Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU6Hr1G083840.4 | |
| HORVU7Hr1G031320.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G24740.1 | HORVU6Hr1G083840.4 | AT4G31580.1 | 10593939 |
| AT4G24740.1 | HORVU7Hr1G031320.1 | AT4G31580.1 | 10593939 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G193300.1 | Wheat | cytosol | 91.06 | 92.33 |
| TraesCS6B01G238900.1 | Wheat | cytosol | 90.83 | 92.09 |
| TraesCS6A01G210100.1 | Wheat | cytosol | 90.37 | 91.63 |
| Os12t0460800-03 | Rice | cytosol | 37.39 | 86.7 |
| GSMUA_Achr8P28600_001 | Banana | cytosol | 39.45 | 79.63 |
| KXG30551 | Sorghum | cytosol | 79.59 | 77.8 |
| Zm00001d017096_P005 | Maize | cytosol | 78.67 | 77.08 |
| Zm00001d050970_P003 | Maize | cytosol | 78.21 | 76.46 |
| VIT_17s0000g09500.t01 | Wine grape | nucleus | 70.64 | 70.8 |
| KRH63654 | Soybean | nucleus | 68.12 | 69.88 |
| KRH54290 | Soybean | cytosol, nucleus | 67.66 | 69.41 |
| PGSC0003DMT400046853 | Potato | cytosol | 68.58 | 69.21 |
| KRH57157 | Soybean | cytosol | 68.12 | 69.07 |
| KXG37288 | Sorghum | cytosol | 58.95 | 67.1 |
| Solyc03g112050.2.1 | Tomato | cytosol | 59.63 | 67.01 |
| AT4G24740.1 | Thale cress | nucleus | 65.37 | 66.74 |
| VIT_01s0137g00580.t01 | Wine grape | nucleus | 65.6 | 66.2 |
| HORVU5Hr1G091970.12 | Barley | cytosol, mitochondrion | 63.53 | 65.33 |
| GSMUA_Achr3P17160_001 | Banana | cytosol | 67.2 | 65.26 |
| PGSC0003DMT400030615 | Potato | nucleus | 62.61 | 63.64 |
| KRH03872 | Soybean | nucleus | 68.58 | 63.35 |
| Solyc05g013770.2.1 | Tomato | nucleus | 62.39 | 63.11 |
| HORVU6Hr1G061750.11 | Barley | nucleus | 61.93 | 62.07 |
| HORVU3Hr1G051340.19 | Barley | golgi, plasma membrane, plastid | 55.28 | 57.38 |
| CDY34307 | Canola | plastid | 65.83 | 39.48 |
| CDY03422 | Canola | plastid | 65.6 | 39.34 |
| Bra013829.1-P | Field mustard | nucleus | 63.07 | 38.41 |
| HORVU5Hr1G002400.1 | Barley | mitochondrion | 17.66 | 28.84 |
| HORVU3Hr1G049750.1 | Barley | mitochondrion | 11.24 | 26.78 |
| HORVU4Hr1G018630.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 11.01 | 26.23 |
| HORVU1Hr1G034750.1 | Barley | cytosol | 9.4 | 25.79 |
| HORVU6Hr1G019910.4 | Barley | cytosol | 8.72 | 23.9 |
| HORVU5Hr1G087690.2 | Barley | cytosol, plastid | 25.46 | 22.42 |
| HORVU3Hr1G021690.1 | Barley | cytosol | 12.39 | 21.77 |
| HORVU1Hr1G094650.1 | Barley | nucleus | 14.68 | 21.77 |
| HORVU7Hr1G058230.1 | Barley | cytosol | 5.5 | 21.62 |
| HORVU2Hr1G091920.1 | Barley | cytosol | 14.91 | 21.45 |
| HORVU3Hr1G021740.1 | Barley | cytosol | 12.16 | 20.7 |
| HORVU7Hr1G090500.1 | Barley | cytosol | 13.99 | 20.61 |
| HORVU2Hr1G066530.1 | Barley | nucleus | 18.81 | 20.3 |
| HORVU1Hr1G082710.1 | Barley | nucleus, plastid | 19.04 | 19.71 |
| HORVU4Hr1G059640.3 | Barley | golgi, mitochondrion, plasma membrane | 16.28 | 19.67 |
