERVHEFP HTHMDRRPRK RARLGWDVLP QATKAQVGMF CGQEIGNISS FASSGAPSDN SSSLCVKGVA RNGSPPWRED DKDGHYIFEL GDDLTPRYKI
101: YSKMGEGTFG QVLECWDRER KEMVAVKIVR GVKKYREAAM IEIEMLQQLG KHDKGGNRCV QIRNWFDYRN HICIVFEKLG SSLYDFLRKN NYRSFPIDLV
201: REIGWQLLEC VAFMHDLRMI HTDLKPENIL LVSSDYVKIP EYKGSRLQRD VCYKRVPKSS AIKVIDFGST TYERQDQTYI VSTRHYRAPE VILGLGWSYP
301: CDVWSVGCII VELCTGEALF QTHENLEHLA MMERVLGPFP QQMLKKVDRH SEKYVRRGRL DWPDGATSRD SLKAVLKLPR LQNLIMQHVD HSAGELINMV
401: QGLLRFDPSE RITAREALRH PFFARRR

Arabidopsis Description

AFC2At4g24740 [Source:UniProtKB/TrEMBL;Acc:Q1EBU3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.