Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0000g09500.t01 | Wine grape | nucleus | 87.12 | 85.52 |
| KRH63654 | Soybean | nucleus | 84.31 | 84.71 |
| KRH54290 | Soybean | cytosol, nucleus | 83.37 | 83.76 |
| KRH57157 | Soybean | cytosol | 84.31 | 83.72 |
| PGSC0003DMT400046853 | Potato | cytosol | 81.26 | 80.32 |
| Solyc03g112050.2.1 | Tomato | cytosol | 71.43 | 78.61 |
| GSMUA_Achr11P... | Banana | cytosol | 62.3 | 78.47 |
| KRH03872 | Soybean | nucleus | 85.01 | 76.91 |
| Os12t0460800-03 | Rice | cytosol | 33.26 | 75.53 |
| GSMUA_Achr8P28600_001 | Banana | cytosol | 37.0 | 73.15 |
| TraesCS6A01G210100.1 | Wheat | cytosol | 70.73 | 70.23 |
| TraesCS6B01G238900.1 | Wheat | cytosol | 70.73 | 70.23 |
| TraesCS6D01G193300.1 | Wheat | cytosol | 70.73 | 70.23 |
| TraesCS5A01G369500.2 | Wheat | cytosol | 68.62 | 69.1 |
| TraesCS5B01G371800.1 | Wheat | cytosol | 68.62 | 69.1 |
| TraesCS5D01G378900.2 | Wheat | cytosol, mitochondrion | 68.62 | 69.1 |
| HORVU5Hr1G091970.12 | Barley | cytosol, mitochondrion | 68.62 | 69.1 |
| KXG35096 | Sorghum | cytosol | 67.92 | 68.4 |
| KXG30551 | Sorghum | cytosol | 71.19 | 68.16 |
| GSMUA_Achr3P17160_001 | Banana | cytosol | 71.19 | 67.71 |
| Zm00001d005361_P007 | Maize | cytosol, plastid | 66.51 | 67.3 |
| Zm00001d017096_P005 | Maize | cytosol | 69.79 | 66.97 |
| Zm00001d050970_P003 | Maize | cytosol | 69.56 | 66.59 |
| HORVU6Hr1G053760.52 | Barley | cytosol | 66.74 | 65.37 |
| AT3G53570.1 | Thale cress | cytosol | 69.56 | 63.6 |
| AT4G32660.1 | Thale cress | nucleus | 56.44 | 60.25 |
| KXG37288 | Sorghum | cytosol | 53.16 | 59.27 |
| CDY03422 | Canola | plastid | 95.32 | 55.98 |
| CDY34307 | Canola | plastid | 95.08 | 55.85 |
| Bra013829.1-P | Field mustard | nucleus | 91.1 | 54.33 |
| AT2G17530.1 | Thale cress | cytosol | 26.23 | 25.45 |
| AT4G35500.2 | Thale cress | cytosol | 25.53 | 24.83 |
| AT3G53030.1 | Thale cress | nucleus | 26.7 | 21.55 |
| AT5G22840.1 | Thale cress | nucleus | 26.46 | 21.0 |
| AT3G44850.1 | Thale cress | nucleus | 26.0 | 20.79 |
| AT2G40120.1 | Thale cress | cytosol | 26.0 | 19.47 |
| AT3G53640.1 | Thale cress | cytosol | 26.93 | 17.91 |
| AT1G13350.3 | Thale cress | nucleus | 26.7 | 13.67 |
| AT5G35980.1 | Thale cress | nucleus | 27.17 | 12.13 |
| AT3G25840.1 | Thale cress | nucleus | 26.0 | 11.87 |
| AT3G17750.1 | Thale cress | nucleus | 29.27 | 10.98 |
| AT1G73450.1 | Thale cress | nucleus | 29.04 | 10.76 |
| AT1G73460.2 | Thale cress | nucleus | 28.81 | 10.52 |
| CDY03423 | Canola | cytosol, peroxisome, plastid | 1.64 | 2.24 |
| Bra013830.1-P | Field mustard | plastid | 0.47 | 0.68 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.3.2 | Gene3D:3.30.200.20 | EntrezGene:828576 | ProteinID:AEE84951.1 | Symbol:AFC2 |
| EMBL:AK227055 | ProteinID:ANM67268.1 | ArrayExpress:AT4G24740 | EnsemblPlantsGene:AT4G24740 | RefSeq:AT4G24740 | TAIR:AT4G24740 |
| RefSeq:AT4G24740-TAIR-G | EnsemblPlants:AT4G24740.1 | TAIR:AT4G24740.1 | Unigene:At.73921 | EMBL:BT025991 | ProteinID:CAA22989.1 |
| ProteinID:CAB79384.1 | EMBL:D45353 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0004674 | GO:GO:0004712 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006139 |
| GO:GO:0006397 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046777 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | RefSeq:NP_001329107.1 | RefSeq:NP_194205.1 | UniProt:P51567 | PFAM:PF00069 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24058 |
| PANTHER:PTHR24058:SF52 | InterPro:Prot_kinase_dom | UniProt:Q1EBU3 | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| EMBL:U16177 | UniParc:UPI0000125660 | SEG:seg | : | : | : |
Description
AFC2At4g24740 [Source:UniProtKB/TrEMBL;Acc:Q1EBU3]
Coordinates
chr4:-:12754489..12757866
Molecular Weight (calculated)
49568.9 Da
IEP (calculated)
9.028
GRAVY (calculated)
-0.492
Length
427 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMERVHEFP HTHMDRRPRK RARLGWDVLP QATKAQVGMF CGQEIGNISS FASSGAPSDN SSSLCVKGVA RNGSPPWRED DKDGHYIFEL GDDLTPRYKI
101: YSKMGEGTFG QVLECWDRER KEMVAVKIVR GVKKYREAAM IEIEMLQQLG KHDKGGNRCV QIRNWFDYRN HICIVFEKLG SSLYDFLRKN NYRSFPIDLV
201: REIGWQLLEC VAFMHDLRMI HTDLKPENIL LVSSDYVKIP EYKGSRLQRD VCYKRVPKSS AIKVIDFGST TYERQDQTYI VSTRHYRAPE VILGLGWSYP
301: CDVWSVGCII VELCTGEALF QTHENLEHLA MMERVLGPFP QQMLKKVDRH SEKYVRRGRL DWPDGATSRD SLKAVLKLPR LQNLIMQHVD HSAGELINMV
401: QGLLRFDPSE RITAREALRH PFFARRR
101: YSKMGEGTFG QVLECWDRER KEMVAVKIVR GVKKYREAAM IEIEMLQQLG KHDKGGNRCV QIRNWFDYRN HICIVFEKLG SSLYDFLRKN NYRSFPIDLV
201: REIGWQLLEC VAFMHDLRMI HTDLKPENIL LVSSDYVKIP EYKGSRLQRD VCYKRVPKSS AIKVIDFGST TYERQDQTYI VSTRHYRAPE VILGLGWSYP
301: CDVWSVGCII VELCTGEALF QTHENLEHLA MMERVLGPFP QQMLKKVDRH SEKYVRRGRL DWPDGATSRD SLKAVLKLPR LQNLIMQHVD HSAGELINMV
401: QGLLRFDPSE RITAREALRH PFFARRR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.