| HORVU5Hr1G046420.1 | Barley | nucleus | 11.7 | 19.62 |
| HORVU5Hr1G094810.3 | Barley | nucleus | 24.08 | 18.72 |
| HORVU6Hr1G081350.5 | Barley | nucleus | 15.37 | 18.56 |
| HORVU7Hr1G121360.1 | Barley | cytosol, mitochondrion, nucleus | 13.76 | 18.07 |
| HORVU1Hr1G071160.1 | Barley | nucleus | 26.61 | 16.29 |
| HORVU2Hr1G053190.2 | Barley | cytosol | 25.0 | 14.65 |
| HORVU4Hr1G007330.12 | Barley | nucleus, plastid | 22.25 | 14.22 |
| HORVU0Hr1G016820.3 | Barley | plastid | 24.08 | 11.63 |
| HORVU5Hr1G000200.27 | Barley | cytosol, nucleus | 24.77 | 11.36 |
| HORVU6Hr1G068620.1 | Barley | nucleus | 24.31 | 11.32 |
| HORVU4Hr1G008530.1 | Barley | nucleus | 27.52 | 10.89 |
| HORVU5Hr1G000140.1 | Barley | mitochondrion | 5.73 | 4.4 |
| HORVU3Hr1G087550.7 | Barley | cytosol | 4.13 | 3.99 |
| CDY03423 | Canola | cytosol, peroxisome, plastid | 1.38 | 1.92 |
| Bra013830.1-P | Field mustard | plastid | 0.46 | 0.68 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.3.2 | Gene3D:3.30.200.20 | UniProt:A0A287U7C7 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006139 |
| GO:GO:0006397 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046777 | EnsemblPlantsGene:HORVU6Hr1G053760 | EnsemblPlants:HORVU6Hr1G053760.52 |
| InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24058 |
| PANTHER:PTHR24058:SF99 | InterPro:Prot_kinase_dom | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI000B46B481 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:337183847..337186844
Molecular Weight (calculated)
49532.0 Da
IEP (calculated)
8.969
GRAVY (calculated)
-0.367
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: GVPCRDAARA ARPPPAQAAA PWLGCRPRDP SGIPPRSGRA FAPFTLQLKK LCGEEVANAI SAMTMGLSSG GIVSSQEAQE LFRFATPPLR EDDKDGHYVF
101: AVGDNLTSRY RINAKMGEGT FGQVLECWDR ERKEMVAIKI IRGIKKYRDA AMIEIGMLEQ LCKYEKSRSS CVQIRNWFDY RNHICIVCEK LGPSLYDFLR
201: KNSYRSFPVA IVREVAKQLL ECLAFMHDLR LIHTDLKPEN ILLVSPEYIK VPDYKVSSRS PKEGSYYKRV PKSSSIKVID FGSTTYDQQD QTYVVSTRHY
301: RAPEVILGLG WSYPCDIWSV GCILVELCTG EALFQTHENL EHLAMMERVL GPLPYHMLKK ADRHGEKYVR KGRLNWPEGC ASRESMKAVM KLPRLQSAGD
401: FINLLQGLLS YDPASRLTAQ EALEHPFLME RSERRR
101: AVGDNLTSRY RINAKMGEGT FGQVLECWDR ERKEMVAIKI IRGIKKYRDA AMIEIGMLEQ LCKYEKSRSS CVQIRNWFDY RNHICIVCEK LGPSLYDFLR
201: KNSYRSFPVA IVREVAKQLL ECLAFMHDLR LIHTDLKPEN ILLVSPEYIK VPDYKVSSRS PKEGSYYKRV PKSSSIKVID FGSTTYDQQD QTYVVSTRHY
301: RAPEVILGLG WSYPCDIWSV GCILVELCTG EALFQTHENL EHLAMMERVL GPLPYHMLKK ADRHGEKYVR KGRLNWPEGC ASRESMKAVM KLPRLQSAGD
401: FINLLQGLLS YDPASRLTAQ EALEHPFLME RSERRR
001: MQSSVYRDKA SSIAMILETQ RNVEFPHRIV DKRPRKRPRL TWDAAPPLLP PPPPPTVFQP PLYYGPEFAS GLVPNFVYPN MFYNGLPRQG SPPWRPDDKD
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN
Arabidopsis Description
AFC1AT3G53570 protein [Source:UniProtKB/TrEMBL;Acc:B9DH08]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.