CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER87987
EES07659
OQU85289

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G24740.1	EER87987	AT4G31580.1	10593939
AT4G24740.1	EES07659	AT4G31580.1	10593939
AT4G24740.1	OQU85289	AT4G31580.1	10593939

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017096_P005	Maize	cytosol	94.39	94.61
Zm00001d050970_P003	Maize	cytosol	93.72	93.72
Os12t0460800-03	Rice	cytosol	36.77	87.23
TraesCS6A01G210100.1	Wheat	cytosol	82.29	85.35
TraesCS6B01G238900.1	Wheat	cytosol	82.29	85.35
TraesCS6D01G193300.1	Wheat	cytosol	82.29	85.35
GSMUA_Achr8P28600_001	Banana	cytosol	40.36	83.33
HORVU6Hr1G053760.52	Barley	cytosol	77.8	79.59
VIT_17s0000g09500.t01	Wine grape	nucleus	73.54	75.4
KRH57157	Soybean	cytosol	71.52	74.19
KXG37288	Sorghum	cytosol	63.68	74.15
PGSC0003DMT400046853	Potato	cytosol	71.75	74.07
KRH63654	Soybean	nucleus	70.4	73.88
KRH54290	Soybean	cytosol, nucleus	69.96	73.41
Solyc03g112050.2.1	Tomato	cytosol	62.33	71.65
AT4G24740.1	Thale cress	nucleus	68.16	71.19
VIT_01s0137g00580.t01	Wine grape	nucleus	68.61	70.83
GSMUA_Achr3P17160_001	Banana	cytosol	69.73	69.27
KXG33666	Sorghum	cytosol	66.82	68.66
KRH03872	Soybean	nucleus	71.97	68.01
Solyc05g013770.2.1	Tomato	nucleus	65.25	67.52
PGSC0003DMT400030615	Potato	nucleus	64.8	67.37
KXG35096	Sorghum	cytosol	63.68	66.98
EES00987	Sorghum	mitochondrion	55.83	64.51
CDY34307	Canola	plastid	68.39	41.95
CDY03422	Canola	plastid	68.16	41.82
Bra013829.1-P	Field mustard	nucleus	65.7	40.92
EER99321	Sorghum	cytosol	24.66	25.94
EER93458	Sorghum	nucleus	26.01	20.46
OQU78157	Sorghum	nucleus, plastid	26.01	17.9
OQU80322	Sorghum	nucleus	24.22	17.59
EES01706	Sorghum	nucleus	26.46	16.37
EER99364	Sorghum	cytosol	25.78	15.6
KXG24155	Sorghum	nucleus	27.58	12.87
KXG27048	Sorghum	nucleus	25.11	12.21
EES05664	Sorghum	nucleus	24.66	11.7
KXG37702	Sorghum	nucleus	28.7	11.63
CDY03423	Canola	cytosol, peroxisome, plastid	1.57	2.24
Bra013830.1-P	Field mustard	plastid	0.45	0.68

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.2	Gene3D:3.30.200.20	UniProt:A0A194YQT0	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	EnsemblPlants:KXG30551	ProteinID:KXG30551	ProteinID:KXG30551.1	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF99	InterPro:Prot_kinase_dom
SMART:SM00220	EnsemblPlantsGene:SORBI_3004G202500	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0007F2B7EB	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:55461617..55464923

Molecular Weight (calculated)

51077.7 Da

IEP (calculated)

8.043

GRAVY (calculated)

-0.403

Length

446 amino acids

Sequence
(BLAST)

001: MECIAEMPRA PLDSRPRKRQ RLGWDVGPAE MYQVTRPRLG WDVGPAEMYQ LGLCGQEVVN AISAAALGLS SGCVSSQVNQ EQPRDGSPPL REDDKDGHYV
101: FAVGDNLTSR YKIIAKMGEG TFGQVLECWD KERKEMVAIK IIRGIKKYRD AAMIEIGMLE QLGKYDESRS SCVQIRNWFD YRNHICIVFE RLGPSLYDFL
201: KKNNYRSFPI ALVREIAKQL LECIAFMHEL RLIHTDLKPE NILLVSPEYI KVPDYKVSSR SPKEGSYYKR LPKSSAIKVI DFGSTTYDQQ DQSYVVSTRH
301: YRAPEVILGL GWSYPCDIWS VGCILVELCT GEALFQTHEN LEHLAMMERV LGPLPYHMLK RADRHSDKYI RKGRLNWPEG CTSRESMKAV MKLSRLQNLV
401: MQNVDQAAGD FIDLLQGLLK YDSADRLTAE EALRHPFFTE GFGQRR

Best Arabidopsis Sequence Match ( AT4G24740.1 )
(BLAST)

001: MEMERVHEFP HTHMDRRPRK RARLGWDVLP QATKAQVGMF CGQEIGNISS FASSGAPSDN SSSLCVKGVA RNGSPPWRED DKDGHYIFEL GDDLTPRYKI
101: YSKMGEGTFG QVLECWDRER KEMVAVKIVR GVKKYREAAM IEIEMLQQLG KHDKGGNRCV QIRNWFDYRN HICIVFEKLG SSLYDFLRKN NYRSFPIDLV
201: REIGWQLLEC VAFMHDLRMI HTDLKPENIL LVSSDYVKIP EYKGSRLQRD VCYKRVPKSS AIKVIDFGST TYERQDQTYI VSTRHYRAPE VILGLGWSYP
301: CDVWSVGCII VELCTGEALF QTHENLEHLA MMERVLGPFP QQMLKKVDRH SEKYVRRGRL DWPDGATSRD SLKAVLKLPR LQNLIMQHVD HSAGELINMV
401: QGLLRFDPSE RITAREALRH PFFARRR

Arabidopsis Description

AFC2At4g24740 [Source:UniProtKB/TrEMBL;Acc:Q1EBU3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.