Factsheet for AT3G17750.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079686	Potato	cytosol	23.02	90.97
PGSC0003DMT400069308	Potato	golgi, vacuole	27.42	85.71
CDX92157	Canola	nucleus	75.92	84.54
Bra022240.1-P	Field mustard	nucleus	76.89	84.22
CDX95825	Canola	nucleus	76.45	83.02
Os03t0719500-02	Rice	cytosol, nucleus	38.93	65.92
KRH60590	Soybean	nucleus	56.33	58.33
KRH38978	Soybean	nucleus	59.14	57.47
KRH09504	Soybean	nucleus	59.49	57.42
Solyc03g098150.2.1	Tomato	nucleus	58.26	56.91
GSMUA_Achr3P02060_001	Banana	nucleus	49.38	56.54
GSMUA_Achr2P21700_001	Banana	nucleus	54.57	55.9
KXG37702	Sorghum	nucleus	53.16	54.95
KRH41895	Soybean	nucleus	53.95	54.92
HORVU4Hr1G008530.1	Barley	nucleus	53.16	54.9
TraesCS4B01G051900.1	Wheat	nucleus	53.08	54.61
TraesCS4A01G263100.1	Wheat	nucleus	52.9	54.48
AT1G73450.1	Thale cress	nucleus	55.1	54.43
TraesCS4D01G052100.1	Wheat	nucleus	52.9	54.33
AT1G73460.2	Thale cress	nucleus	55.8	54.32
GSMUA_Achr11P...	Banana	nucleus	51.76	53.69
Zm00001d013405_P004	Maize	nucleus	51.85	52.49
Solyc06g072340.2.1	Tomato	nucleus	55.71	52.35
Zm00001d033798_P030	Maize	mitochondrion	52.72	51.81
AT2G40120.1	Thale cress	cytosol	24.69	49.3
GSMUA_Achr7P11320_001	Banana	nucleus	51.67	45.72
PGSC0003DMT400079685	Potato	nucleus	32.07	41.81
VIT_01s0011g01590.t01	Wine grape	mitochondrion	60.11	37.75
AT4G24740.1	Thale cress	nucleus	10.98	29.27
AT4G32660.1	Thale cress	nucleus	9.93	28.25
AT2G17530.1	Thale cress	cytosol	10.02	25.91
AT3G53570.1	Thale cress	cytosol	10.02	24.41
AT4G35500.2	Thale cress	cytosol	9.31	24.15
AT5G22840.1	Thale cress	nucleus	10.02	21.19
AT3G53030.1	Thale cress	nucleus	9.67	20.79
AT3G44850.1	Thale cress	nucleus	9.4	20.04
AT3G53640.1	Thale cress	cytosol	11.07	19.63
AT1G13350.3	Thale cress	nucleus	12.21	16.67
AT3G25840.1	Thale cress	nucleus	13.36	16.26
AT5G35980.1	Thale cress	nucleus	12.57	14.96

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.3	Gene3D:3.30.200.20	EntrezGene:821043	ProteinID:AEE76002.1	ArrayExpress:AT3G17750
EnsemblPlantsGene:AT3G17750	RefSeq:AT3G17750	TAIR:AT3G17750	RefSeq:AT3G17750-TAIR-G	EnsemblPlants:AT3G17750.1	TAIR:AT3G17750.1
EMBL:AY090239	Unigene:At.38663	EMBL:BT003031	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	RefSeq:NP_188402.1	PFAM:PF00069
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058
PANTHER:PTHR24058:SF23	InterPro:Prot_kinase_dom	UniProt:Q8RX85	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000000BEA0	SEG:seg	:	:	:	:

Description

AT3g17750/MIG5_4 [Source:UniProtKB/TrEMBL;Acc:Q8RX85]

Coordinates

chr3:+:6073731..6078748

Molecular Weight (calculated)

127246.0 Da

IEP (calculated)

4.588

GRAVY (calculated)

-0.607

Length

1138 amino acids

Sequence
(BLAST)

0001: MEDSSSIDSI LEFLRKNHFM RAEAALISEL SKKPSSNGSL QKLNFEDNCV SKLLDKKKQG GSSQALGLHN DSHISDELVV KEIQCGAANN LHESNLMNDV
0101: SVQTQSGNAD FWEERFTFAE GFEDTELDLP PWNHTSTDIV ADSEEYSINP SKRGFVNPRS SKQSSHEKVP EPGKSNKVVV EDVFSSFEKI RTGSSSQVSQ
0201: YDHGKACQSL EVDNKVGNSA IQEGFVTTSW SRSEENIGAS PDHWKDCSVT TVFPLSKGST STKDNGVAIL DKWQGKKLVG ASDSRILIKE QEDDVATALY
0301: LGKSQSGYEH KIPSSLAFSL AHDAPREDLP RLPHVKIKSE DKLMNFTWEE KHERDILDEK LINTDNAFLL GSYLDVPIGQ EINSSGGKMA GGGNWLSVSH
0401: GIADDASDLI FGFGDGLGAL NEHSNEYWDS DEYDDDDDVG YIRQPIEDEA WFLGHEVDYP SDNEKGTEHG SVPDTQDKSQ TKNDDDHSFA EEDSYFSGEQ
0501: YVLAKGIEPV TASNDPMGLS MTETYSTTKQ ADLVARYDGQ LMDAEELSLM DTEPVWKGFV SHENDVILLK KGKVEDNSGR ICRKDIRAED DRNAAVRSIG
0601: VGMSDDVDDN GSIIPEYFPG EGSEWDLELL PYRGVGVAGV KPPPGKGASM LLKNFADGGF SFPSPVADRQ KSQDDSANPE WSNHCDAVVR NESDEPKGLI
0701: QSDSMIVSST KRCSGSSSER NLRDMDDEKV ASSRNSSPSA LSHSSDTGRE HKEEDEEETS HGPEEDPGTS FEDEDAIVVQ EQVRQIQAQE QDFETFNLKI
0801: VHRKNRTGFE EDKNFHVVLN SVIAGRYHVT EHLGSAAFSK AIQAHDLHTG IDVCVKIIKN NKDFFDQSLD EIKLLKYVNQ HDPADKYHLL RLYDYFYFRE
0901: HLLIVCELLK ANLYEFQKFN RESGGEVYFT MPRLQSITIQ CLEALNFLHG LGLIHCDLKP ENILIKSYSR CEIKVIDLGS SCFETDHLCS YVQSRSYRAP
1001: EVILGLPYDK KIDIWSLGCI LAELCTGNVL FQNDSPATLL ARVIGIIGSI DQEMLAKGRD TCKYFTKNHL LYERNQESNN LEYLIPKKSS LRRRLPMGDQ
1101: GFIDFVAYLL QVDPKKRPSA FEALKHPWLT YPYEPISA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.